Personal tools

FFCP PHASE1:Mm9::chr13:37918486..37918575,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68750
|EntrezGene=68750
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3UH06
|UniProt=Q3UH06
|association_with_transcript=-205bp_to_NM_001177868,NR_033615,uc007qcx.2,uc007qcy.2_5end
|association_with_transcript=-205bp_to_NM_001177868,NR_033615,uc007qcx.2,uc007qcy.2_5end
|cluster_id=chr13:37918486..37918575,+
|description=CAGE_peak_2_at_Rreb1_5end
|description=CAGE_peak_2_at_Rreb1_5end
|id=chr13:37918486..37918575,+
|id=chr13:37918486..37918575,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005153!2.32e-08!17;UBERON:0002048!2.14e-07!14;UBERON:0000117!2.14e-07!14;UBERON:0000171!2.14e-07!14;UBERON:0000170!2.14e-07!14;UBERON:0005597!2.14e-07!14;UBERON:0000118!2.14e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.31e-08,17;UBERON:0002048,2.13e-07,14;UBERON:0000117,2.13e-07,14;UBERON:0000171,2.13e-07,14;UBERON:0000170,2.13e-07,14;UBERON:0005597,2.13e-07,14;UBERON:0000118,2.13e-07,14
|phase1_expression=2.40223270657191,8.37540978334467,8.64498554840118,10.8887116070459,8.5152274090879,3.86122325397347,4.67225281191051,2.58246646883153,0.140788722151667,1.40438715793196,1.19852577757853,0.478632953972018,2.05440875917447,1.66098764596095,2.33176833270964,1.82227740650843,0.699561878128147,1.26184866143295,2.4680598049033,2.12194825899015,5.78294373027274,4.17021995043718,3.13439746966722,3.67982572424835,4.35877634027623,1.72269589234506,6.46142994238612,6.03319451520489,5.32065574477847,4.78857246543868,2.43903561720835,1.90509202037889,1.23012957516914,0,1.1554064790051,2.1610503896604,2.24586291888606,13.393012183581,6.2506827561904,10.9939986234498,22.9410280332096,15.7100461540443,12.62326917881,3.27331726736501,1.82478476195126,2.9367480345869,6.25913075478431,1.96222640742402,2.19686182734472,3.69416808241138,2.79972843250725,1.43752564364972,0.838913030288682,1.45072428402269,1.68046899571232,2.57259436035947,6.01720223871389,3.09403255366465,0.809265843438391,0,1.90149421051854,1.35537812827653,5.33576877666684,4.94944844504769,7.9109309005358,7.8152812644071,5.39280198933128,3.45796474789399,0.829516898467821,0.405017814995072,0.630974884054146,1.14260393761521,3.3130281142742,0.61245399607477,0.766763768145891,0,1.10115880999389,1.65993539510744,0.921639199537461,0.923204014111357,1.37231465403614,1.04182674111352,1.95428099300967,1.12552522006336,3.36156145108982,2.35702868378934,2.27794689278565,0.931997229126503,2.19605960666234,4.91215140694106,19.7107852317141,2.58127163094416,2.03991400112325,7.55584468292944,11.0461990966104,9.40856462904405,5.33688796500657,2.38602451609281,2.33807404142582,2.47337702157238,1.40843419776681,3.84979432242953,10.1922095882658,7.11066703153331,3.46385665617943,4.05375784760158,2.52762222507392,4.79572294820052,9.06282592765101,8.46120192669501,6.41895709034703,6.69824052286711,4.38169444786511,6.0289056221049,7.2904998424137,7.79132866243988,7.16865406429684,15.1829324765907,7.07688441559899,6.14714029800155,7.95029466457417,4.84875253135222,11.1835056730873,3.80615036115011,1.67557365450764,6.13096932500619,1.43778149407104,1.79970819298022,3.17675567682662,1.49790639404823,4.11750542536764,0.879580464790051,2.78118912307642,2.30143911597297,2.90903262383384,4.05603157669394,3.56437773476107,8.70848794270651,9.60346482047964,20.6233018768745,2.08192708740326,1.60931473103431,2.52086981727489,3.76762044589288,4.150226448231,7.43059577652129,6.93392761741993,12.4177617954728,3.66465587985832,3.78212160335639,4.57472922826267,4.3839146485515,6.39508673218875,7.66154766348766,10.0833246839892,6.96619933864726,2.1066395619397,2.83082697826187,2.27330799516474,3.31401236056803,4.45599513964083,3.96136535214233,4.49814997611899,5.3126342571799,5.707883176833,3.72054311600653,5.633741429392,5.3712057488898,5.43047504714485,7.55170334763838,8.18794976413143,7.16379938384128,7.24515380460467,6.1734952629771,5.67782861123144,0.411618449517138,15.1992640172547,14.0158800331678,2.55945900642281,3.94802342162745,4.63922860759536,5.24377164020691,4.66993892074228,5.1360919050391,9.01605216934572,7.24675400785648,5.52937459360593,5.17286827306992