FFCP PHASE1:Mm9::chr19:4201591..4201623,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19367 | |EntrezGene=19367 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0F6 | |UniProt=Q9Z0F6 | ||
|association_with_transcript=0bp_to_ENSMUST00000025740,NM_011237,uc008fzh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000025740,NM_011237,uc008fzh.1_5end | ||
|cluster_id=chr19:4201591..4201623,- | |||
|description=CAGE_peak_1_at_Rad9_5end | |description=CAGE_peak_1_at_Rad9_5end | ||
|id=chr19:4201591..4201623,- | |id=chr19:4201591..4201623,- | ||
|ontology_enrichment_celltype=CL:0000988!6.92e-08!32;CL:0002032!6.92e-08!32;CL:0000037!6.92e-08!32;CL:0000566!6.92e-08!32;CL:0000837!6.92e-08!32;CL:0000219!9.01e-08!54;CL:0002031!1.50e-07!25;CL:0000763!1.82e-07!16;CL:0000839!3.73e-07!13;CL:0002320!5.94e-07!46;CL:0000134!5.94e-07!46;CL:0000049!8.00e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.92e-08,32;CL:0002032,6.92e-08,32;CL:0000037,6.92e-08,32;CL:0000837,6.92e-08,32;CL:0000219,9.01e-08,54;CL:0002031,1.50e-07,25;CL:0000763,1.82e-07,16;CL:0000839,3.73e-07,13;CL:0002320,5.94e-07,46;CL:0000134,5.94e-07,46;CL:0000049,8.00e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-12!45;UBERON:0003061!2.78e-12!45;UBERON:0002193!2.18e-11!48;UBERON:0003081!1.65e-09!88;UBERON:0002204!2.43e-08!32;UBERON:0002371!1.45e-07!16;UBERON:0001474!2.29e-07!22;UBERON:0004765!2.29e-07!22;UBERON:0001434!2.29e-07!22;UBERON:0002405!5.86e-07!70;UBERON:0002384!5.94e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-12,45;UBERON:0003061,2.75e-12,45;UBERON:0002193,2.16e-11,48;UBERON:0002405,2.16e-11,48;UBERON:0003081,5.00e-09,87;UBERON:0002204,2.43e-08,32;UBERON:0002371,1.45e-07,16;UBERON:0001474,2.29e-07,22;UBERON:0004765,2.29e-07,22;UBERON:0001434,2.29e-07,22;UBERON:0002384,5.94e-07,46 | |||
|phase1_expression=8.64803774365887,0.697950815278722,2.27499619694768,3.93203474698879,3.50627010962443,3.18970616632591,3.97141489012394,47.1300130561753,3.51971805379167,4.91535505276186,10.4442960617558,8.93448180747768,40.5745729936958,48.8680049522195,17.6548173762301,15.9955461237963,25.8837894907414,38.486384173705,33.1816929325888,35.6487307510345,7.22867966284093,19.5603173865744,16.194386926614,6.23970448894286,5.27641346454491,1.14846392823004,3.87685796543167,3.44753972297422,5.13063232532209,5.29263272495855,5.54326276638262,24.7661962649256,23.3724619282137,31.6963362030877,6.64358725427932,13.1325369833209,11.2293145944303,38.0863783970586,24.2213956802378,37.6937095661135,42.352667138233,45.7640474922159,45.6379731849284,18.0032449705076,17.335455238537,14.3166466686112,25.8189143634853,11.7733584445441,11.8630538676615,7.97162586204562,11.3389001516544,10.062679505548,27.1807821813533,15.9579671242496,12.7715643674136,12.8629718017974,9.74213695791773,8.76642556871652,8.6996078169627,9.52183762689659,8.23980824558033,15.5868484751801,12.450127145556,30.5965903875676,31.6437236021432,24.8668040231135,13.4820049733282,15.3687322128622,6.73982480005105,5.67024940993101,5.46844899513593,1.99955689082663,5.74258206474195,6.36952155917761,8.33855597858656,6.43453150627015,6.60695285996332,4.72443150915195,5.06901559745603,5.14356522147756,9.97215315266265,8.33461392890816,9.49222196604695,7.31591393041184