FFCP PHASE1:Mm9::chr15:95485111..95485120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=428 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:95485111..95485120,- | |||
|description=CAGE_peak_at_chr15:95485111..95485120,- | |description=CAGE_peak_at_chr15:95485111..95485120,- | ||
|id=chr15:95485111..95485120,- | |id=chr15:95485111..95485120,- | ||
|ontology_enrichment_celltype=CL:0000117!5.19e-10!23;CL:0000337!5.19e-10!23;CL:0000221!8.40e-09!44;CL:0000133!8.40e-09!44;CL:0002319!5.24e-08!43 | |ontology_enrichment_celltype=CL:0000117!5.19e-10!23;CL:0000337!5.19e-10!23;CL:0000221!8.40e-09!44;CL:0000133!8.40e-09!44;CL:0002319!5.24e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.45e-15,2;CL:0000878,8.97e-15,2;CL:0000129,8.97e-15,2;CL:0002610,3.67e-10,3;CL:0002194,7.72e-08,4;CL:0000766,7.72e-08,4;CL:0000234,7.72e-08,4;CL:0000576,7.72e-08,4;CL:0000235,7.72e-08,4;CL:0000864,7.72e-08,4;CL:0002009,7.72e-08,4;CL:0000040,7.72e-08,4;CL:0000559,7.72e-08,4;CL:0000117,1.45e-07,23;CL:0000337,1.45e-07,23;CL:0002319,2.00e-07,43;CL:0000221,3.04e-07,44;CL:0000133,3.04e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.68e-22!73;UBERON:0005743!5.68e-22!73;UBERON:0000073!3.73e-21!75;UBERON:0001016!3.73e-21!75;UBERON:0001049!4.00e-21!52;UBERON:0005068!4.00e-21!52;UBERON:0006241!4.00e-21!52;UBERON:0007135!4.00e-21!52;UBERON:0002020!3.34e-16!34;UBERON:0002616!1.74e-15!49;UBERON:0004121!2.30e-15!102;UBERON:0000924!2.30e-15!102;UBERON:0006601!2.30e-15!102;UBERON:0000955!4.72e-15!50;UBERON:0006238!4.72e-15!50;UBERON:0003076!5.22e-15!12;UBERON:0003057!5.22e-15!12;UBERON:0002346!1.04e-14!71;UBERON:0003075!1.04e-14!71;UBERON:0007284!1.04e-14!71;UBERON:0000033!6.21e-13!63;UBERON:0002240!3.11e-12!6;UBERON:0005174!3.11e-12!6;UBERON:0001137!3.11e-12!6;UBERON:0002298!1.20e-11!6;UBERON:0001948!2.38e-10!5;UBERON:0002315!2.38e-10!5;UBERON:0003080!5.92e-10!40;UBERON:0002791!9.16e-10!29;UBERON:0003528!9.16e-10!29;UBERON:0001893!9.16e-10!29;UBERON:0002780!6.99e-09!39;UBERON:0001890!6.99e-09!39;UBERON:0006240!6.99e-09!39;UBERON:0003056!2.47e-08!49;UBERON:0002950!2.58e-08!4;UBERON:0001891!2.58e-08!4;UBERON:0009616!2.58e-08!4;UBERON:0007811!8.50e-08!86;UBERON:0000153!1.90e-07!94;UBERON:0002021!8.36e-07!10;UBERON:0000411!8.36e-07!10;UBERON:0001950!8.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.05e-19,6;UBERON:0005174,7.05e-19,6;UBERON:0001137,7.05e-19,6;UBERON:0002256,3.45e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0003076,2.38e-14,12;UBERON:0003057,2.38e-14,12;UBERON:0001016,3.42e-14,75;UBERON:0001948,2.87e-13,5;UBERON:0002315,2.87e-13,5;UBERON:0000073,1.35e-11,54;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0004684,3.67e-10,3;UBERON:0002275,3.67e-10,3;UBERON:0001049,1.09e-09,52;UBERON:0005068,1.09e-09,52;UBERON:0006241,1.09e-09,52;UBERON:0007135,1.09e-09,52;UBERON:0002259,6.57e-08,1;UBERON:0002314,6.57e-08,1;UBERON:0004061,6.57e-08,1;UBERON:0006777,6.57e-08,1;UBERON:0005882,6.57e-08,1;UBERON:0002346,1.07e-07,64;UBERON:0003075,1.07e-07,64;UBERON:0007284,1.07e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,1.19840044207362,3.45796474