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FFCP PHASE1:Mm9::chr19:36422775..36422803,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76073
|EntrezGene=76073
|HGNC=
|HGNC=
|MCL_coexpression_id=374
|TSSclassifier=NA
|UniProt=Q3UK78
|UniProt=Q3UK78
|association_with_transcript=-140bp_to_uc008hhi.1,uc012bkz.1_5end
|association_with_transcript=-140bp_to_uc008hhi.1,uc012bkz.1_5end
|cluster_id=chr19:36422775..36422803,+
|description=CAGE_peak_5_at_Pcgf5_5end
|description=CAGE_peak_5_at_Pcgf5_5end
|id=chr19:36422775..36422803,+
|id=chr19:36422775..36422803,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,6.69e-07,9;CL:0000789,6.69e-07,9;CL:0002420,6.69e-07,9;CL:0002419,6.69e-07,9;CL:0000790,6.69e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0006562!2.45e-09!24;UBERON:0001557!2.45e-09!24;UBERON:0001042!2.45e-09!24;UBERON:0008814!2.45e-09!24;UBERON:0009145!2.45e-09!24;UBERON:0003081!4.92e-09!88;UBERON:0003408!5.25e-09!24;UBERON:0002370!7.10e-09!23;UBERON:0000974!7.10e-09!23;UBERON:0004807!7.10e-09!23;UBERON:0005058!7.10e-09!23;UBERON:0003351!7.10e-09!23;UBERON:0009113!7.10e-09!23;UBERON:0003295!7.10e-09!23;UBERON:0009722!7.10e-09!23;UBERON:0005562!7.10e-09!23;UBERON:0007690!7.10e-09!23;UBERON:0000072!2.62e-07!27;UBERON:0004177!7.35e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.26e-13,24;UBERON:0001557,2.26e-13,24;UBERON:0001042,2.26e-13,24;UBERON:0008814,2.26e-13,24;UBERON:0009145,2.26e-13,24;UBERON:0003408,6.79e-13,24;UBERON:0002370,1.01e-12,23;UBERON:0000974,1.01e-12,23;UBERON:0004807,1.01e-12,23;UBERON:0005058,1.01e-12,23;UBERON:0003351,1.01e-12,23;UBERON:0009113,1.01e-12,23;UBERON:0003295,1.01e-12,23;UBERON:0009722,1.01e-12,23;UBERON:0005562,1.01e-12,23;UBERON:0007690,1.01e-12,23;UBERON:0007811,3.65e-12,36;UBERON:0003081,1.02e-11,87;UBERON:0000072,6.09e-11,27;UBERON:0004177,1.92e-09,29;UBERON:0005057,1.92e-09,29;UBERON:0000077,5.91e-09,35;UBERON:0000153,1.47e-08,43;UBERON:0003929,3.52e-08,55;UBERON:0000490,4.44e-08,66;UBERON:0002390,1.35e-07,45;UBERON:0003061,1.35e-07,45;UBERON:0004535,2.34e-07,23;UBERON:0001009,2.34e-07,23;UBERON:0002193,2.99e-07,48;UBERON:0002405,2.99e-07,48
|phase1_expression=0.80074423552397,4.18770489167233,3.63999391511629,3.32710632437513,4.50806156951712,0.503637815735669,0.700837921786577,1.29123323441576,4.22366166455,3.04283884218592,2.73948749160808,1.7549874978974,1.88320802924326,2.88487327982691,0.333109761815663,0,0,0.946386496074713,0.411343300817216,0.42438965179803,1.61582251287033,0.794327609607082,1.04479915655574,0.799962113967033,0.45881856213434,2.8711598205751,1.7230479846363,0.646413698057667,0.950117097281869,0.252030129759931,1.99557459589774,0,0,0,0.866554859253824,0.831173226792462,1.22501613757421,0,0.7813353445238,1.0470474879476,0,0.683045484958446,0.485510353031154,4.28049181116963,3.24406179902447,2.38610777810186,1.56478268869608,0.65407546914134,0.219686182734472,0.972149495371417,0.979904951377538,0,0.335565212115473,3.62681071005672,3.6970317905671,0.771778308107841,0,1.03134418455488,0.606949382578793,1.05798195854407,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,1.92109152660777,0.414758449233911,0.810035629990144,0.210324961351382,0,0,0,0.479227355091182,0,2.20231761998777,0.766124028511126,1.38245879930619,0.131886287730194,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,1.06958773443767,0,0.427115042397309,0.186399445825301,0.227178579999552,0.226714680320357,1.15945795480671,0.860423876981386,6.11974200336975,0,1.29955283489534,1.79210754838934,0.842666520790511,1.36344258062446,2.33807404142582,2.47337702157238,0.845060518660083,3.84979432242953,2.54805239706646,0,0.216491041011214,0,0.505524445014783,1.82694207550496,1.8125651855302,1.92974780784272,0.173485326766136,0.304465478312141,0.691846491768175,0,1.05829836422134,1.13099932196708,6.92145909656247,1.3013942122792,1.76922110389975,0.323533699894818,1.54589062922275,0.969750506270444,0,0.292780797011547,0.628340120440365,0.766371165625774,7.18890747035522,7.7987355029143,6.4805815807263,0.898743836428936,0.915001205637253,0.376963056338593,0.521472960576829,1.53429274398198,1.24672826735736,0.973447578406546,0.305518091550949,0.746441823660558,0.505445516867349,0.420883711772948,0.910843100738926,1.37941262660084,0.720248519221397,1.05493372485001,2.4493139694478,1.66547836370305,2.24884138943349,1.55222022443409,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,3.86021860672073,5.11494298912067,1.03562886267751,0.703578