FFCP PHASE1:Mm9::chr15:26291955..26291956,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=733 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:26291955..26291956,+ | |||
|description=CAGE_peak_at_chr15:26291955..26291956,+ | |description=CAGE_peak_at_chr15:26291955..26291956,+ | ||
|id=chr15:26291955..26291956,+ | |id=chr15:26291955..26291956,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.25e-14!71;UBERON:0003075!1.25e-14!71;UBERON:0007284!1.25e-14!71;UBERON:0001049!2.73e-12!52;UBERON:0005068!2.73e-12!52;UBERON:0006241!2.73e-12!52;UBERON:0007135!2.73e-12!52;UBERON:0000033!4.07e-12!63;UBERON:0000955!1.88e-11!50;UBERON:0006238!1.88e-11!50;UBERON:0003056!4.29e-11!49;UBERON:0002616!9.74e-11!49;UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0002021!4.09e-10!10;UBERON:0000411!4.09e-10!10;UBERON:0001950!4.09e-10!10;UBERON:0000073!5.99e-10!75;UBERON:0001016!5.99e-10!75;UBERON:0001017!1.87e-09!73;UBERON:0005743!1.87e-09!73;UBERON:0002020!4.30e-09!34;UBERON:0003080!9.63e-09!40;UBERON:0002780!3.91e-08!39;UBERON:0001890!3.91e-08!39;UBERON:0006240!3.91e-08!39;UBERON:0002619!1.49e-07!17;UBERON:0002791!1.49e-07!29;UBERON:0003528!1.49e-07!29;UBERON:0001893!1.49e-07!29;UBERON:0000956!3.81e-07!21;UBERON:0001869!3.81e-07!21;UBERON:0000203!3.81e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.10e-33,10;UBERON:0000411,3.10e-33,10;UBERON:0001950,3.10e-33,10;UBERON:0002619,4.78e-19,17;UBERON:0000955,7.31e-18,47;UBERON:0006238,7.31e-18,47;UBERON:0001049,8.27e-16,52;UBERON:0005068,8.27e-16,52;UBERON:0006241,8.27e-16,52;UBERON:0007135,8.27e-16,52;UBERON:0002616,1.08e-15,46;UBERON:0000956,3.55e-15,21;UBERON:0001869,3.55e-15,21;UBERON:0000203,3.55e-15,21;UBERON:0000073,3.94e-15,54;UBERON:0001017,5.07e-14,73;UBERON:0001016,1.43e-13,75;UBERON:0002020,2.37e-13,34;UBERON:0003080,2.46e-13,40;UBERON:0003528,3.95e-13,29;UBERON:0002791,3.95e-13,29;UBERON:0001893,3.95e-13,29;UBERON:0002346,2.27e-12,64;UBERON:0003075,2.27e-12,64;UBERON:0007284,2.27e-12,64;UBERON:0002780,1.59e-11,39;UBERON:0001890,1.59e-11,39;UBERON:0006240,1.59e-11,39;UBERON:0010371,1.57e-10,73;UBERON:0003056,1.61e-10,49;UBERON:0004121,4.09e-10,95;UBERON:0000924,4.09e-10,95;UBERON:0006601,4.09e-10,95;UBERON:0010314,8.01e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.763991238884051,0.589257170947335,1.99320353118744,0,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0,0.511290967734173,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.693941307064543,0.304465478312141,0,0.301445281105245,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,2.30391377494801,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,0,0.869121600961382,0.255715457330331,0.41557608911912,0.973447578406546,0.407357455401265,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.90422890701429,0.408218994907967,0.640568601424249,0.749613796477831,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,0.841159794256509,0.411618449517138,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0.222798674082394,0,0,0.876767573733936,1.18586333383957,3.85585579706168,0,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76615448055303,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0.139951452323658,0,3.81868247206045,0,0.609958401380546,0.216010681643603,0,0,0.134864346384821,0,0,0,0,1.12738587736838,0,0,0,0.387479470433193,0.337912250981556,0,0.13020438484395,0,6.52277126230216,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,2.29158205375759,3.09335728218638,2.74033007908257,3.0215755895588,3.37511250115903,0.900642406448441,1.35942722695261,1.03552062350364,0,0.399024873401031,0.682934423016537,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0.943131706930381,0.187283014939