FFCP PHASE1:Hg19::chr11:2320600..2320611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2320600..2320611,+ | |||
|coexpression_cluster_id=C1336 | |||
|description=CAGE_peak_at_chr11:2320600..2320611,+ | |description=CAGE_peak_at_chr11:2320600..2320611,+ | ||
|id=chr11:2320600..2320611,+ | |id=chr11:2320600..2320611,+ | ||
|ontology_enrichment_celltype=CL:0000625!9.78e-51!11;CL:0000791!1.04e-38!18;CL:0000789!1.04e-38!18;CL:0002420!1.04e-38!18;CL:0002419!1.04e-38!18;CL:0000790!1.04e-38!18;CL:0000084!1.55e-27!25;CL:0000827!1.55e-27!25;CL:0000842!4.64e-27!3;CL:0000838!2.20e-22!52;CL:0000542!6.34e-22!53;CL:0000051!6.34e-22!53;CL:0000224!1.83e-20!4;CL:0002087!5.31e-16!119;CL:0000080!7.64e-14!6;CL:0000738!3.30e-13!140;CL:0000037!3.00e-10!172;CL:0000566!3.00e-10!172;CL:0002031!1.18e-09!124;CL:0000988!1.55e-09!182 | |ontology_enrichment_celltype=CL:0000625!9.78e-51!11;CL:0000791!1.04e-38!18;CL:0000789!1.04e-38!18;CL:0002420!1.04e-38!18;CL:0002419!1.04e-38!18;CL:0000790!1.04e-38!18;CL:0000084!1.55e-27!25;CL:0000827!1.55e-27!25;CL:0000842!4.64e-27!3;CL:0000838!2.20e-22!52;CL:0000542!6.34e-22!53;CL:0000051!6.34e-22!53;CL:0000224!1.83e-20!4;CL:0002087!5.31e-16!119;CL:0000080!7.64e-14!6;CL:0000738!3.30e-13!140;CL:0000037!3.00e-10!172;CL:0000566!3.00e-10!172;CL:0002031!1.18e-09!124;CL:0000988!1.55e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.93e-89;11!CL:0000791;4.53e-55;18!CL:0000789;4.53e-55;18!CL:0002419;4.53e-55;18!CL:0000084;6.36e-40;25!CL:0000542;2.32e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.93e-89,11;CL:0000791,4.53e-55,18;CL:0000789,4.53e-55,18;CL:0002420,4.53e-55,18;CL:0002419,4.53e-55,18;CL:0000790,4.53e-55,18;CL:0000084,6.36e-40,25;CL:0000827,6.36e-40,25;CL:0000838,1.25e-19,52;CL:0000542,2.83e-19,53;CL:0000051,2.83e-19,53;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.53e-55;18!CL:0000051;2.32e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.88e-14!15;UBERON:0000179!1.88e-14!15;UBERON:0000463!1.88e-14!15;UBERON:0002171!5.30e-10!1;UBERON:0006518!5.30e-10!1;UBERON:0008949!5.30e-10!1;UBERON:0000101!5.30e-10!1;UBERON:0002167!5.30e-10!1;UBERON:0002372!1.17e-09!1;UBERON:0001961!1.17e-09!1;UBERON:0001744!1.17e-09!1;UBERON:0001735!1.17e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr11:2320600..2320611,+ | |short_description=p@chr11:2320600..2320611,+ | ||
}} | }} |
Latest revision as of 21:09, 23 July 2015
Short description: | p@chr11:2320600..2320611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2320600..2320611, + |
Coexpression cluster: | C1336_CD8_Natural_Pericytes_Peripheral_medulla_thyroid_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.93e-89 | 11 |
mature alpha-beta T cell | 4.53e-55 | 18 |
alpha-beta T cell | 4.53e-55 | 18 |
immature T cell | 4.53e-55 | 18 |
mature T cell | 4.53e-55 | 18 |
immature alpha-beta T cell | 4.53e-55 | 18 |
T cell | 6.36e-40 | 25 |
pro-T cell | 6.36e-40 | 25 |
lymphoid lineage restricted progenitor cell | 1.25e-19 | 52 |
lymphocyte | 2.83e-19 | 53 |
common lymphoid progenitor | 2.83e-19 | 53 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |