FFCP PHASE1:Mm9::chr19:44463324..44463335,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1643 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:44463324..44463335,+ | |||
|description=CAGE_peak_at_chr19:44463324..44463335,+ | |description=CAGE_peak_at_chr19:44463324..44463335,+ | ||
|id=chr19:44463324..44463335,+ | |id=chr19:44463324..44463335,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.83e-30,19;CL:0000988,5.04e-21,32;CL:0002032,5.04e-21,32;CL:0000037,5.04e-21,32;CL:0000837,5.04e-21,32;CL:0000763,2.53e-19,16;CL:0002320,4.32e-14,46;CL:0000134,4.32e-14,46;CL:0000050,6.21e-14,9;CL:0000219,9.79e-12,54;CL:0000034,6.15e-11,97;CL:0000839,1.33e-09,13;CL:0000553,2.33e-08,6;CL:0000556,2.33e-08,6;CL:0000723,2.18e-07,91;CL:0000048,2.18e-07,91;CL:0000764,2.40e-07,3;CL:0000765,2.40e-07,3;CL:0000038,2.40e-07,3;CL:0000547,2.40e-07,3;CL:0000557,4.21e-07,7;CL:0002031,6.59e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.10e-07,6;DOID:2531,2.40e-07,3;DOID:0060083,2.40e-07,3;DOID:1240,2.40e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.32e-14,46;UBERON:0002371,3.47e-11,16;UBERON:0001474,5.26e-08,22;UBERON:0004765,5.26e-08,22;UBERON:0001434,5.26e-08,22;UBERON:0002204,4.61e-07,32 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.809901069559304,0,4.88966356305268,4.2505474417779,5.51706547337439,0.0850432901510698,0.893618560807968,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,2.54012269383853,1.84519436275371,0,0.288851619751275,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,2.04913645487534,0.971020706062307,0.251793635951155,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,5.87239121202077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0.372798891650601,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0.662524555381181,0,0,0,0.209446706813455,0,2.27648736561249,4.19931911695385,3.68503658511888,0,0.457500602818626,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0,0.248813941220186,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0,7.02213187313235,4.37491442095016,1.98914449576915,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0.696710015581316,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.971122544619926,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0.388076051348264,0,0,0,0.658196082408484,0,0,0.63549621259146,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0.376736914009382,0.820165366326151,0.457556346413045,2.03974115992626,4.3384950220334,1.52019971184866,0,0,0,0,0.418176592028937,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0,0.201652370273681,0.292373642219257,0.0962118416403295,0.584384510907845,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.809901069559304,0,4.88966356305268,4.2505474417779,5.51706547337439,0.0850432901510698,0.893618560807968,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,2.54012269383853,1.84519436275371,0,0.288851619751275,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,2.04913645487534,0.971020706062307,0.251793635951155,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,5.87239121202077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0.372798891650601,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0.662524555381181,0,0,0,0.209446706813455,0,2.27648736561249,4.19931911695385,3.68503658511888,0,0.457500602818626,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0,0.248813941220186,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0,7.02213187313235,4.37491442095016,1.98914449576915,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0.696710015581316,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.971122544619926,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0.388076051348264,0,0,0,0.658196082408484,0,0,0.63549621259146,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0.376736914009382,0.820165366326151,0.457556346413045,2.03974115992626,4.3384950220334,1.52019971184866,0,0,0,0,0.418176592028937,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0,0.201652370273681,0.292373642219257,0.0962118416403295,0.584384510907845,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr19:44463324..44463335,+ | |short_description=p@chr19:44463324..44463335,+ | ||
}} | }} |
Latest revision as of 04:04, 4 August 2015
Short description: | p@chr19:44463324..44463335, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:44463324..44463335, + |
Coexpression cluster: | MCL_coexpression_mm9:1643 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.83e-30 | 19 |
hematopoietic cell | 5.04e-21 | 32 |
hematopoietic oligopotent progenitor cell | 5.04e-21 | 32 |
hematopoietic stem cell | 5.04e-21 | 32 |
hematopoietic multipotent progenitor cell | 5.04e-21 | 32 |
myeloid cell | 2.53e-19 | 16 |
connective tissue cell | 4.32e-14 | 46 |
mesenchymal cell | 4.32e-14 | 46 |
megakaryocyte-erythroid progenitor cell | 6.21e-14 | 9 |
motile cell | 9.79e-12 | 54 |
stem cell | 6.15e-11 | 97 |
myeloid lineage restricted progenitor cell | 1.33e-09 | 13 |
megakaryocyte progenitor cell | 2.33e-08 | 6 |
megakaryocyte | 2.33e-08 | 6 |
somatic stem cell | 2.18e-07 | 91 |
multi fate stem cell | 2.18e-07 | 91 |
erythroid lineage cell | 2.40e-07 | 3 |
erythroblast | 2.40e-07 | 3 |
erythroid progenitor cell | 2.40e-07 | 3 |
proerythroblast | 2.40e-07 | 3 |
granulocyte monocyte progenitor cell | 4.21e-07 | 7 |
hematopoietic lineage restricted progenitor cell | 6.59e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.32e-14 | 46 |
bone marrow | 3.47e-11 | 16 |
bone element | 5.26e-08 | 22 |
skeletal element | 5.26e-08 | 22 |
skeletal system | 5.26e-08 | 22 |
musculoskeletal system | 4.61e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.10e-07 | 6 |
hematologic cancer | 2.40e-07 | 3 |
immune system cancer | 2.40e-07 | 3 |
leukemia | 2.40e-07 | 3 |