,5.50073691996516,7.36571463684169,5.83723891276322,5.40558392893372,19.9159888466274,28.4149066001514,8.11620568364698,6.0229671388697,2.03991400112325,3.77792234146472,5.19821133958135,1.34408066129201,8.28622078777336,36.6425193542824,20.5230943636266,26.8538076627859,8.87313544593087,8.98285341900225,0,0,9.09262372247099,7.60079596425296,9.60496445528088,5.48082622651488,50.4928873111985,10.3909497345377,8.32729568477452,7.00270600117925,8.07154240396205,7.38540938707851,4.70354828542819,5.02666365318702,6.92145909656247,12.2909453381925,34.4998115260451,9.54424414689714,15.9005893291483,18.9101348722737,9.31958806090611,9.36898550436951,7.74952815209784,9.45191104271788,13.0598485711453,7.7987355029143,12.3258120260873,11.833460512981,14.1825186873774,6.53402630986895,8.16974304903699,4.60287823194595,11.4283424507758,6.65189178577806,10.2857757488819,14.5556155613809,9.09801930361229,9.89076722666428,16.0048144844126,15.6333431014762,12.6043490863744,9.64510834148576,10.4095843701532,11.914575986491,8.52685693493532,11.6416516832557,20.47895932862,14.7502742530899,15.4836989264275,11.836569551089,13.0682207136031,14.626590993931,12.3469281844766,10.1507476077432,18.2575428701441,11.8380037272769,13.6398479709884,12.0132948070591,12.4298811789981,9.7233513188948,9.46978942340841,11.4123254413494,10.181629450567,12.556833016522,10.1943892531855,3.85325629811659,10.3672705445493,6.7308660272429,4.70199095365963,5.70179950958796,5.92785311285837,4.16039898157152,7.36014819974445,8.12946437796347,5.94753809370836,9.52022039988759,15.1434657880016,12.0763069367428,14.1754207454303,18.3532007407242,13.5650606745371,11.0330863145284,10.4396393539793,7.90554982675252,10.0534083520108,8.55512829776949,8.96834800747953,15.2799299471218,6.91641759599022,7.56736838366595,16.6907752838712,11.9960938240215,16.9061603509621,9.9789150644204,9.11576689687841,9.32806404541237,7.77809406628365,7.82333784291891,6.59394656933774,6.66344685177723,4.15033677922008,20.6887931087957,23.7836384086976,19.3381416650974,25.7632354163399,16.4000468631643,15.2775511068852,12.6586300478357,10.5387897403773,13.7280706594041,5.75072826109418,10.0478055870496,8.11297950097858,6.06189307073068,5.20252499213545,6.75420929908714,16.812540305161,11.5589761179996,17.2742875028547,11.712410918488,15.9589368836181,15.0755631697634,16.1869675802489,10.9274842800367,13.7142575372386,16.3883870340093,12.118562417969,14.9115616391322,13.4694285855399,13.7416605652436,25.6345182696763,31.5465296614852,17.7035138286853,15.7283945393698,9.31193421929193,8.67366480782304,19.8361283905777,5.04941854408746,14.5133780931478,12.8844785617891,13.3562506594335,19.5954414321093,12.9223230967789,10.190755108398,15.7876173653209,10.5212108848072,12.2539211163422,6.42642632843614,10.0777460497871,16.9162323483892,10.9134262766896,15.1772513134733,3.98235415019888,10.4395673546642,10.5813244937663,5.09233715340925,12.4026795009925,6.14870295887855,7.23599220871019,11.6330793432802,8.91243445961803,7.9009189483954,5.27093042874994,5.15677716240934,9.87274856685985,10.8036656418786,17.0753462593236,10.0738406464848,8.86701168211368,7.31312152168489,9.05019613311665,7.91608867697958,17.3657063967146,5.71946591332314,7.27743713581374,9.56340