FFCP PHASE1:Mm9::chr10:116482402..116482419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237560 | |EntrezGene=237560 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3W2,Q3UQT4 | |UniProt=Q8K3W2,Q3UQT4 | ||
|association_with_transcript=5bp_to_ENSMUST00000073834,NM_146242,uc007hcr.1_5end | |association_with_transcript=5bp_to_ENSMUST00000073834,NM_146242,uc007hcr.1_5end | ||
|cluster_id=chr10:116482402..116482419,+ | |||
|description=CAGE_peak_1_at_Lrrc10_5end | |description=CAGE_peak_1_at_Lrrc10_5end | ||
|id=chr10:116482402..116482419,+ | |id=chr10:116482402..116482419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.12e-22!18;UBERON:0000948!1.12e-22!18;UBERON:0005498!1.12e-22!18;UBERON:0004140!1.12e-22!18;UBERON:0009881!1.12e-22!18;UBERON:0004141!1.12e-22!18;UBERON:0003084!1.12e-22!18;UBERON:0007005!1.12e-22!18;UBERON:0004139!1.12e-22!18;UBERON:0004291!1.12e-22!18;UBERON:0004535!7.03e-18!23;UBERON:0001009!7.03e-18!23;UBERON:0002048!3.82e-13!14;UBERON:0000117!3.82e-13!14;UBERON:0000171!3.82e-13!14;UBERON:0000170!3.82e-13!14;UBERON:0005597!3.82e-13!14;UBERON:0000118!3.82e-13!14;UBERON:0004872!1.77e-10!33;UBERON:0005153!4.09e-10!17;UBERON:0005178!4.09e-10!17;UBERON:0005181!4.09e-10!17;UBERON:0002224!4.09e-10!17;UBERON:0000915!4.09e-10!17;UBERON:0008947!4.09e-10!17;UBERON:0003258!4.09e-10!17;UBERON:0003914!2.11e-07!47;UBERON:0000310!5.98e-07!6;UBERON:0001443!5.98e-07!6;UBERON:0003103!6.61e-07!43 | |ontology_enrichment_uberon=UBERON:0007100!1.12e-22!18;UBERON:0000948!1.12e-22!18;UBERON:0005498!1.12e-22!18;UBERON:0004140!1.12e-22!18;UBERON:0009881!1.12e-22!18;UBERON:0004141!1.12e-22!18;UBERON:0003084!1.12e-22!18;UBERON:0007005!1.12e-22!18;UBERON:0004139!1.12e-22!18;UBERON:0004291!1.12e-22!18;UBERON:0004535!7.03e-18!23;UBERON:0001009!7.03e-18!23;UBERON:0002048!3.82e-13!14;UBERON:0000117!3.82e-13!14;UBERON:0000171!3.82e-13!14;UBERON:0000170!3.82e-13!14;UBERON:0005597!3.82e-13!14;UBERON:0000118!3.82e-13!14;UBERON:0004872!1.77e-10!33;UBERON:0005153!4.09e-10!17;UBERON:0005178!4.09e-10!17;UBERON:0005181!4.09e-10!17;UBERON:0002224!4.09e-10!17;UBERON:0000915!4.09e-10!17;UBERON:0008947!4.09e-10!17;UBERON:0003258!4.09e-10!17;UBERON:0003914!2.11e-07!47;UBERON:0000310!5.98e-07!6;UBERON:0001443!5.98e-07!6;UBERON:0003103!6.61e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.30e-25,18;UBERON:0000948,5.30e-25,18;UBERON:0005498,5.30e-25,18;UBERON:0004140,5.30e-25,18;UBERON:0009881,5.30e-25,18;UBERON:0004141,5.30e-25,18;UBERON:0003084,5.30e-25,18;UBERON:0007005,5.30e-25,18;UBERON:0004139,5.30e-25,18;UBERON:0004291,5.30e-25,18;UBERON:0004535,2.43e-18,23;UBERON:0001009,2.43e-18,23;UBERON:0002048,5.52e-12,14;UBERON:0000117,5.52e-12,14;UBERON:0000171,5.52e-12,14;UBERON:0000170,5.52e-12,14;UBERON:0005597,5.52e-12,14;UBERON:0000118,5.52e-12,14;UBERON:0004872,3.74e-11,33;UBERON:0005153,2.39e-09,17;UBERON:0005178,2.39e-09,17;UBERON:0005181,2.39e-09,17;UBERON:0002224,2.39e-09,17;UBERON:0000915,2.39e-09,17;UBERON:0008947,2.39e-09,17;UBERON:0003258,2.39e-09,17;UBERON:0003103,1.74e-08,43;UBERON:0003914,2.24e-08,47;UBERON:0005157,1.61e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,4.01146815914259,16.5015069528782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.319312008986,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.219892448035,121.719025130189,113.799222843361,122.870517768724,171.971938547231,119.094211149056,159.75082004353,167.134329071963,471.731983163365,186.28175010206,187.807578906485,443.608525834923,404.535365205894,245.896129125977,338.065968857376,0.210289948564127,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25842124552503,0,0,0,0,0,0,0,3.17005700860579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,5.68474235311454,2.93336957595647,2.20668611507745,0.234690248288502,4.52266895092903,1.90434912708811,2.73187107000918,1.41871629695572,0.8858587585951,1.43509291791738,1.14