FFCP PHASE1:Mm9::chr15:79570004..79570024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000162186_5end | |association_with_transcript=0bp_to_ENSMUST00000162186_5end | ||
|cluster_id=chr15:79570004..79570024,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000162186_5end | |description=CAGE_peak_1_at_ENSMUST00000162186_5end | ||
|id=chr15:79570004..79570024,+ | |id=chr15:79570004..79570024,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.04e-11!12;CL:0000084!1.33e-10!11;CL:0000827!1.33e-10!11;CL:0000542!2.56e-10!13;CL:0000051!2.56e-10!13;CL:0000791!1.49e-08!9;CL:0000789!1.49e-08!9;CL:0002420!1.49e-08!9;CL:0002419!1.49e-08!9;CL:0000790!1.49e-08!9;CL:0002031!2.35e-08!25;CL:0000624!2.00e-07!8;CL:0000738!3.06e-07!17;CL:0002087!3.06e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.88e-07,9;CL:0000789,4.88e-07,9;CL:0002420,4.88e-07,9;CL:0002419,4.88e-07,9;CL:0000790,4.88e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-13,3;DOID:4045,1.12e-13,3;DOID:0050686,4.69e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.72e-22!29;UBERON:0003408!5.38e-19!24;UBERON:0005057!1.35e-18!51;UBERON:0002193!5.28e-18!48;UBERON:0002370!6.19e-18!23;UBERON:0000974!6.19e-18!23;UBERON:0004807!6.19e-18!23;UBERON:0005058!6.19e-18!23;UBERON:0003351!6.19e-18!23;UBERON:0009113!6.19e-18!23;UBERON:0003295!6.19e-18!23;UBERON:0009722!6.19e-18!23;UBERON:0005562!6.19e-18!23;UBERON:0007690!6.19e-18!23;UBERON:0002405!1.11e-17!70;UBERON:0006562!6.18e-17!24;UBERON:0001557!6.18e-17!24;UBERON:0001042!6.18e-17!24;UBERON:0008814!6.18e-17!24;UBERON:0009145!6.18e-17!24;UBERON:0002390!1.03e-16!45;UBERON:0003061!1.03e-16!45;UBERON:0000072!2.16e-14!27;UBERON:0001004!2.52e-11!42;UBERON:0001041!4.85e-11!92;UBERON:0000063!6.46e-11!35;UBERON:0000490!9.00e-11!66;UBERON:0003929!1.06e-10!55;UBERON:0000065!1.58e-10!41;UBERON:0000077!6.21e-10!97;UBERON:0005911!2.82e-09!69;UBERON:0002368!3.50e-09!60;UBERON:0002530!8.86e-09!65;UBERON:0003104!1.26e-08!131;UBERON:0009142!1.26e-08!131;UBERON:0003081!1.43e-08!88;UBERON:0001007!2.31e-07!128;UBERON:0001555!2.31e-07!128;UBERON:0007026!2.31e-07!128;UBERON:0004119!4.36e-07!130;UBERON:0000925!4.36e-07!130;UBERON:0006595!4.36e-07!130;UBERON:0000949!4.50e-07!72;UBERON:0004921!4.72e-07!126;UBERON:0004185!4.72e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.25e-19,23;UBERON:0000974,2.25e-19,23;UBERON:0004807,2.25e-19,23;UBERON:0005058,2.25e-19,23;UBERON:0003351,2.25e-19,23;UBERON:0009113,2.25e-19,23;UBERON:0003295,2.25e-19,23;UBERON:0009722,2.25e-19,23;UBERON:0005562,2.25e-19,23;UBERON:0007690,2.25e-19,23;UBERON:0006562,1.71e-18,24;UBERON:0003408,1.71e-18,24;UBERON:0001557,1.71e-18,24;UBERON:0001042,1.71e-18,24;UBERON:0008814,1.71e-18,24;UBERON:0009145,1.71e-18,24;UBERON:0004177,5.76e-18,29;UBERON:0005057,5.76e-18,29;UBERON:0000072,3.07e-16,27;UBERON:0000077,1.53e-14,35;UBERON:0002193,7.27e-12,48;UBERON:0002405,7.27e-12,48;UBERON:0007811,9.93e-12,36;UBERON:0000490,2.66e-11,66;UBERON:0002390,7.37e-11,45;UBERON:0003061,7.37e-11,45;UBERON:0000065,4.45e-10,41;UBERON:0001004,8.54e-10,42;UBERON:0000153,1.59e-09,43;UBERON:0003929,1.79e-08,55;UBERON:0002368,1.34e-07,60;UBERON:0002530,7.38e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0,0.239316476986009,1.36960583944965,1.57356724354195,0.333109761815663,0.607425802169478,0,0.630924330716475,0.685572168028694,0,0,0.496454756004426