267060584,11.3025098687134,12.2435237604156,11.4597450243011,9.52017218521355,7.57850175237612,8.90041449650446,28.3645662124435,15.2726282292785,17.2230910453832,32.7761115188162,36.9074414846768,30.198718863261,7.13909405974192,9.37674730568509,8.43019840206985,7.63736494412091,20.8781755763549,14.4356821660063,8.6404272657441,10.4544148007234,12.2283035697859,9.03591120778299,6.86023682520288,4.97336289769656,7.38805347763219,12.4267862617385,5.07323644815771,9.12050930868271,11.7475528224539,11.8615224889869,11.3660644660403,11.3200604078821,9.27122185301456,8.33308063001281,7.13043542094834,5.55643477899814,5.76060012515731,48.6657125767395,13.1771389938607,16.5364641035372,17.2794694560467,25.0637373934474,22.2523117355017,17.6687310794354,24.5164615109798,22.7174512383332,23.31928283643,26.3156343207154,31.5763533596798,28.4787051255375,29.8036100563001,7.48210265930198,17.9808622232992,13.4570784914214,11.9198077618496,9.85266929564171,10.1348536743638,8.42497471629419,9.21784030039983,6.52043735245972,5.0827665835536,3.22227665555024,6.30185064783336,3.09335728218638,2.05524755931193,4.5323633843382,7.42524750254986,4.05289082901798,4.98456649882625,3.62432218226274,13.8037172286955,16.7590446828433,15.0245573063638,12.6415492875513,14.0440818960748,8.82448840560068,10.0011027510727,9.88968274746692,10.5903339165299,9.09709962349671,10.8996098952803,9.24269072791773,7.58496210506047,8.45132011744274,9.24711050185374,6.19181798667996,8.11190281613988,6.75182271622968,5.35711671044299,7.50714492685426,7.20025430009372,9.40621772644489,9.29901140794552,9.1568242478367,6.02300034658116,8.46146078916765,7.13419094203813,8.41823076601097,7.60503037536826,10.1005608898393,8.06718123244384,6.89531376628944,5.32000356120596,8.2116525828562,13.3105561576988,14.4890135204009,12.6323068560521,11.6030369186081,8.22539827896026,11.9119366324538,11.5933917810211 | |phase1_expression=8.64803774365887,0.697950815278722,2.27499619694768,3.93203474698879,3.50627010962443,3.18970616632591,3.97141489012394,47.1300130561753,3.51971805379167,4.91535505276186,10.4442960617558,8.93448180747768,40.5745729936958,48.8680049522195,17.6548173762301,15.9955461237963,25.8837894907414,38.486384173705,33.1816929325888,35.6487307510345,7.22867966284093,19.5603173865744,16.194386926614,6.23970448894286,5.27641346454491,1.14846392823004,3.87685796543167,3.44753972297422,5.13063232532209,5.29263272495855,5.54326276638262,24.7661962649256,23.3724619282137,31.6963362030877,6.64358725427932,13.1325369833209,11.2293145944303,38.0863783970586,24.2213956802378,37.6937095661135,42.352667138233,45.7640474922159,45.6379731849284,18.0032449705076,17.335455238537,14.3166466686112,25.8189143634853,11.7733584445441,11.8630538676615,7.97162586204562,11.3389001516544,10.062679505548,27.1807821813533,15.9579671242496,12.7715643674136,12.8629718017974,9.74213695791773,8.76642556871652,8.6996078169627,9.52183762689659,8.23980824558033,15.5868484751801,12.450127145556,30.5965903875676,31.6437236021432,24.8668040231135,13.4820049733282,15.3687322128622,6.73982480005105,5.67024940993101,5.46844899513593,1.99955689082663,5.74258206474195,6.36952155917761,8.33855597858656,6.43453150627015,6.60695285996332,4.72443150915195,5.06901559745