FFCP PHASE1:Mm9::chr15:76352799..76352809,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170729 | |EntrezGene=170729 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q99M85 | |UniProt=Q99M85 | ||
|association_with_transcript=-240bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end | |association_with_transcript=-240bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end | ||
|cluster_id=chr15:76352799..76352809,- | |||
|description=CAGE_peak_7_at_Scrt1_5end | |description=CAGE_peak_7_at_Scrt1_5end | ||
|id=chr15:76352799..76352809,- | |id=chr15:76352799..76352809,- | ||
|ontology_enrichment_celltype=CL:0000117!1.37e-22!23;CL:0000337!1.37e-22!23;CL:0000540!3.96e-17!33;CL:0000047!3.96e-17!33;CL:0000031!3.96e-17!33;CL:0000404!3.96e-17!33;CL:0000393!1.58e-13!39;CL:0000211!1.58e-13!39;CL:0002319!1.06e-11!43;CL:0000221!2.67e-11!44;CL:0000133!2.67e-11!44;CL:0002609!6.29e-11!6;CL:0000055!3.08e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.37e-22!23;CL:0000337!1.37e-22!23;CL:0000540!3.96e-17!33;CL:0000047!3.96e-17!33;CL:0000031!3.96e-17!33;CL:0000404!3.96e-17!33;CL:0000393!1.58e-13!39;CL:0000211!1.58e-13!39;CL:0002319!1.06e-11!43;CL:0000221!2.67e-11!44;CL:0000133!2.67e-11!44;CL:0002609!6.29e-11!6;CL:0000055!3.08e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.13e-28,6;CL:0000117,1.14e-28,23;CL:0000337,1.14e-28,23;CL:0000120,4.57e-21,3;CL:0000540,1.00e-19,33;CL:0000047,1.00e-19,33;CL:0000031,1.00e-19,33;CL:0000404,1.00e-19,33;CL:0000393,1.50e-16,39;CL:0000211,1.50e-16,39;CL:0002319,6.36e-15,43;CL:0000221,1.46e-14,44;CL:0000133,1.46e-14,44;CL:0002608,1.75e-10,3;CL:0002321,8.98e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.46e-17!71;UBERON:0003075!3.46e-17!71;UBERON:0007284!3.46e-17!71;UBERON:0001017!2.39e-16!73;UBERON:0005743!2.39e-16!73;UBERON:0000073!1.18e-15!75;UBERON:0001016!1.18e-15!75;UBERON:0001049!2.11e-15!52;UBERON:0005068!2.11e-15!52;UBERON:0006241!2.11e-15!52;UBERON:0007135!2.11e-15!52;UBERON:0004121!9.89e-15!102;UBERON:0000924!9.89e-15!102;UBERON:0006601!9.89e-15!102;UBERON:0002020!1.15e-14!34;UBERON:0000033!1.89e-14!63;UBERON:0003056!1.06e-12!49;UBERON:0002616!5.35e-11!49;UBERON:0000955!1.19e-10!50;UBERON:0006238!1.19e-10!50;UBERON:0002791!1.97e-09!29;UBERON:0003528!1.97e-09!29;UBERON:0001893!1.97e-09!29;UBERON:0002240!4.53e-09!6;UBERON:0005174!4.53e-09!6;UBERON:0001137!4.53e-09!6;UBERON:0002780!5.76e-09!39;UBERON:0001890!5.76e-09!39;UBERON:0006240!5.76e-09!39;UBERON:0003076!7.58e-09!12;UBERON:0003057!7.58e-09!12;UBERON:0003080!1.27e-08!40;UBERON:0000369!1.37e-08!5;UBERON:0002435!1.37e-08!5;UBERON:0000204!1.37e-08!5;UBERON:0010082!1.37e-08!5;UBERON:0007811!1.99e-08!86;UBERON:0001948!3.19e-08!5;UBERON:0002315!3.19e-08!5;UBERON:0000153!4.57e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.35e-12,34;UBERON:0003528,3.78e-11,29;UBERON:0002791,3.78e-11,29;UBERON:0001893,3.78e-11,29;UBERON:0001017,2.96e-10,73;UBERON:0001016,5.96e-10,75;UBERON:0004121,3.42e-09,95;UBERON:0000924,3.42e-09,95;UBERON:0006601,3.42e-09,95;UBERON:0003056,2.89e-08,49;UBERON:0000956,3.35e-08,21;UBERON:0001869,3.35e-08,21;UBERON:0000203,3.35e-08,21;UBERON:0002780,3.75e-08,39;UBERON:0001890,3.75e-08,39;UBERON:0006240