FFCP PHASE1:Mm9::chr2:31859846..31859894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:31859846..31859894,+ | |||
|description=CAGE_peak_at_chr2:31859846..31859894,+ | |description=CAGE_peak_at_chr2:31859846..31859894,+ | ||
|id=chr2:31859846..31859894,+ | |id=chr2:31859846..31859894,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.47e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.83e-07!75;UBERON:0001016!3.83e-07!75;UBERON:0001017!5.05e-07!73;UBERON:0005743!5.05e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,5.29e-20,6;UBERON:0004732,5.29e-20,6;UBERON:0002028,5.29e-20,6;UBERON:0007277,5.29e-20,6;UBERON:0001896,2.90e-16,2;UBERON:0002298,2.90e-16,2;UBERON:0005290,2.90e-16,2;UBERON:0010096,2.90e-16,2;UBERON:0003076,1.95e-15,12;UBERON:0003057,1.95e-15,12;UBERON:0004684,2.47e-10,3;UBERON:0002275,2.47e-10,3;UBERON:0002259,1.74e-08,1;UBERON:0002314,1.74e-08,1;UBERON:0004061,1.74e-08,1;UBERON:0006777,1.74e-08,1;UBERON:0005882,1.74e-08,1;UBERON:0002037,4.40e-08,4;UBERON:0002680,4.40e-08,4;UBERON:0001895,4.40e-08,4;UBERON:0010092,4.40e-08,4;UBERON:0006215,4.40e-08,4;UBERON:0000073,4.99e-08,54;UBERON:0001017,2.45e-07,73;UBERON:0001016,4.06e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0.159544317990673,0,0.0874204024189974,0.333109761815663,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,15.8481681015439,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.0214987046815,0.921639199537461,0.263772575460388,0,0,0,0,0.763991238884051,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0.376999773989026,0,0,0,0,0.220841518460394,0,0,1.46390398505774,1.04723353406728,0.510914110417183,0.11981512450592,0,0,1.19832511523858,0.915001205637253,0.251308704225729,0.521472960576829,0,2.49345653471472,0.811206315338788,0,0.124406970610093,0,0,0.260240885925407,0,0,0,0.204109497453984,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0,0.473489471170421,0.393528463494808,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0.585400943573396,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,3.01582567878545,0,0,0,6.26147300952389,3.16471553798949,0,0,0.631016438832513,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0,0,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.41052892613663,0.341741761595705,0.412773735926445,0.555583582109135,0.941842285023455,0.136694227721025,0.228778173206523,0.169978429993855,0,0,1.90934123603023,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0.258319646955462,0,0.234714477291508,0.2604087696879,0.419437377702843,0.241584120826006,0,0,0,0.102710957164827,0.25984164595559,0.358053391334963,0,0.480781798079875,0,0,0.15241361331,0.201652370273681,0.38983152295901,0,0.116876902181569,0,0.221985953374065,0.269141569828427,0.335769232728157,0,0,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.187283014939765,0,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0.365855945745545,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0.159544317990673,0,0.0874204024189974,0.333109761815663,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,15.8481681015439,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.0214987046815,0.921639199537461,0.263772575460388,0,0,0,0,0.763991238884051,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0.376999773989026,0,0,0,0,0.220841518460394,0,0,1.46390398505774,1.04723353406728,0.510914110417183,0.11981512450592,0,0,1.19832511523858,0.915001205637253,0.251308704225729,0.521472960576829,0,2.49345653471472,0.811206315338788,0,0.124406970610093,0,0,0.260240885925407,0,0,0,0.204109497453984,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0,0.473489471170421,0.393528463494808,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0.585400943573396,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,3.01582567878545,0,0,0,6.26147300952389,3.16471553798949,0,0,0.631016438832513,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0,0,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.41052892613663,0.341741761595705,0.412773735926445,0.555583582109135,0.941842285023455,0.136694227721025,0.228778173206523,0.169978429993855,0,0,1.90934123603023,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0.258319646955462,0,0.234714477291508,0.2604087696879,0.419437377702843,0.241584120826006,0,0,0,0.102710957164827,0.25984164595559,0.358053391334963,0,0.480781798079875,0,0,0.15241361331,0.201652370273681,0.38983152295901,0,0.116876902181569,0,0.221985953374065,0.269141569828427,0.335769232728157,0,0,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.187283014939765,0,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0.365855945745545,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr2:31859846..31859894,+ | |short_description=p@chr2:31859846..31859894,+ | ||
}} | }} |
Latest revision as of 00:55, 5 August 2015
Short description: | p@chr2:31859846..31859894, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:31859846..31859894, + |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.47e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 5.29e-20 | 6 |
segmental subdivision of nervous system | 5.29e-20 | 6 |
hindbrain | 5.29e-20 | 6 |
presumptive hindbrain | 5.29e-20 | 6 |
medulla oblongata | 2.90e-16 | 2 |
brainstem | 2.90e-16 | 2 |
myelencephalon | 2.90e-16 | 2 |
future myelencephalon | 2.90e-16 | 2 |
posterior neural tube | 1.95e-15 | 12 |
chordal neural plate | 1.95e-15 | 12 |
raphe nuclei | 2.47e-10 | 3 |
reticular formation | 2.47e-10 | 3 |
corpora quadrigemina | 1.74e-08 | 1 |
midbrain tectum | 1.74e-08 | 1 |
neural tube mantle layer | 1.74e-08 | 1 |
tectal plate | 1.74e-08 | 1 |
neural tube alar plate | 1.74e-08 | 1 |
cerebellum | 4.40e-08 | 4 |
regional part of metencephalon | 4.40e-08 | 4 |
metencephalon | 4.40e-08 | 4 |
future metencephalon | 4.40e-08 | 4 |
rhombic lip | 4.40e-08 | 4 |
regional part of nervous system | 4.99e-08 | 54 |
central nervous system | 2.45e-07 | 73 |
nervous system | 4.06e-07 | 75 |