,5.8489226135736,4.49409704327111,5.83572734661674,5.17767310461355,2.65535061334314,3.31320686568214,3.38123207019241,5.7022371796688,4.26695471768777,4.06787755363848,6.19718063817721,5.75679577120448,4.55296310739987,2.83813477020141,7.41131567717872,3.33690211432188,2.75182593158484,2.9232074610031,3.85434230638156,3.37648023653384,4.83789118384698,7.76779571117189,3.89124544260085,5.21666685057355,7.18841032636773,3.72140947668503,5.61667811606209,6.81962970457202,3.22915344339442,2.41221760681684,17.9210594461607,3.60033682363921,5.21487924614483,8.99648954608497,11.2651319178481,19.9332446355761,18.8054476299951,17.3668946593441,12.7684466726015,12.6234873099802,16.9022054776936,23.2685906896348,12.4333186943445,14.7542039753142,3.01582567878545,5.98296252200581,28.5223278351041,28.1455481230827,1.28440471990234,1.05490517932983,1.96721934452011,2.52470927204373,2.2085575359138,1.17131623288992,1.93881057959519,4.77937595905104,5.12436950389506,5.94460714656548,2.83367491172426,3.50707029493574,3.95287777946523,3.85585579706168,9.36804562374573,4.09550888434687,4.0721739838394,9.40329700943452,7.96470830039777,4.85561272309963,6.04647113929502,5.09233715340925,4.72483028609236,5.84126781093462,4.65170927702798,5.08947221268508,5.70395805415554,5.37262488490887,2.10837217149998,5.15677716240934,8.85142974959849,2.88097750450096,3.36332577835162,3.21505552547388,5.49754724291048,4.99432689285798,4.60737257685939,3.04464949114599,11.7335854031855,10.3797714723272,4.85162475720916,14.5099902588502,13.8859406958479,10.3738230876428,10.2660215842697,14.7726809770555,9.03590593552537,1.29797711407357,6.83483523191411,8.46186158649212,7.9633646768976,4.89757988212197,4.51090951479383,3.66045077130436,2.88963330989554,3.21888340344413,3.86959926652387,0,3.79603192297362,7.31950081656655,6.69633113095168,6.89991376847747,7.20596460362386,8.09186078308924,7.19085064810423,7.0674104335688,6.09190374471426,10.5627683224777,0.56369293868419,9.27002585472668,4.96375471371293,7.00024278038572,5.8121920564979,8.27885014904813,6.33729088687071,4.6873578543822,5.34782656571125,2.41584120826006,1.15212002503146,5.05617793005085,4.05450430580328,4.31386020092274,3.11809975146708,2.68540043501222,4.76835251475036,3.24527713703916,2.95379054349154,3.12995994839258,2.81965184623499,3.83139503519994,4.97035191772737,2.98256709085021,4.09069157635491,7.70883304291719,9.32341004171072,7.26682238536753,7.72269235274761,4.82973985080476,7.50729901804728,13.7363718200449,12.862102744744,10.5330141847426,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,2.05524755931193,0.755393897389701,0,2.2516060161211,0.453142408984205,1.55328093525546,1.55681021376265,5.1873233542134,1.53660245178721,9.96737539980005,4.61148957781561,6.06683577885047,7.77863547305653,4.94484137373346,9.62757628775446,8.08631077644152,6.08350319736575,8.67681170375951,7.21039607518095,7.74704344098918,6.89225627467359,5.23923060411381,6.14186927507734,6.94473193669338,6.1812885120496,6.32955356577908,5.48590803816665,8.69631450180754,7.39152188836695,8.72078499793971,8.65806299821042,7.36147088657586,7.50004688778368,6.83981249738391,7.06181391998481,5.61142271657738,6.4062909787054,7.68334962529395,5.32000356120596,6.8172210121825,7.9091710502268,5.49583271463481,7.95367468714389,6.01638951335235,5.35607329792761,5.07360263974886,6.26043156175138
|phase1_expression=2.40223270657191,8.37540978334467,8.64498554840118,10.8887116070459,8.5152274090879,3.86122325397347,4.67225281191051,2.58246646883153,0.140788722151667,1.40438715793196,1.19852577757853,0.478632953972018,2.05440875917447,1.66098764596095,2.33176833270964,1.82227740650843,0.699561878128147,1.26184866143295,2.4680598049033,2.12194825899015,5.78294373027274,4.17021995043718,3.13439746966722,3.67982572424835,4.35877634027623,1.72269589234506,6.46142994238612,6.03319451520489,5.32065574477847,4.78857246543868,2.43903561720835,1.90509202037889,1.23012957516914,0,1.1554064790051,2.1610503896604,2.24586291888606,13.393012183581,6.2506827561904,10.9939986234498,22.9410280332096,15.7100461540443,12.62326917881,3.27331726736501,1.82478476195126,2.9367480345869,6.25913075478431,1.96222640742402,2