FFCP PHASE1:Hg19::chr10:91061978..91061990,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:91061978..91061990,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:91061978..91061990,+ | |description=CAGE_peak_at_chr10:91061978..91061990,+ | ||
|id=chr10:91061978..91061990,+ | |id=chr10:91061978..91061990,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.67e-35!42;CL:0000860!1.24e-32!45;CL:0002194!1.47e-21!63;CL:0000576!1.47e-21!63;CL:0000040!1.47e-21!63;CL:0000559!1.47e-21!63;CL:0002009!9.12e-21!65;CL:0000839!5.59e-19!70;CL:0000557!1.19e-18!71;CL:0000766!3.84e-17!76;CL:0002087!4.18e-16!119;CL:0002031!3.11e-15!124;CL:0000738!7.27e-13!140;CL:0000763!2.95e-10!112;CL:0000049!2.95e-10!112;CL:0002032!4.29e-10!165;CL:0000837!4.29e-10!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000988!1.18e-08!182;CL:0000134!6.85e-07!358 | |ontology_enrichment_celltype=CL:0002057!2.67e-35!42;CL:0000860!1.24e-32!45;CL:0002194!1.47e-21!63;CL:0000576!1.47e-21!63;CL:0000040!1.47e-21!63;CL:0000559!1.47e-21!63;CL:0002009!9.12e-21!65;CL:0000839!5.59e-19!70;CL:0000557!1.19e-18!71;CL:0000766!3.84e-17!76;CL:0002087!4.18e-16!119;CL:0002031!3.11e-15!124;CL:0000738!7.27e-13!140;CL:0000763!2.95e-10!112;CL:0000049!2.95e-10!112;CL:0002032!4.29e-10!165;CL:0000837!4.29e-10!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000988!1.18e-08!182;CL:0000134!6.85e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.88e-43;33!CL:0002057;1.88e-43;33!CL:0000473;6.66e-27;39!CL:0000234;6.66e-27;39!CL:0000576;1.61e-18;48!CL:0000766;5.86e-12;69!CL:0002087;9.29e-11;104!CL:0000763;1.95e-09;100!CL:0000632;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.92e-38,42;CL:0002057,9.92e-38,42;CL:0000473,5.43e-33,48;CL:0000234,5.43e-33,48;CL:0002194,2.39e-26,59;CL:0000576,2.39e-26,59;CL:0000040,2.39e-26,59;CL:0000559,2.39e-26,59;CL:0002009,1.72e-25,61;CL:0000839,1.44e-23,66;CL:0000557,3.23e-23,67;CL:0000766,1.31e-21,72;CL:0000763,2.35e-14,108;CL:0000049,2.35e-14,108;CL:0002087,1.83e-13,115;CL:0002031,6.87e-13,120;CL:0000738,2.48e-11,136;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177;CL:0000632,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.62e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.10e-18!80;UBERON:0001474!2.26e-16!86;UBERON:0004765!8.97e-15!101;UBERON:0001434!8.97e-15!101;UBERON:0002390!1.14e-14!102;UBERON:0003061!1.14e-14!102;UBERON:0002193!6.22e-13!112;UBERON:0002405!1.75e-12!115;UBERON:0002204!5.85e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-20,76;UBERON:0001474,5.75e-19,82;UBERON:0004765,2.87e-17,90;UBERON:0002405,1.05e-16,93;UBERON:0002390,7.63e-16,98;UBERON:0003061,7.63e-16,98;UBERON:0001434,1.60e-15,100;UBERON:0002193,2.35e-14,108;UBERON:0002204,3.78e-09,167;UBERON:0003081,1.95e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0,0,0,3.97909060082173,3.20929027076094,1.27867425159808,0.989553900560148,0.398927315243264,0.852449501065388,22.9265298516581,9.64554881974938,9.9651559839292,0.502497330513487,0,0.65156653411535,24.2159801053348,26.1477121551171,27.8486900947978,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0,0,0,3.97909060082173,3.20929027076094,1.27867425159808,0.989553900560148,0.398927315243264,0.852449501065388,22.9265298516581,9.64554881974938,9.9651559839292,0.502497330513487,0,0.65156653411535,24.2159801053348,26.1477121551171,27.8486900947978,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:91061978..91061990,+ | |short_description=p@chr10:91061978..91061990,+ | ||
}} | }} |
Latest revision as of 16:36, 23 July 2015
Short description: | p@chr10:91061978..91061990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91061978..91061990, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.92e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-38 | 42 |
defensive cell | 5.43e-33 | 48 |
phagocyte | 5.43e-33 | 48 |
monopoietic cell | 2.39e-26 | 59 |
monocyte | 2.39e-26 | 59 |
monoblast | 2.39e-26 | 59 |
promonocyte | 2.39e-26 | 59 |
macrophage dendritic cell progenitor | 1.72e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.44e-23 | 66 |
granulocyte monocyte progenitor cell | 3.23e-23 | 67 |
myeloid leukocyte | 1.31e-21 | 72 |
myeloid cell | 2.35e-14 | 108 |
common myeloid progenitor | 2.35e-14 | 108 |
nongranular leukocyte | 1.83e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.87e-13 | 120 |
leukocyte | 2.48e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
hepatic stellate cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-20 | 76 |
bone element | 5.75e-19 | 82 |
skeletal element | 2.87e-17 | 90 |
immune system | 1.05e-16 | 93 |
hematopoietic system | 7.63e-16 | 98 |
blood island | 7.63e-16 | 98 |
skeletal system | 1.60e-15 | 100 |
hemolymphoid system | 2.35e-14 | 108 |
musculoskeletal system | 3.78e-09 | 167 |
lateral plate mesoderm | 1.95e-07 | 203 |