FFCP PHASE1:Hg19::chr11:66103136..66103189,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9610 | |EntrezGene=9610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18749 | |HGNC=18749 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528006,ENST00000534824,uc010roy.1_5end | |association_with_transcript=0bp_to_ENST00000528006,ENST00000534824,uc010roy.1_5end | ||
|cluster_id=chr11:66103136..66103189,- | |||
|coexpression_cluster_id=C1641 | |||
|description=CAGE_peak_2_at_RIN1_5end | |description=CAGE_peak_2_at_RIN1_5end | ||
|id=chr11:66103136..66103189,- | |id=chr11:66103136..66103189,- | ||
|ontology_enrichment_celltype=CL:0000055!5.63e-39!180;CL:0000183!8.31e-24!59;CL:0000680!4.42e-22!57;CL:0000056!4.42e-22!57;CL:0000355!4.42e-22!57;CL:0002371!1.09e-21!591;CL:0000187!1.56e-21!54;CL:0000144!2.76e-20!625;CL:0000057!5.71e-19!75;CL:0000393!4.08e-17!60;CL:0000211!4.08e-17!60;CL:0000192!7.33e-17!42;CL:0000514!7.33e-17!42;CL:0000548!6.50e-16!679;CL:0000004!6.50e-16!679;CL:0000255!6.50e-16!679;CL:0000012!3.20e-15!682;CL:0000222!3.34e-15!119;CL:0000220!1.19e-13!246;CL:0002321!2.45e-13!248;CL:0000359!5.37e-12!32;CL:0000003!3.02e-09!722;CL:0002620!6.25e-09!23;CL:0000048!1.49e-07!430;CL:0000723!1.67e-07!436;CL:0000188!9.18e-07!9;CL:0000034!9.18e-07!444 | |ontology_enrichment_celltype=CL:0000055!5.63e-39!180;CL:0000183!8.31e-24!59;CL:0000680!4.42e-22!57;CL:0000056!4.42e-22!57;CL:0000355!4.42e-22!57;CL:0002371!1.09e-21!591;CL:0000187!1.56e-21!54;CL:0000144!2.76e-20!625;CL:0000057!5.71e-19!75;CL:0000393!4.08e-17!60;CL:0000211!4.08e-17!60;CL:0000192!7.33e-17!42;CL:0000514!7.33e-17!42;CL:0000548!6.50e-16!679;CL:0000004!6.50e-16!679;CL:0000255!6.50e-16!679;CL:0000012!3.20e-15!682;CL:0000222!3.34e-15!119;CL:0000220!1.19e-13!246;CL:0002321!2.45e-13!248;CL:0000359!5.37e-12!32;CL:0000003!3.02e-09!722;CL:0002620!6.25e-09!23;CL:0000048!1.49e-07!430;CL:0000723!1.67e-07!436;CL:0000188!9.18e-07!9;CL:0000034!9.18e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.88e-15;55!CL:0000192;2.20e-14;43!CL:0000393;1.81e-12;61!CL:0000211;1.81e-12;61!CL:0000359;3.67e-12;32!CL:0002620;1.53e-10;23!CL:0000188;4.46e-09;9!CL:0002570;1.08e-08;8!CL:0002320;6.94e-08;188!CL:0000057;1.21e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,3.36e-27,55;CL:0000680,4.57e-27,58;CL:0000056,4.57e-27,58;CL:0000355,4.57e-27,58;CL:0000393,8.90e-23,61;CL:0000211,8.90e-23,61;CL:0000192,1.22e-20,43;CL:0000514,1.22e-20,43;CL:0000057,7.17e-20,76;CL:0000048,4.83e-17,427;CL:0000723,5.06e-17,433;CL:0000034,7.45e-16,441;CL:0000222,3.21e-14,121;CL:0000359,6.09e-13,32;CL:0002321,5.79e-11,250;CL:0002620,1.21e-10,23;CL:0000188,3.36e-09,9;CL:0002570,9.29e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000355;4.22e-15;58!CL:0000514;2.20e-14;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.14e-24!83;UBERON:0002329!1.14e-24!83;UBERON:0003077!1.14e-24!83;UBERON:0003059!1.14e-24!83;UBERON:0007282!1.14e-24!83;UBERON:0009618!1.14e-24!83;UBERON:0007285!1.14e-24!83;UBERON:0004290!8.39e-23!70;UBERON:0000486!3.73e-21!82;UBERON:0001134!2.77e-19!61;UBERON:0002036!2.77e-19!61;UBERON:0003082