765,0.384150914429216,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0.726732083161643,0.282328141245992,0.507687647350059,0.73171189149109,0.526139422875686,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0,0.385813221962283,0,0.467863216890817,0.429742108096597,0.765153328275374,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.763991238884051,0.589257170947335,1.99320353118744,0,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0,0.511290967734173,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.693941307064543,0.304465478312141,0,0.301445281105245,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,2.30391377494801,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,0,0.869121600961382,0.255715457330331,0.41557608911912,0.973447578406546,0.407357455401265,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.90422890701429,0.408218994907967,0.640568601424249,0.749613796477831,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,0.841159794256509,0.411618449517138,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0.222798674082394,0,0,0.876767573733936,1.18586333383957,3.85585579706168,0,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76615448055303,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0.139951452323658,0,3.81868247206045,0,0.609958401380546,0.216010681643603,0,0,0.134864346384821,0,0,0,0,1.12738587736838,0,0,0,0.387479470433193,0.337912250981556,0,0.13020438484395,0,6.52277126230216,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,2.29158205375759,3.09335728218638,2.74033007908257,3.0215755895588,3.37511250115903,0.900642406448441,1.35942722695261,1.03552062350364,0,0.399024873401031,0.682934423016537,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0.943131706930381,0.187283014939765,0.384150914429216,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0.726732083161643,0.282328141245992,0.507687647350059,0.73171189149109,0.526139422875686,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0,0.385813221962283,0,0.467863216890817,0.429742108096597,0.765153328275374,0,0 | ||
|short_description=p@chr15:26291955..26291956,+ | |short_description=p@chr15:26291955..26291956,+ | ||
}} | }} |
Latest revision as of 03:23, 5 August 2015
Short description: | p@chr15:26291955..26291956, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:26291955..26291956, + |
Coexpression cluster: | MCL_coexpression_mm9:733 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.10e-33 | 10 |
visual cortex | 3.10e-33 | 10 |
neocortex | 3.10e-33 | 10 |
regional part of cerebral cortex | 4.78e-19 | 17 |
brain | 7.31e-18 | 47 |
future brain | 7.31e-18 | 47 |
neural tube | 8.27e-16 | 52 |
neural rod | 8.27e-16 | 52 |
future spinal cord | 8.27e-16 | 52 |
neural keel | 8.27e-16 | 52 |
regional part of brain | 1.08e-15 | 46 |
cerebral cortex | 3.55e-15 | 21 |
cerebral hemisphere | 3.55e-15 | 21 |
pallium | 3.55e-15 | 21 |
regional part of nervous system | 3.94e-15 | 54 |
central nervous system | 5.07e-14 | 73 |
nervous system | 1.43e-13 | 75 |
gray matter | 2.37e-13 | 34 |
anterior neural tube | 2.46e-13 | 40 |
brain grey matter | 3.95e-13 | 29 |
regional part of telencephalon | 3.95e-13 | 29 |
telencephalon | 3.95e-13 | 29 |
neurectoderm | 2.27e-12 | 64 |
neural plate | 2.27e-12 | 64 |
presumptive neural plate | 2.27e-12 | 64 |
regional part of forebrain | 1.59e-11 | 39 |
forebrain | 1.59e-11 | 39 |
future forebrain | 1.59e-11 | 39 |
ecto-epithelium | 1.57e-10 | 73 |
pre-chordal neural plate | 1.61e-10 | 49 |
ectoderm-derived structure | 4.09e-10 | 95 |
ectoderm | 4.09e-10 | 95 |
presumptive ectoderm | 4.09e-10 | 95 |
structure with developmental contribution from neural crest | 8.01e-08 | 92 |