789399,0,0,0,5.14171771926846,1.76694832761291,0,0,0,0,1.27687338085188,1.84327839907492,0.131886287730194,0,0,0.558365998002762,0.56276261003168,0.61119299110724,1.47314292736834,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,0,0.521472960576829,0.255715457330331,1.0389402227978,0.648965052271031,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,1.5107877947794,0.675022500231806,0,0,1.03552062350364,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.290692833264657,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,1.19840044207362,3.45796474789399,0,0,0,5.14171771926846,1.76694832761291,0,0,0,0,1.27687338085188,1.84327839907492,0.131886287730194,0,0,0.558365998002762,0.56276261003168,0.61119299110724,1.47314292736834,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,0,0.521472960576829,0.255715457330331,1.0389402227978,0.648965052271031,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,1.5107877947794,0.675022500231806,0,0,1.03552062350364,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.290692833264657,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:95485111..95485120,- | |short_description=p@chr15:95485111..95485120,- | ||
}} | }} |
Latest revision as of 21:33, 5 August 2015
Short description: | p@chr15:95485111..95485120, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:95485111..95485120, - |
Coexpression cluster: | MCL_coexpression_mm9:428 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.45e-15 | 2 |
central nervous system macrophage | 8.97e-15 | 2 |
microglial cell | 8.97e-15 | 2 |
raphe nuclei neuron | 3.67e-10 | 3 |
monopoietic cell | 7.72e-08 | 4 |
myeloid leukocyte | 7.72e-08 | 4 |
phagocyte | 7.72e-08 | 4 |
monocyte | 7.72e-08 | 4 |
macrophage | 7.72e-08 | 4 |
tissue-resident macrophage | 7.72e-08 | 4 |
macrophage dendritic cell progenitor | 7.72e-08 | 4 |
monoblast | 7.72e-08 | 4 |
promonocyte | 7.72e-08 | 4 |
CNS neuron (sensu Vertebrata) | 1.45e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-07 | 23 |
neural cell | 2.00e-07 | 43 |
ectodermal cell | 3.04e-07 | 44 |
neurectodermal cell | 3.04e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.05e-19 | 6 |
dorsal region element | 7.05e-19 | 6 |
dorsum | 7.05e-19 | 6 |
dorsal horn of spinal cord | 3.45e-15 | 2 |
central nervous system | 1.30e-14 | 73 |
posterior neural tube | 2.38e-14 | 12 |
chordal neural plate | 2.38e-14 | 12 |
nervous system | 3.42e-14 | 75 |
regional part of spinal cord | 2.87e-13 | 5 |
gray matter of spinal cord | 2.87e-13 | 5 |
regional part of nervous system | 1.35e-11 | 54 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
raphe nuclei | 3.67e-10 | 3 |
reticular formation | 3.67e-10 | 3 |
neural tube | 1.09e-09 | 52 |
neural rod | 1.09e-09 | 52 |
future spinal cord | 1.09e-09 | 52 |
neural keel | 1.09e-09 | 52 |
corpora quadrigemina | 6.57e-08 | 1 |
midbrain tectum | 6.57e-08 | 1 |
neural tube mantle layer | 6.57e-08 | 1 |
tectal plate | 6.57e-08 | 1 |
neural tube alar plate | 6.57e-08 | 1 |
neurectoderm | 1.07e-07 | 64 |
neural plate | 1.07e-07 | 64 |
presumptive neural plate | 1.07e-07 | 64 |