.19686182734472,3.69416808241138,2.79972843250725,1.43752564364972,0.838913030288682,1.45072428402269,1.68046899571232,2.57259436035947,6.01720223871389,3.09403255366465,0.809265843438391,0,1.90149421051854,1.35537812827653,5.33576877666684,4.94944844504769,7.9109309005358,7.8152812644071,5.39280198933128,3.45796474789399,0.829516898467821,0.405017814995072,0.630974884054146,1.14260393761521,3.3130281142742,0.61245399607477,0.766763768145891,0,1.10115880999389,1.65993539510744,0.921639199537461,0.923204014111357,1.37231465403614,1.04182674111352,1.95428099300967,1.12552522006336,3.36156145108982,2.35702868378934,2.27794689278565,0.931997229126503,2.19605960666234,4.91215140694106,19.7107852317141,2.58127163094416,2.03991400112325,7.55584468292944,11.0461990966104,9.40856462904405,5.33688796500657,2.38602451609281,2.33807404142582,2.47337702157238,1.40843419776681,3.84979432242953,10.1922095882658,7.11066703153331,3.46385665617943,4.05375784760158,2.52762222507392,4.79572294820052,9.06282592765101,8.46120192669501,6.41895709034703,6.69824052286711,4.38169444786511,6.0289056221049,7.2904998424137,7.79132866243988,7.16865406429684,15.1829324765907,7.07688441559899,6.14714029800155,7.95029466457417,4.84875253135222,11.1835056730873,3.80615036115011,1.67557365450764,6.13096932500619,1.43778149407104,1.79970819298022,3.17675567682662,1.49790639404823,4.11750542536764,0.879580464790051,2.78118912307642,2.30143911597297,2.90903262383384,4.05603157669394,3.56437773476107,8.70848794270651,9.60346482047964,20.6233018768745,2.08192708740326,1.60931473103431,2.52086981727489,3.76762044589288,4.150226448231,7.43059577652129,6.93392761741993,12.4177617954728,3.66465587985832,3.78212160335639,4.57472922826267,4.3839146485515,6.39508673218875,7.66154766348766,10.0833246839892,6.96619933864726,2.1066395619397,2.83082697826187,2.27330799516474,3.31401236056803,4.45599513964083,3.96136535214233,4.49814997611899,5.3126342571799,5.707883176833,3.72054311600653,5.633741429392,5.3712057488898,5.43047504714485,7.55170334763838,8.18794976413143,7.16379938384128,7.24515380460467,6.1734952629771,5.67782861123144,0.411618449517138,15.1992640172547,14.0158800331678,2.55945900642281,3.94802342162745,4.63922860759536,5.24377164020691,4.66993892074228,5.1360919050391,9.01605216934572,7.24675400785648,5.52937459360593,5.17286827306992,5.8489226135736,4.49409704327111,5.83572734661674,5.17767310461355,2.65535061334314,3.31320686568214,3.38123207019241,5.7022371796688,4.26695471768777,4.06787755363848,6.19718063817721,5.75679577120448,4.55296310739987,2.83813477020141,7.41131567717872,3.33690211432188,2.75182593158484,2.9232074610031,3.85434230638156,3.37648023653384,4.83789118384698,7.76779571117189,3.89124544260085,5.21666685057355,7.18841032636773,3.72140947668503,5.61667811606209,6.81962970457202,3.22915344339442,2.41221760681684,17.9210594461607,3.60033682363921,5.21487924614483,8.99648954608497,11.2651319178481,19.9332446355761,18.8054476299951,17.3668946593441,12.7684466726015,12.6234873099802,16.9022054776936,23.2685906896348,12.4333186943445,14.7542039753142,3.01582567878545,5.98296252200581,28.5223278351041,28.1455481230827,1.28440471990234,1.05490517932983,1.96721934452011,2.52470927204373,2.2085575359138,1.17131623288992,1.93881057959519,4.77937595905104,5.12436950389506,5.94460714656548,2.83367491172426,3.50707029493574,3.95287777946523,3.85585579706168,9.36804562374573,4.09550888434687,4.0721739838394,9.40329700943452,7.96470830039777,4.85561272309963,6.04647113929502,5.09233715340925,4.72483028609236,5.84126781093462,4.65170927702798,5.08947221268508,5.70395805415554,5.37262488490887,2.10837217149998,5.15677716240934,8.85142974959849,2.88097750450096,3.36332577835162,3.21505552547388,5.49754724291048,4.99432689285798,4.60737257685939,3.04464949114599,11.7335854031855,10.3797714723272,4.85162475720916,14.5099902588502,13.8859406958479,10.3738230876428,10.2660215842697,14.7726809770555,9.03590593552537,1.29797711407357,6.83483523191411,8.46186158649212,7.9633646768976,4.89757988212197,4.51090951479383,3.66045077130436,2.88963330989554,3.21888340344413,3.86959926652387,0,3.79603192297362,7.31950081656655,6.69633113095168,6