603,5.14356522147756,9.97215315266265,8.33461392890816,9.49222196604695,7.31591393041184,5.50073691996516,7.36571463684169,5.83723891276322,5.40558392893372,19.9159888466274,28.4149066001514,8.11620568364698,6.0229671388697,2.03991400112325,3.77792234146472,5.19821133958135,1.34408066129201,8.28622078777336,36.6425193542824,20.5230943636266,26.8538076627859,8.87313544593087,8.98285341900225,0,0,9.09262372247099,7.60079596425296,9.60496445528088,5.48082622651488,50.4928873111985,10.3909497345377,8.32729568477452,7.00270600117925,8.07154240396205,7.38540938707851,4.70354828542819,5.02666365318702,6.92145909656247,12.2909453381925,34.4998115260451,9.54424414689714,15.9005893291483,18.9101348722737,9.31958806090611,9.36898550436951,7.74952815209784,9.45191104271788,13.0598485711453,7.7987355029143,12.3258120260873,11.833460512981,14.1825186873774,6.53402630986895,8.16974304903699,4.60287823194595,11.4283424507758,6.65189178577806,10.2857757488819,14.5556155613809,9.09801930361229,9.89076722666428,16.0048144844126,15.6333431014762,12.6043490863744,9.64510834148576,10.4095843701532,11.914575986491,8.52685693493532,11.6416516832557,20.47895932862,14.7502742530899,15.4836989264275,11.836569551089,13.0682207136031,14.626590993931,12.3469281844766,10.1507476077432,18.2575428701441,11.8380037272769,13.6398479709884,12.0132948070591,12.4298811789981,9.7233513188948,9.46978942340841,11.4123254413494,10.181629450567,12.556833016522,10.1943892531855,3.85325629811659,10.3672705445493,6.7308660272429,4.70199095365963,5.70179950958796,5.92785311285837,4.16039898157152,7.36014819974445,8.12946437796347,5.94753809370836,9.52022039988759,15.1434657880016,12.0763069367428,14.1754207454303,18.3532007407242,13.5650606745371,11.0330863145284,10.4396393539793,7.90554982675252,10.0534083520108,8.55512829776949,8.96834800747953,15.2799299471218,6.91641759599022,7.56736838366595,16.6907752838712,11.9960938240215,16.9061603509621,9.9789150644204,9.11576689687841,9.32806404541237,7.77809406628365,7.82333784291891,6.59394656933774,6.66344685177723,4.15033677922008,20.6887931087957,23.7836384086976,19.3381416650974,25.7632354163399,16.4000468631643,15.2775511068852,12.6586300478357,10.5387897403773,13.7280706594041,5.75072826109418,10.0478055870496,8.11297950097858,6.06189307073068,5.20252499213545,6.75420929908714,16.812540305161,11.5589761179996,17.2742875028547,11.712410918488,15.9589368836181,15.0755631697634,16.1869675802489,10.9274842800367,13.7142575372386,16.3883870340093,12.118562417969,14.9115616391322,13.4694285855399,13.7416605652436,25.6345182696763,31.5465296614852,17.7035138286853,15.7283945393698,9.31193421929193,8.67366480782304,19.8361283905777,5.04941854408746,14.5133780931478,12.8844785617891,13.3562506594335,19.5954414321093,12.9223230967789,10.190755108398,15.7876173653209,10.5212108848072,12.2539211163422,6.42642632843614,10.0777460497871,16.9162323483892,10.9134262766896,15.1772513134733,3.98235415019888,10.4395673546642,10.5813244937663,5.09233715340925,12.4026795009925,6.14870295887855,7.23599220871019,11.6330793432802,8.91243445961803,7.9009189483954,5.27093042874994,5.15677716240934,9.87274856685985,10.8036656418786,17.0753462593236,10.0738406464848,8.86701168211368,7.31312152168489,9.05