FFCP PHASE1:Mm9::chr17:34404912..34404919,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14961 | |EntrezGene=14961 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-295bp_to_ENSMUST00000174875_5end | |association_with_transcript=-295bp_to_ENSMUST00000174875_5end | ||
|cluster_id=chr17:34404912..34404919,+ | |||
|description=CAGE_peak_13_at_H2-Ab1_5end | |description=CAGE_peak_13_at_H2-Ab1_5end | ||
|id=chr17:34404912..34404919,+ | |id=chr17:34404912..34404919,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000839,7.26e-13,13;CL:0000553,1.08e-12,6;CL:0000556,1.08e-12,6;CL:0002031,7.02e-12,25;CL:0000763,1.31e-10,16;CL:0002476,6.19e-10,2;CL:0000988,2.00e-09,32;CL:0002032,2.00e-09,32;CL:0000037,2.00e-09,32;CL:0000837,2.00e-09,32;CL:0000049,4.68e-09,19;CL:0000050,8.40e-09,9;CL:0002320,9.87e-07,46;CL:0000134,9.87e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.50e-12!48;UBERON:0002390!1.07e-10!45;UBERON:0003061!1.07e-10!45;UBERON:0002370!5.38e-08!23;UBERON:0000974!5.38e-08!23;UBERON:0004807!5.38e-08!23;UBERON:0005058!5.38e-08!23;UBERON:0003351!5.38e-08!23;UBERON:0009113!5.38e-08!23;UBERON:0003295!5.38e-08!23;UBERON:0009722!5.38e-08!23;UBERON:0005562!5.38e-08!23;UBERON:0007690!5.38e-08!23;UBERON:0006562!1.43e-07!24;UBERON:0003408!1.43e-07!24;UBERON:0001557!1.43e-07!24;UBERON:0001042!1.43e-07!24;UBERON:0008814!1.43e-07!24;UBERON:0009145!1.43e-07!24;UBERON:0004177!3.08e-07!29;UBERON:0002405!4.16e-07!70;UBERON:0007023!6.57e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-10,16;UBERON:0001155,7.56e-10,2;UBERON:0000059,7.56e-10,2;UBERON:0001474,6.36e-08,22;UBERON:0004765,6.36e-08,22;UBERON:0001434,6.36e-08,22;UBERON:0002384,9.87e-07,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,1.57731082679119,2.33094537129756,0.84877930359606,0,0,0,0.47997726838022,0.22940928106717,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,1.27728527604296,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0.512612642393558,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0,0.389762468933385,0.358053391334963,0,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,1.57731082679119,2.33094537129756,0.84877930359606,0,0,0,0.47997726838022,0.22940928106717,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,1.27728527604296,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0.512612642393558,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0,0.389762468933385,0.358053391334963,0,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@H2-Ab1 | |short_description=p13@H2-Ab1 | ||
}} | }} |
Latest revision as of 07:53, 26 September 2015
Short description: | p13@H2-Ab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_H2-Ab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | -295bp_to_ENSMUST00000174875_5end |
EntrezGene: | H2-Ab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.15e-19 | 1 |
B cell | 5.15e-19 | 1 |
pro-B cell | 5.15e-19 | 1 |
myeloid lineage restricted progenitor cell | 7.26e-13 | 13 |
megakaryocyte progenitor cell | 1.08e-12 | 6 |
megakaryocyte | 1.08e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 7.02e-12 | 25 |
myeloid cell | 1.31e-10 | 16 |
bone marrow macrophage | 6.19e-10 | 2 |
hematopoietic cell | 2.00e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.00e-09 | 32 |
hematopoietic stem cell | 2.00e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.00e-09 | 32 |
common myeloid progenitor | 4.68e-09 | 19 |
megakaryocyte-erythroid progenitor cell | 8.40e-09 | 9 |
connective tissue cell | 9.87e-07 | 46 |
mesenchymal cell | 9.87e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.31e-10 | 16 |
colon | 7.56e-10 | 2 |
large intestine | 7.56e-10 | 2 |
bone element | 6.36e-08 | 22 |
skeletal element | 6.36e-08 | 22 |
skeletal system | 6.36e-08 | 22 |
connective tissue | 9.87e-07 | 46 |