!2.77e-19!61;UBERON:0002385!2.50e-18!63;UBERON:0001015!2.50e-18!63;UBERON:0000383!2.50e-18!63;UBERON:0005256!1.23e-15!143;UBERON:0002049!8.14e-15!79;UBERON:0007798!8.14e-15!79;UBERON:0000490!9.49e-14!138;UBERON:0001981!7.15e-13!60;UBERON:0007500!7.15e-13!60;UBERON:0004537!7.15e-13!60;UBERON:0006965!7.15e-13!60;UBERON:0004872!1.02e-12!84;UBERON:0000475!1.77e-12!365;UBERON:0003102!2.05e-12!95;UBERON:0002100!7.10e-12!216;UBERON:0001637!1.68e-11!42;UBERON:0003509!1.68e-11!42;UBERON:0004572!1.68e-11!42;UBERON:0003104!5.55e-11!238;UBERON:0009142!5.55e-11!238;UBERON:0000055!1.10e-10!69;UBERON:0004535!2.02e-10!110;UBERON:0000926!2.51e-10!448;UBERON:0004120!2.51e-10!448;UBERON:0006603!2.51e-10!448;UBERON:0000119!3.62e-10!312;UBERON:0000468!5.49e-10!659;UBERON:0000481!5.73e-10!347;UBERON:0002204!6.23e-10!167;UBERON:0004573!9.86e-10!33;UBERON:0004571!9.86e-10!33;UBERON:0001009!1.09e-09!113;UBERON:0000467!1.30e-09!625;UBERON:0000483!1.73e-09!309;UBERON:0000480!1.96e-09!626;UBERON:0003914!2.55e-09!118;UBERON:0002199!8.71e-09!45;UBERON:0002416!8.71e-09!45;UBERON:0000923!2.88e-08!604;UBERON:0005291!2.88e-08!604;UBERON:0006598!2.88e-08!604;UBERON:0002532!2.88e-08!604;UBERON:0002050!4.19e-08!605;UBERON:0005423!4.19e-08!605;UBERON:0002097!6.03e-08!40;UBERON:0000479!6.76e-08!787;UBERON:0000922!1.62e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002204;2.45e-09;70!UBERON:0002385;2.54e-09;31!UBERON:0001015;2.54e-09;31!UBERON:0000383;2.54e-09;31!UBERON:0004573;2.41e-08;33!UBERON:0004571;2.41e-08;33!UBERON:0004765;1.33e-07;26!UBERON:0001434;1.96e-07;36!UBERON:0003102;4.09e-07;50!UBERON:0011135;7.26e-07;5!UBERON:0002216;7.26e-07;5!UBERON:0011134;7.26e-07;5!UBERON:0002209;7.26e-07;5!UBERON:0002213;7.26e-07;5!UBERON:0007844;7.26e-07;5!UBERON:0011138;7.26e-07;5!UBERON:0001130;7.26e-07;5!UBERON:0001066;7.26e-07;5!UBERON:0001468;7.26e-07;5 | |||
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| ||
|short_description=p2@RIN1 | |short_description=p2@RIN1 | ||
}} | }} |
Latest revision as of 14:05, 19 September 2015
Short description: | p2@RIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIN1_5end |
Coexpression cluster: | C1641_Mesenchymal_Nucleus_Fibroblast_tenocyte_Pericytes_normal_Smooth |
Association with transcript: | 0bp_to_ENST00000528006, ENST00000534824, uc010roy.1_5end |
EntrezGene: | RIN1 |
HGNC: | 18749 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 3.36e-27 | 55 |
muscle precursor cell | 4.57e-27 | 58 |
myoblast | 4.57e-27 | 58 |
multi-potent skeletal muscle stem cell | 4.57e-27 | 58 |
electrically responsive cell | 8.90e-23 | 61 |
electrically active cell | 8.90e-23 | 61 |
smooth muscle cell | 1.22e-20 | 43 |
smooth muscle myoblast | 1.22e-20 | 43 |
fibroblast | 7.17e-20 | 76 |
multi fate stem cell | 4.83e-17 | 427 |
somatic stem cell | 5.06e-17 | 433 |
stem cell | 7.45e-16 | 441 |
mesodermal cell | 3.21e-14 | 121 |
vascular associated smooth muscle cell | 6.09e-13 | 32 |
embryonic cell | 5.79e-11 | 250 |
skin fibroblast | 1.21e-10 | 23 |
cell of skeletal muscle | 3.36e-09 | 9 |
mesenchymal stem cell of adipose | 9.29e-09 | 8 |