179943289,0.900310307305074,1.42046841351126,1.18058539048442,1.69693824176116,2.79040733700489,2.95100741539581,3.15266424391358,2.63295759861569,1.64167464079095,2.35099547682982,2.77779976108131,1.97595103761946,2.81833479396781,0.841159794256509,0.617427674275707,2.31293148088659,1.32225283331772,0,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0.190225626112559,0.949058123089023,0.823494773620054,0.502670417600539,0.596869416123452,0.58489226135736,0,0.864552199498777,0.597423819763102,0,0,0,0,0.193952487167626,0.631222379012867,0.126473074248515,0.738050739898011,1.41298855057237,1.85095745882701,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,1.45921704097532,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,1.01031551178845,1.4351793081753,0.482443521363367,2.03228509183265,0,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0,1.36593553500459,0.315270288212382,0.664394068946325,0,0.491589944147214,1.03610989119537,0.723245292907558,1.50791283939272,2.17562273527484,1.47529281905711,0.275936746304732,1.12385412991454,0.586058432961016,2.29508923527346,1.26235463602186,1.26203287766503,1.17131623288992,2.36965737506079,0.955875191810208,0.891194696329576,1.41538265394416,0.404810701674894,0.292255857911312,1.97643888973262,0,0.283880170416537,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,0.242780636154981,0,0.377210159511796,0,0,1.55056975900933,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,2.38307724027652,0.540183282093931,0.388076051348264,1.07168517515796,1.06404140185364,0,0.329098041204242,0.304464949114599,0.704015124191131,1.90648863777438,0.661585194164886,0.8244312647074,0.968786560175433,0.180938774784468,0.358117032009409,0.492422699235184,0.291480836629851,0.927126510052548,1.70870880797853,0.619160603889667,0.925972636848558,0.188368457004691,0,0.457556346413045,12.2384469595576,10.7762618289217,11.3323978519628,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.809186078308924,0.578574190077352,0.523511883968059,0.648074866458964,1.24267862617385,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0.5208175393758,0.943734099831398,0,0.288030006257865,4.10814456816632,0.202725215290164,1.02710957164827,1.29920822977795,2.32734704367726,2.18549490259391,3.60586348559907,3.10148007066612,2.3222283488074,3.27689268616499,3.93222122033678,2.92373642219257,4.13710919053417,4.44132228289962,2.494034219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|phase1_expression=0.80074423552397,4.18770489167233,3.63999391511629,3.32710632437513,4.50806156951712,0.503637815735669,0.700837921786577,1.29123323441576,4.22366166455,3.04283884218592,2.73948749160808,1.7549874978974,1.88320802924326,2.88487327982691,0.333109761815663,0,0,0.946386496074713,0.411343300817216,0.42438965179803,1.61582251287033,0.794327609607082,1.04479915655574,0.799962113967033,0.45881856213434,2.8711598205751,1.7230479846363,0.646413698057667,0.950117097281869,0.252030129759931,1.99557459589774,0,0,0,0.866554859253824,0.831173226792462,1.22501613757421,0,0.7813353445238,1.0470474879476,0,0.683045484958446,0.485510353031154,4.28049181116963,3.24406179902447,2.38610777810186,1.56478268869608,0.65407546914134,0.219686182734472,0.972149495371417,0.979904951377538,0,0.335565212115473,3.62681071005672,3.6970317905671,0.771778308107841,0,1.03134418455488,0.606949382578793,1.05798195854407,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,1.92109152660777,0.414758449233911,0.810035629990144,0.210324961351382,0,0,0,0.479227355091182,0,2.20231761998777,0.766124028511126,1.38245879930619,0.131886287730194,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,1.06958773443767,0,0.427115042397309,0.186399445825301,0.227178579999552,0.226714680320357,1.15945795480671,0.860423876981386,6.11974200336975,0,1.29955283489534,1.79210754838934,0.842666520790511,1.36344258062446,2.33807404142582,2.47337702157238,0.845060518660083,3.84979432242953,2.54805239706646,0,0.216491041011214,0,0.505524445014783,1.82694207550496,1.8125651855302,1.92974780784272,0.173485326766136,0.304465478312141,0.691846491768175,0,1.05829836422134,1.13099932196708,6.92145909656247,1.3013942122792,1.76922110389975,0.323533699894818,1.54589062922275,0.969750506270444,0,0.292780797011547,0.628340120440365,0.766371165625774,7.18890747035522,7.7987355029143,6.4805815807263,0.898743836428936,0.915001205637253,0.376963056338593,0.521472960576829,1.53429274398198,1.24672826735736,0.973447578406546,0.305518091550