,0.783599367416806,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,41.8531630736908,22.6587249911902,32.9819958703493,127.64623290273,55.3266842816341,49.5220560091777,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,1.85194527369712,0.753473828018764,0.410082683163076,0.228778173206523,0,0.839708713941948,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.16011120628178,0.405450430580328,0.410843828659309,0.77952493786677,0.537080087002444,0.596044064343795,1.44234539423963,2.06765338044408,3.12995994839258,2.057583779685,1.41156659191577,1.55932609183604,2.50150788264857,3.03879945672079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0,0.239316476986009,1.36960583944965,1.57356724354195,0.333109761815663,0.607425802169478,0,0.630924330716475,0.685572168028694,0,0,0.496454756004426,0.783599367416806,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,41.8531630736908,22.6587249911902,32.9819958703493,127.64623290273,55.3266842816341,49.5220560091777,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,1.85194527369712,0.753473828018764,0.410082683163076,0.228778173206523,0,0.839708713941948,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.16011120628178,0.405450430580328,0.410843828659309,0.77952493786677,0.537080087002444,0.596044064343795,1.44234539423963,2.06765338044408,3.12995994839258,2.057583779685,1.41156659191577,1.55932609183604,2.50150788264857,3.03879945672079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000162186 | |short_description=p1@ENSMUST00000162186 | ||
}} | }} |
Latest revision as of 15:31, 5 August 2015
Short description: | p1@ENSMUST00000162186 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000162186_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 0bp_to_ENSMUST00000162186_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.88e-07 | 9 |
alpha-beta T cell | 4.88e-07 | 9 |
immature T cell | 4.88e-07 | 9 |
mature T cell | 4.88e-07 | 9 |
immature alpha-beta T cell | 4.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.25e-19 | 23 |
neck | 2.25e-19 | 23 |
respiratory system epithelium | 2.25e-19 | 23 |
hemolymphoid system gland | 2.25e-19 | 23 |
pharyngeal epithelium | 2.25e-19 | 23 |
thymic region | 2.25e-19 | 23 |
pharyngeal gland | 2.25e-19 | 23 |
entire pharyngeal arch endoderm | 2.25e-19 | 23 |
thymus primordium | 2.25e-19 | 23 |
early pharyngeal endoderm | 2.25e-19 | 23 |
pharynx | 1.71e-18 | 24 |
gland of gut | 1.71e-18 | 24 |
upper respiratory tract | 1.71e-18 | 24 |
chordate pharynx | 1.71e-18 | 24 |
pharyngeal arch system | 1.71e-18 | 24 |
pharyngeal region of foregut | 1.71e-18 | 24 |
hemopoietic organ | 5.76e-18 | 29 |
immune organ | 5.76e-18 | 29 |
segment of respiratory tract | 3.07e-16 | 27 |
mixed endoderm/mesoderm-derived structure | 1.53e-14 | 35 |
hemolymphoid system | 7.27e-12 | 48 |
immune system | 7.27e-12 | 48 |
craniocervical region | 9.93e-12 | 36 |
unilaminar epithelium | 2.66e-11 | 66 |
hematopoietic system | 7.37e-11 | 45 |
blood island | 7.37e-11 | 45 |
respiratory tract | 4.45e-10 | 41 |
respiratory system | 8.54e-10 | 42 |
anterior region of body | 1.59e-09 | 43 |
gut epithelium | 1.79e-08 | 55 |
endocrine gland | 1.34e-07 | 60 |
gland | 7.38e-07 | 65 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.12e-13 | 3 |
muscle cancer | 1.12e-13 | 3 |
organ system cancer | 4.69e-07 | 6 |