FFCP PHASE1:Hg19::chr11:35019646..35019663,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35019646..35019663,+ | |||
|description=CAGE_peak_at_chr11:35019646..35019663,+ | |description=CAGE_peak_at_chr11:35019646..35019663,+ | ||
|id=chr11:35019646..35019663,+ | |id=chr11:35019646..35019663,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.06e-35!42;CL:0000860!1.10e-32!45;CL:0000766!6.69e-29!76;CL:0000557!5.14e-28!71;CL:0002009!8.25e-28!65;CL:0002194!6.11e-27!63;CL:0000576!6.11e-27!63;CL:0000040!6.11e-27!63;CL:0000559!6.11e-27!63;CL:0000839!1.32e-26!70;CL:0000763!4.90e-21!112;CL:0000049!4.90e-21!112;CL:0002031!2.89e-17!124;CL:0000738!5.49e-17!140;CL:0002032!2.87e-15!165;CL:0000837!2.87e-15!165;CL:0002087!3.75e-15!119;CL:0000037!4.05e-14!172;CL:0000566!4.05e-14!172;CL:0000988!1.22e-12!182;CL:0000767!6.35e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.06e-35!42;CL:0000860!1.10e-32!45;CL:0000766!6.69e-29!76;CL:0000557!5.14e-28!71;CL:0002009!8.25e-28!65;CL:0002194!6.11e-27!63;CL:0000576!6.11e-27!63;CL:0000040!6.11e-27!63;CL:0000559!6.11e-27!63;CL:0000839!1.32e-26!70;CL:0000763!4.90e-21!112;CL:0000049!4.90e-21!112;CL:0002031!2.89e-17!124;CL:0000738!5.49e-17!140;CL:0002032!2.87e-15!165;CL:0000837!2.87e-15!165;CL:0002087!3.75e-15!119;CL:0000037!4.05e-14!172;CL:0000566!4.05e-14!172;CL:0000988!1.22e-12!182;CL:0000767!6.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-39;33!CL:0002057;1.43e-39;33!CL:0000473;6.33e-29;39!CL:0000234;6.33e-29;39!CL:0000576;5.58e-17;48!CL:0000766;5.44e-12;69!CL:0002087;1.63e-07;104!CL:0000763;4.08e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.66e-34,42;CL:0002057,2.66e-34,42;CL:0000473,8.23e-30,48;CL:0000234,8.23e-30,48;CL:0002009,9.46e-27,61;CL:0000557,3.15e-24,67;CL:0002194,1.62e-23,59;CL:0000576,1.62e-23,59;CL:0000040,1.62e-23,59;CL:0000559,1.62e-23,59;CL:0000839,6.97e-21,66;CL:0000766,5.01e-19,72;CL:0000763,6.82e-17,108;CL:0000049,6.82e-17,108;CL:0002031,8.76e-13,120;CL:0002087,2.54e-11,115;CL:0000738,4.62e-11,136;CL:0002032,1.11e-10,161;CL:0000837,1.11e-10,161;CL:0000037,3.79e-10,168;CL:0000988,1.59e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.90e-27;42 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.18e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.83e-25!80;UBERON:0001474!9.57e-23!86;UBERON:0004765!6.79e-19!101;UBERON:0001434!6.79e-19!101;UBERON:0002390!1.73e-17!102;UBERON:0003061!1.73e-17!102;UBERON:0002193!5.54e-16!112;UBERON:0002405!2.74e-15!115;UBERON:0002204!2.81e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-21,76;UBERON:0001474,1.63e-19,82;UBERON:0004765,1.24e-17,90;UBERON:0002405,5.21e-17,93;UBERON:0002390,4.70e-16,98;UBERON:0003061,4.70e-16,98;UBERON:0001434,1.07e-15,100;UBERON:0002193,2.10e-14,108;UBERON:0002204,1.18e-08,167;UBERON:0003081,9.04e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.485168122375632,0.929716147622738,0.822335776043652,3.09706370895104,0.28769239232215,0.256160706529101,1.41889337933151,2.06847408441971,1.93645405075148,5.41705946377367,0.941211697713023,0.272906150057846,1.57306439111559,0,0.962787081228281,0,0,0.398927315243264,0.426224750532694,2.03146467040009,1.70215567407342,2.4912889959823,0.75374599577023,0.521482918420201,0.868755378820466,2.42159801053347,3.31449872388808,3.48108626184973,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,2.54008299268659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,1.23337732182076,0.19871461170299,0,0,0,0.426905989478705,0,2.16135625731159,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,2.0247650239635,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0,0,0,0,0,0.941063278792687,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.680117776536817,0,0,0.179088841081487,1.54400723580486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,5.12055284925532,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.485168122375632,0.929716147622738,0.822335776043652,3.09706370895104,0.28769239232215,0.256160706529101,1.41889337933151,2.06847408441971,1.93645405075148,5.41705946377367,0.941211697713023,0.272906150057846,1.57306439111559,0,0.962787081228281,0,0,0.398927315243264,0.426224750532694,2.03146467040009,1.70215567407342,2.4912889959823,0.75374599577023,0.521482918420201,0.868755378820466,2.42159801053347,3.31449872388808,3.48108626184973,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,2.54008299268659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,1.23337732182076,0.19871461170299,0,0,0,0.426905989478705,0,2.16135625731159,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,2.0247650239635,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0,0,0,0,0,0.941063278792687,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.680117776536817,0,0,0.179088841081487,1.54400723580486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,5.12055284925532,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr11:35019646..35019663,+ | |short_description=p@chr11:35019646..35019663,+ | ||
}} | }} |
Latest revision as of 21:46, 23 July 2015
Short description: | p@chr11:35019646..35019663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35019646..35019663, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.66e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-34 | 42 |
defensive cell | 8.23e-30 | 48 |
phagocyte | 8.23e-30 | 48 |
macrophage dendritic cell progenitor | 9.46e-27 | 61 |
granulocyte monocyte progenitor cell | 3.15e-24 | 67 |
monopoietic cell | 1.62e-23 | 59 |
monocyte | 1.62e-23 | 59 |
monoblast | 1.62e-23 | 59 |
promonocyte | 1.62e-23 | 59 |
myeloid lineage restricted progenitor cell | 6.97e-21 | 66 |
myeloid leukocyte | 5.01e-19 | 72 |
myeloid cell | 6.82e-17 | 108 |
common myeloid progenitor | 6.82e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 8.76e-13 | 120 |
nongranular leukocyte | 2.54e-11 | 115 |
leukocyte | 4.62e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.11e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.11e-10 | 161 |
hematopoietic stem cell | 3.79e-10 | 168 |
hematopoietic cell | 1.59e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.51e-21 | 76 |
bone element | 1.63e-19 | 82 |
skeletal element | 1.24e-17 | 90 |
immune system | 5.21e-17 | 93 |
hematopoietic system | 4.70e-16 | 98 |
blood island | 4.70e-16 | 98 |
skeletal system | 1.07e-15 | 100 |
hemolymphoid system | 2.10e-14 | 108 |
musculoskeletal system | 1.18e-08 | 167 |
lateral plate mesoderm | 9.04e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.44e-07 | 2 |