FFCP PHASE1:Mm9::chr16:74412361..74412376,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268902 | |EntrezGene=268902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-291bp_to_ENSMUST00000156010_5end | |association_with_transcript=-291bp_to_ENSMUST00000156010_5end | ||
|cluster_id=chr16:74412361..74412376,- | |||
|description=CAGE_peak_7_at_Robo2_5end | |description=CAGE_peak_7_at_Robo2_5end | ||
|id=chr16:74412361..74412376,- | |id=chr16:74412361..74412376,- | ||
|ontology_enrichment_celltype=CL:0000117!4.22e-13!23;CL:0000337!4.22e-13!23;CL:0000540!6.50e-10!33;CL:0000047!6.50e-10!33;CL:0000031!6.50e-10!33;CL:0000404!6.50e-10!33;CL:0000393!4.08e-07!39;CL:0000211!4.08e-07!39;CL:0000221!4.75e-07!44;CL:0000133!4.75e-07!44;CL:0002609!6.63e-07!6;CL:0002319!9.00e-07!43 | |ontology_enrichment_celltype=CL:0000117!4.22e-13!23;CL:0000337!4.22e-13!23;CL:0000540!6.50e-10!33;CL:0000047!6.50e-10!33;CL:0000031!6.50e-10!33;CL:0000404!6.50e-10!33;CL:0000393!4.08e-07!39;CL:0000211!4.08e-07!39;CL:0000221!4.75e-07!44;CL:0000133!4.75e-07!44;CL:0002609!6.63e-07!6;CL:0002319!9.00e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.93e-25,23;CL:0000337,5.93e-25,23;CL:0000540,5.26e-16,33;CL:0000047,5.26e-16,33;CL:0000031,5.26e-16,33;CL:0000404,5.26e-16,33;CL:0002609,1.34e-13,6;CL:0000393,7.42e-13,39;CL:0000211,7.42e-13,39;CL:0002319,2.98e-11,43;CL:0000221,6.74e-11,44;CL:0000133,6.74e-11,44;CL:0002608,5.95e-08,3;CL:0000120,9.37e-08,3;CL:0002613,9.37e-08,3;CL:0002612,2.90e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.85e-12!49;UBERON:0002346!1.60e-11!71;UBERON:0003075!1.60e-11!71;UBERON:0007284!1.60e-11!71;UBERON:0000033!2.44e-10!63;UBERON:0001049!3.11e-10!52;UBERON:0005068!3.11e-10!52;UBERON:0006241!3.11e-10!52;UBERON:0007135!3.11e-10!52;UBERON:0004121!7.63e-10!102;UBERON:0000924!7.63e-10!102;UBERON:0006601!7.63e-10!102;UBERON:0002020!1.15e-09!34;UBERON:0001017!2.61e-09!73;UBERON:0005743!2.61e-09!73;UBERON:0000073!3.70e-09!75;UBERON:0001016!3.70e-09!75;UBERON:0003080!8.50e-09!40;UBERON:0002780!1.72e-08!39;UBERON:0001890!1.72e-08!39;UBERON:0006240!1.72e-08!39;UBERON:0002616!1.23e-07!49;UBERON:0000955!2.68e-07!50;UBERON:0006238!2.68e-07!50;UBERON:0000153!7.05e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.03e-15,34;UBERON:0002346,7.31e-12,64;UBERON:0003075,7.31e-12,64;UBERON:0007284,7.31e-12,64;UBERON:0001948,1.21e-10,5;UBERON:0002315,1.21e-10,5;UBERON:0001049,1.80e-10,52;UBERON:0005068,1.80e-10,52;UBERON:0006241,1.80e-10,52;UBERON:0007135,1.80e-10,52;UBERON:0000073,6.57e-10,54;UBERON:0010371,1.05e-09,73;UBERON:0003056,1.39e-09,49;UBERON:0001017,3.49e-09,73;UBERON:0004121,6.06e-09,95;UBERON:0000924,6.06e-09,95;UBERON:0006601,6.06e-09,95;UBERON:0002240,8.51e-09,6;UBERON:0005174,8.51e-09,6;UBERON:0001137,8.51e-09,6;UBERON:0001016,8.54e-09,75;UBERON:0003528,1.52e-08,29;UBERON:0002791,1.52e-08,29;UBERON:0001893,1.52e-08,29;UBERON:0002780,9.20e-08,39;UBERON:0001890,9.20e-08,39;UBERON:0006240,9.20e-08,39;UBERON:0000369,1.01e-07,5;UBERON:0002435,1.01e-07,5;UBERON:0000204,1.01e-07,5;UBERON:0010082,1.01e-07,5;UBERON:0003080,1.73e-07,40;UBERON:0002257,2.90e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.45096213891115,6.34789175126439,13.3104594736298,0,0,0,0,0,0,0,5.18448061542388,3.37514845829227,2.73422449756797,1.71390590642282,1.76694832761291,8.20688354740192,6.51749202924007,9.19218786610021,0,0.127687338085188,0.153606533256243,9.49581271657396,5.39777097254217,5.73004707612436,0,0,0.15279824777681,2.35702868378934,1.85083185038834,6.89677949553612,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,4.52355667606312,0.173824320192276,0.255715457330331,0,0,0,0.124406970610093,0,0.210441855886474,0.780722657776222,0.459804208866946,1.44049703844279,0.90422890701429,1.63287597963187,1.0249097622788,1.03071897015702,0,4.31135985865684,6.24050064553804,1.75951124163949,0.43839146485515,1.39023624612799,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0.853153002140936,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,1.70701110857774,1.82797620175566,0,1.22190796707189,1.35766741017338,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.339490171550376,0,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,0.517434735131018,1.07168517515796,0.709360934569094,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.807322133479528,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,1.35004500046361,0.45032120322422,0,0,0.830298780673413,6.78342284781753,2.90247129782028,2.18796045361465,1.04