949,0.746441823660558,0.505445516867349,0.420883711772948,0.910843100738926,1.37941262660084,0.720248519221397,1.05493372485001,2.4493139694478,1.66547836370305,2.24884138943349,1.55222022443409,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,3.86021860672073,5.11494298912067,1.03562886267751,0.703578179943289,0.900310307305074,1.42046841351126,1.18058539048442,1.69693824176116,2.79040733700489,2.95100741539581,3.15266424391358,2.63295759861569,1.64167464079095,2.35099547682982,2.77779976108131,1.97595103761946,2.81833479396781,0.841159794256509,0.617427674275707,2.31293148088659,1.32225283331772,0,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0.190225626112559,0.949058123089023,0.823494773620054,0.502670417600539,0.596869416123452,0.58489226135736,0,0.864552199498777,0.597423819763102,0,0,0,0,0.193952487167626,0.631222379012867,0.126473074248515,0.738050739898011,1.41298855057237,1.85095745882701,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,1.45921704097532,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,1.01031551178845,1.4351793081753,0.482443521363367,2.03228509183265,0,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0,1.36593553500459,0.315270288212382,0.664394068946325,0,0.491589944147214,1.03610989119537,0.723245292907558,1.50791283939272,2.17562273527484,1.47529281905711,0.275936746304732,1.12385412991454,0.586058432961016,2.29508923527346,1.26235463602186,1.26203287766503,1.17131623288992,2.36965737506079,0.955875191810208,0.891194696329576,1.41538265394416,0.404810701674894,0.292255857911312,1.97643888973262,0,0.283880170416537,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,0.242780636154981,0,0.377210159511796,0,0,1.55056975900933,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,2.38307724027652,0.540183282093931,0.388076051348264,1.07168517515796,1.06404140185364,0,0.329098041204242,0.304464949114599,0.704015124191131,1.90648863777438,0.661585194164886,0.8244312647074,0.968786560175433,0.180938774784468,0.358117032009409,0.492422699235184,0.291480836629851,0.927126510052548,1.70870880797853,0.619160603889667,0.925972636848558,0.188368457004691,0,0.457556346413045,12.2384469595576,10.7762618289217,11.3323978519628,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.809186078308924,0.578574190077352,0.523511883968059,0.648074866458964,1.24267862617385,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0.5208175393758,0.943734099831398,0,0.288030006257865,4.10814456816632,0.202725215290164,1.02710957164827,1.29920822977795,2.32734704367726,2.18549490259391,3.60586348559907,3.10148007066612,2.3222283488074,3.27689268616499,3.93222122033678,2.92373642219257,4.13710919053417,4.44132228289962,2.494034219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|short_description=p5@Pcgf5
|short_description=p5@Pcgf5
}}
}}

Latest revision as of 16:22, 25 September 2015

Short description:p5@Pcgf5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Pcgf5_5end
Coexpression cluster:MCL_coexpression_mm9:374
Association with transcript: -140bp_to_uc008hhi.1, uc012bkz.1_5end
EntrezGene:Pcgf5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Pcgf5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.48
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.33
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell6.69e-079
alpha-beta T cell6.69e-079
immature T cell6.69e-079
mature T cell6.69e-079
immature alpha-beta T cell6.69e-079

Uber anatomy
Ontology termp-valuen
pharynx2.26e-1324
upper respiratory tract2.26e-1324
chordate pharynx2.26e-1324
pharyngeal arch system2.26e-1324
pharyngeal region of foregut2.26e-1324
gland of gut6.79e-1324
thymus1.01e-1223
neck1.01e-1223
respiratory system epithelium1.01e-1223
hemolymphoid system gland1.01e-1223
pharyngeal epithelium1.01e-1223
thymic region1.01e-1223
pharyngeal gland1.01e-1223
entire pharyngeal arch endoderm1.01e-1223
thymus primordium1.01e-1223
early pharyngeal endoderm1.01e-1223
craniocervical region3.65e-1236
lateral plate mesoderm1.02e-1187
segment of respiratory tract6.09e-1127
hemopoietic organ1.92e-0929
immune organ1.92e-0929
mixed endoderm/mesoderm-derived structure5.91e-0935
anterior region of body1.47e-0843
gut epithelium3.52e-0855
unilaminar epithelium4.44e-0866
hematopoietic system1.35e-0745
blood island1.35e-0745
cardiovascular system2.34e-0723
circulatory system2.34e-0723
hemolymphoid system2.99e-0748
immune system2.99e-0748
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