FFCP PHASE1:Mm9::chr18:60756420..60756422,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:60756420..60756422,- | |||
|description=CAGE_peak_at_chr18:60756420..60756422,- | |description=CAGE_peak_at_chr18:60756420..60756422,- | ||
|id=chr18:60756420..60756422,- | |id=chr18:60756420..60756422,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,2.66e-39,3;CL:0000192,5.71e-11,3;CL:0000359,5.71e-11,3;CL:0002539,5.71e-11,3;CL:0000514,5.71e-11,3;CL:0002076,7.70e-09,15;CL:0000223,6.79e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.71e-11,3;UBERON:0004237,5.71e-11,3;UBERON:0004695,5.71e-11,3;UBERON:0002111,5.71e-11,3;UBERON:0004178,5.71e-11,3;UBERON:0000947,1.46e-08,4;UBERON:0001637,1.46e-08,4;UBERON:0004573,1.46e-08,4;UBERON:0003509,1.46e-08,4;UBERON:0004571,1.46e-08,4;UBERON:0010191,1.46e-08,4;UBERON:0004572,1.46e-08,4;UBERON:0000055,4.17e-07,5;UBERON:0007500,4.17e-07,5;UBERON:0001981,4.17e-07,5;UBERON:0002049,4.17e-07,5;UBERON:0007798,4.17e-07,5;UBERON:0004537,4.17e-07,5;UBERON:0006965,4.17e-07,5 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0,0,0,0,0,0.159544317990673,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.405507724878058,3.12029478674859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0.91347103775248,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.180938774784468,0,0,0.291480836629851,0,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0,0,0,0,0,0.159544317990673,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.405507724878058,3.12029478674859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0.91347103775248,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.180938774784468,0,0,0.291480836629851,0,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr18:60756420..60756422,- | |short_description=p@chr18:60756420..60756422,- | ||
}} | }} |
Latest revision as of 22:43, 5 August 2015
Short description: | p@chr18:60756420..60756422, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:60756420..60756422, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 2.66e-39 | 3 |
smooth muscle cell | 5.71e-11 | 3 |
vascular associated smooth muscle cell | 5.71e-11 | 3 |
aortic smooth muscle cell | 5.71e-11 | 3 |
smooth muscle myoblast | 5.71e-11 | 3 |
endo-epithelial cell | 7.70e-09 | 15 |
endodermal cell | 6.79e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.71e-11 | 3 |
blood vessel smooth muscle | 5.71e-11 | 3 |
arterial system smooth muscle | 5.71e-11 | 3 |
artery smooth muscle tissue | 5.71e-11 | 3 |
aorta smooth muscle tissue | 5.71e-11 | 3 |
aorta | 1.46e-08 | 4 |
artery | 1.46e-08 | 4 |
systemic artery | 1.46e-08 | 4 |
arterial blood vessel | 1.46e-08 | 4 |
systemic arterial system | 1.46e-08 | 4 |
aortic system | 1.46e-08 | 4 |
arterial system | 1.46e-08 | 4 |
vessel | 4.17e-07 | 5 |
epithelial tube open at both ends | 4.17e-07 | 5 |
blood vessel | 4.17e-07 | 5 |
vasculature | 4.17e-07 | 5 |
vascular system | 4.17e-07 | 5 |
blood vasculature | 4.17e-07 | 5 |
vascular cord | 4.17e-07 | 5 |