806581313991,0.919217542250071,1.11123363900808,1.03017528619447,1.92551525755089,0,0.25347929989024,1.13175804831646,0.749132059759059,1.08842759088278,0.861532034334199,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.752875043322645,0.676916863133412,0.914639864363863,0.789209134313529,0.950628796921032,0,1.06771516311757,0.492522411877817,0,0.77468420592983,0.192906610981141,1.24905288968973,0.935726433781634,0.859484216193193,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.45096213891115,6.34789175126439,13.3104594736298,0,0,0,0,0,0,0,5.18448061542388,3.37514845829227,2.73422449756797,1.71390590642282,1.76694832761291,8.20688354740192,6.51749202924007,9.19218786610021,0,0.127687338085188,0.153606533256243,9.49581271657396,5.39777097254217,5.73004707612436,0,0,0.15279824777681,2.35702868378934,1.85083185038834,6.89677949553612,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,4.52355667606312,0.173824320192276,0.255715457330331,0,0,0,0.124406970610093,0,0.210441855886474,0.780722657776222,0.459804208866946,1.44049703844279,0.90422890701429,1.63287597963187,1.0249097622788,1.03071897015702,0,4.31135985865684,6.24050064553804,1.75951124163949,0.43839146485515,1.39023624612799,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0.853153002140936,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,1.70701110857774,1.82797620175566,0,1.22190796707189,1.35766741017338,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.339490171550376,0,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,0.517434735131018,1.07168517515796,0.709360934569094,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.807322133479528,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,1.35004500046361,0.45032120322422,0,0,0.830298780673413,6.78342284781753,2.90247129782028,2.18796045361465,1.04806581313991,0.919217542250071,1.11123363900808,1.03017528619447,1.92551525755089,0,0.25347929989024,1.13175804831646,0.749132059759059,1.08842759088278,0.861532034334199,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.752875043322645,0.676916863133412,0.914639864363863,0.789209134313529,0.950628796921032,0,1.06771516311757,0.492522411877817,0,0.77468420592983,0.192906610981141,1.24905288968973,0.935726433781634,0.859484216193193,0.191288332068843,0,0 | ||
|short_description=p7@Robo2 | |short_description=p7@Robo2 | ||
}} | }} |
Latest revision as of 17:58, 25 September 2015
Short description: | p7@Robo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Robo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -291bp_to_ENSMUST00000156010_5end |
EntrezGene: | Robo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.93e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.93e-25 | 23 |
neuron | 5.26e-16 | 33 |
neuronal stem cell | 5.26e-16 | 33 |
neuroblast | 5.26e-16 | 33 |
electrically signaling cell | 5.26e-16 | 33 |
neuron of cerebral cortex | 1.34e-13 | 6 |
electrically responsive cell | 7.42e-13 | 39 |
electrically active cell | 7.42e-13 | 39 |
neural cell | 2.98e-11 | 43 |
ectodermal cell | 6.74e-11 | 44 |
neurectodermal cell | 6.74e-11 | 44 |
hippocampal neuron | 5.95e-08 | 3 |
granule cell | 9.37e-08 | 3 |
striatum neuron | 9.37e-08 | 3 |
neuron of the ventral spinal cord | 2.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 8.03e-15 | 34 |
neurectoderm | 7.31e-12 | 64 |
neural plate | 7.31e-12 | 64 |
presumptive neural plate | 7.31e-12 | 64 |
regional part of spinal cord | 1.21e-10 | 5 |
gray matter of spinal cord | 1.21e-10 | 5 |
neural tube | 1.80e-10 | 52 |
neural rod | 1.80e-10 | 52 |
future spinal cord | 1.80e-10 | 52 |
neural keel | 1.80e-10 | 52 |
regional part of nervous system | 6.57e-10 | 54 |
ecto-epithelium | 1.05e-09 | 73 |
pre-chordal neural plate | 1.39e-09 | 49 |
central nervous system | 3.49e-09 | 73 |
ectoderm-derived structure | 6.06e-09 | 95 |
ectoderm | 6.06e-09 | 95 |
presumptive ectoderm | 6.06e-09 | 95 |
spinal cord | 8.51e-09 | 6 |
dorsal region element | 8.51e-09 | 6 |
dorsum | 8.51e-09 | 6 |
nervous system | 8.54e-09 | 75 |
brain grey matter | 1.52e-08 | 29 |
regional part of telencephalon | 1.52e-08 | 29 |
telencephalon | 1.52e-08 | 29 |
regional part of forebrain | 9.20e-08 | 39 |
forebrain | 9.20e-08 | 39 |
future forebrain | 9.20e-08 | 39 |
corpus striatum | 1.01e-07 | 5 |
striatum | 1.01e-07 | 5 |
ventral part of telencephalon | 1.01e-07 | 5 |
future corpus striatum | 1.01e-07 | 5 |
anterior neural tube | 1.73e-07 | 40 |
ventral horn of spinal cord | 2.90e-07 | 3 |