704320301017,1.20879487306127,2.74833211304872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.77952493786677,0,1.19208812868759,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07574695168353,1.99512436700516,1.36586884603307,0.729320151204882,1.04806581313991,1.10306105070008,1.77797382241292,1.23621034343337,0.64183841918363,1.51618327058278,2.5347929989024,1.88626341386076,1.68554713445788,1.47257850531199,1.32101578597911,0.952587382566147,1.73826488917283,0.578727661391115,2.47251540481984,1.03039244094078,1.37147700954166,1.24233064311536,0.953744759789284,2.90692833264657,1.69396884747595,1.77690676572521,1.28049581010941,1.05227884575137,1.7654534799962,2.24456908663095,1.42362021749009,1.37906275325789,1.63692417267876,2.78886314134739,1.35034627686799,0,0.701794825336225,2.57845264857958,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,4.01146815914259,16.5015069528782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.319312008986,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.219892448035,121.719025130189,113.799222843361,122.870517768724,171.971938547231,119.094211149056,159.75082004353,167.134329071963,471.731983163365,186.28175010206,187.807578906485,443.608525834923,404.535365205894,245.896129125977,338.065968857376,0.210289948564127,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25842124552503,0,0,0,0,0,0,0,3.17005700860579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,5.68474235311454,2.93336957595647,2.20668611507745,0.234690248288502,4.52266895092903,1.90434912708811,2.73187107000918,1.41871629695572,0.8858587585951,1.43509291791738,1.14704320301017,1.20879487306127,2.74833211304872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.77952493786677,0,1.19208812868759,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07574695168353,1.99512436700516,1.36586884603307,0.729320151204882,1.04806581313991,1.10306105070008,1.77797382241292,1.23621034343337,0.64183841918363,1.51618327058278,2.5347929989024,1.88626341386076,1.68554713445788,1.47257850531199,1.32101578597911,0.952587382566147,1.73826488917283,0.578727661391115,2.47251540481984,1.03039244094078,1.37147700954166,1.24233064311536,0.953744759789284,2.90692833264657,1.69396884747595,1.77690676572521,1.28049581010941,1.05227884575137,1.7654534799962,2.24456908663095,1.42362021749009,1.37906275325789,1.63692417267876,2.78886314134739,1.35034627686799,0,0.701794825336225,2.57845264857958,0,0,0 | ||
|short_description=p1@Lrrc10 | |short_description=p1@Lrrc10 | ||
}} | }} |
Latest revision as of 15:25, 25 September 2015
Short description: | p1@Lrrc10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc10_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 5bp_to_ENSMUST00000073834, NM_146242, uc007hcr.1_5end |
EntrezGene: | Lrrc10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.30e-25 | 18 |
heart | 5.30e-25 | 18 |
primitive heart tube | 5.30e-25 | 18 |
primary heart field | 5.30e-25 | 18 |
anterior lateral plate mesoderm | 5.30e-25 | 18 |
heart tube | 5.30e-25 | 18 |
heart primordium | 5.30e-25 | 18 |
cardiac mesoderm | 5.30e-25 | 18 |
cardiogenic plate | 5.30e-25 | 18 |
heart rudiment | 5.30e-25 | 18 |
cardiovascular system | 2.43e-18 | 23 |
circulatory system | 2.43e-18 | 23 |
lung | 5.52e-12 | 14 |
respiratory tube | 5.52e-12 | 14 |
respiration organ | 5.52e-12 | 14 |
pair of lungs | 5.52e-12 | 14 |
lung primordium | 5.52e-12 | 14 |
lung bud | 5.52e-12 | 14 |
splanchnic layer of lateral plate mesoderm | 3.74e-11 | 33 |
epithelial bud | 2.39e-09 | 17 |
thoracic cavity element | 2.39e-09 | 17 |
thoracic segment organ | 2.39e-09 | 17 |
thoracic cavity | 2.39e-09 | 17 |
thoracic segment of trunk | 2.39e-09 | 17 |
respiratory primordium | 2.39e-09 | 17 |
endoderm of foregut | 2.39e-09 | 17 |
compound organ | 1.74e-08 | 43 |
epithelial tube | 2.24e-08 | 47 |
epithelial fold | 1.61e-07 | 20 |