,3.75e-08,39;UBERON:0003080,6.19e-08,40;UBERON:0002346,9.00e-08,64;UBERON:0003075,9.00e-08,64;UBERON:0007284,9.00e-08,64;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0000073,2.07e-07,54;UBERON:0002616,7.97e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,2.17748185847803,1.08004750665353,1.26194976810829,0.571301968807607,0.662605622854841,3.1847607795888,2.39613677545591,0.919218786610021,0,0.255374676170375,0.153606533256243,0.791317726381163,1.73826522844578,0.52091337055676,0,0,0,0.294628585473668,0.854230084794618,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0,0.457500602818626,1.7591609295801,0.173824320192276,0,0,0,0,0,0,0,0,0,1.26043490863744,0.452114453507145,0.748401490664606,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,2.17748185847803,1.08004750665353,1.26194976810829,0.571301968807607,0.662605622854841,3.1847607795888,2.39613677545591,0.919218786610021,0,0.255374676170375,0.153606533256243,0.791317726381163,1.73826522844578,0.52091337055676,0,0,0,0.294628585473668,0.854230084794618,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0,0.457500602818626,1.7591609295801,0.173824320192276,0,0,0,0,0,0,0,0,0,1.26043490863744,0.452114453507145,0.748401490664606,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0 | ||
|short_description=p7@Scrt1 | |short_description=p7@Scrt1 | ||
}} | }} |
Latest revision as of 00:49, 27 September 2015
Short description: | p7@Scrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Scrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -240bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end |
EntrezGene: | Scrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.13e-28 | 6 |
CNS neuron (sensu Vertebrata) | 1.14e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-28 | 23 |
granule cell | 4.57e-21 | 3 |
neuron | 1.00e-19 | 33 |
neuronal stem cell | 1.00e-19 | 33 |
neuroblast | 1.00e-19 | 33 |
electrically signaling cell | 1.00e-19 | 33 |
electrically responsive cell | 1.50e-16 | 39 |
electrically active cell | 1.50e-16 | 39 |
neural cell | 6.36e-15 | 43 |
ectodermal cell | 1.46e-14 | 44 |
neurectodermal cell | 1.46e-14 | 44 |
hippocampal neuron | 1.75e-10 | 3 |
embryonic cell | 8.98e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.35e-12 | 34 |
brain grey matter | 3.78e-11 | 29 |
regional part of telencephalon | 3.78e-11 | 29 |
telencephalon | 3.78e-11 | 29 |
central nervous system | 2.96e-10 | 73 |
nervous system | 5.96e-10 | 75 |
ectoderm-derived structure | 3.42e-09 | 95 |
ectoderm | 3.42e-09 | 95 |
presumptive ectoderm | 3.42e-09 | 95 |
pre-chordal neural plate | 2.89e-08 | 49 |
cerebral cortex | 3.35e-08 | 21 |
cerebral hemisphere | 3.35e-08 | 21 |
pallium | 3.35e-08 | 21 |
regional part of forebrain | 3.75e-08 | 39 |
forebrain | 3.75e-08 | 39 |
future forebrain | 3.75e-08 | 39 |
anterior neural tube | 6.19e-08 | 40 |
neurectoderm | 9.00e-08 | 64 |
neural plate | 9.00e-08 | 64 |
presumptive neural plate | 9.00e-08 | 64 |
neural tube | 1.00e-07 | 52 |
neural rod | 1.00e-07 | 52 |
future spinal cord | 1.00e-07 | 52 |
neural keel | 1.00e-07 | 52 |
regional part of nervous system | 2.07e-07 | 54 |
regional part of brain | 7.97e-07 | 46 |