019613311665,7.91608867697958,17.3657063967146,5.71946591332314,7.27743713581374,9.56340267060584,11.3025098687134,12.2435237604156,11.4597450243011,9.52017218521355,7.57850175237612,8.90041449650446,28.3645662124435,15.2726282292785,17.2230910453832,32.7761115188162,36.9074414846768,30.198718863261,7.13909405974192,9.37674730568509,8.43019840206985,7.63736494412091,20.8781755763549,14.4356821660063,8.6404272657441,10.4544148007234,12.2283035697859,9.03591120778299,6.86023682520288,4.97336289769656,7.38805347763219,12.4267862617385,5.07323644815771,9.12050930868271,11.7475528224539,11.8615224889869,11.3660644660403,11.3200604078821,9.27122185301456,8.33308063001281,7.13043542094834,5.55643477899814,5.76060012515731,48.6657125767395,13.1771389938607,16.5364641035372,17.2794694560467,25.0637373934474,22.2523117355017,17.6687310794354,24.5164615109798,22.7174512383332,23.31928283643,26.3156343207154,31.5763533596798,28.4787051255375,29.8036100563001,7.48210265930198,17.9808622232992,13.4570784914214,11.9198077618496,9.85266929564171,10.1348536743638,8.42497471629419,9.21784030039983,6.52043735245972,5.0827665835536,3.22227665555024,6.30185064783336,3.09335728218638,2.05524755931193,4.5323633843382,7.42524750254986,4.05289082901798,4.98456649882625,3.62432218226274,13.8037172286955,16.7590446828433,15.0245573063638,12.6415492875513,14.0440818960748,8.82448840560068,10.0011027510727,9.88968274746692,10.5903339165299,9.09709962349671,10.8996098952803,9.24269072791773,7.58496210506047,8.45132011744274,9.24711050185374,6.19181798667996,8.11190281613988,6.75182271622968,5.35711671044299,7.50714492685426,7.20025430009372,9.40621772644489,9.29901140794552,9.1568242478367,6.02300034658116,8.46146078916765,7.13419094203813,8.41823076601097,7.60503037536826,10.1005608898393,8.06718123244384,6.89531376628944,5.32000356120596,8.2116525828562,13.3105561576988,14.4890135204009,12.6323068560521,11.6030369186081,8.22539827896026,11.9119366324538,11.5933917810211 | ||
|short_description=p1@Rad9 | |short_description=p1@Rad9 | ||
}} | }} |
Latest revision as of 18:55, 25 September 2015
Short description: | p1@Rad9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rad9_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_ENSMUST00000025740, NM_011237, uc008fzh.1_5end |
EntrezGene: | Rad9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.92e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.92e-08 | 32 |
hematopoietic stem cell | 6.92e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.92e-08 | 32 |
motile cell | 9.01e-08 | 54 |
hematopoietic lineage restricted progenitor cell | 1.50e-07 | 25 |
myeloid cell | 1.82e-07 | 16 |
myeloid lineage restricted progenitor cell | 3.73e-07 | 13 |
connective tissue cell | 5.94e-07 | 46 |
mesenchymal cell | 5.94e-07 | 46 |
common myeloid progenitor | 8.00e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-12 | 45 |
blood island | 2.75e-12 | 45 |
hemolymphoid system | 2.16e-11 | 48 |
immune system | 2.16e-11 | 48 |
lateral plate mesoderm | 5.00e-09 | 87 |
musculoskeletal system | 2.43e-08 | 32 |
bone marrow | 1.45e-07 | 16 |
bone element | 2.29e-07 | 22 |
skeletal element | 2.29e-07 | 22 |
skeletal system | 2.29e-07 | 22 |
connective tissue | 5.94e-07 | 46 |