.89991376847747,7.20596460362386,8.09186078308924,7.19085064810423,7.0674104335688,6.09190374471426,10.5627683224777,0.56369293868419,9.27002585472668,4.96375471371293,7.00024278038572,5.8121920564979,8.27885014904813,6.33729088687071,4.6873578543822,5.34782656571125,2.41584120826006,1.15212002503146,5.05617793005085,4.05450430580328,4.31386020092274,3.11809975146708,2.68540043501222,4.76835251475036,3.24527713703916,2.95379054349154,3.12995994839258,2.81965184623499,3.83139503519994,4.97035191772737,2.98256709085021,4.09069157635491,7.70883304291719,9.32341004171072,7.26682238536753,7.72269235274761,4.82973985080476,7.50729901804728,13.7363718200449,12.862102744744,10.5330141847426,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,2.05524755931193,0.755393897389701,0,2.2516060161211,0.453142408984205,1.55328093525546,1.55681021376265,5.1873233542134,1.53660245178721,9.96737539980005,4.61148957781561,6.06683577885047,7.77863547305653,4.94484137373346,9.62757628775446,8.08631077644152,6.08350319736575,8.67681170375951,7.21039607518095,7.74704344098918,6.89225627467359,5.23923060411381,6.14186927507734,6.94473193669338,6.1812885120496,6.32955356577908,5.48590803816665,8.69631450180754,7.39152188836695,8.72078499793971,8.65806299821042,7.36147088657586,7.50004688778368,6.83981249738391,7.06181391998481,5.61142271657738,6.4062909787054,7.68334962529395,5.32000356120596,6.8172210121825,7.9091710502268,5.49583271463481,7.95367468714389,6.01638951335235,5.35607329792761,5.07360263974886,6.26043156175138
|short_description=p2@Rreb1
|short_description=p2@Rreb1
}}
}}

Latest revision as of 13:48, 1 October 2015

Short description:p2@Rreb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rreb1_5end
Coexpression cluster:NA
Association with transcript: -205bp_to_NM_001177868, NR_033615, uc007qcx.2, uc007qcy.2_5end
EntrezGene:Rreb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rreb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F94.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D78.46
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C17.29
adrenal gland, neonate N25.CNhs11223.1377-27I37.79
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H115.18
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F56.15
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.71
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G420.62
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G86.93
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I67.16
heart, neonate N25.CNhs11196.1351-25D37.25
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I315.20
intestine, adult.CNhs10496.178-9A314.02
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G74.07
kidney, neonate N10.CNhs11206.758-6D56.20
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G47.77
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B117.92
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C59.00
lung, embryo E16.CNhs10998.458-17B611.27
lung, embryo E17.CNhs10605.480-44A619.93
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C617.37
lung, neonate N06.CNhs11212.683-20E512.77
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E616.90
lung, neonate N20.CNhs11109.822-18A423.27
lung, neonate N25.CNhs11119.1359-25C712.43
lung, neonate N30.CNhs11133.1394-42H214.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B628.52
mammary gland, adult pregnant day19.CNhs10476.588-5H228.15
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G69.40
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G413.89
skin, neonate N03.CNhs11215.662-22H310.37
skin, neonate N06.CNhs11097.693-20I510.27
skin, neonate N10.CNhs11108.762-6C414.77
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D46.70
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B76.34
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E513.74
vagina, adult.CNhs10502.89-27D512.86
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial bud2.31e-0817
lung2.13e-0714
respiratory tube2.13e-0714
respiration organ2.13e-0714
pair of lungs2.13e-0714
lung primordium2.13e-0714
lung bud2.13e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:37918486..37918575,%2B&oldid=4305859"