FFCP PHASE1:Mm9::chr1:165993128..165993139,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=553 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:165993128..165993139,- | |||
|description=CAGE_peak_at_chr1:165993128..165993139,- | |description=CAGE_peak_at_chr1:165993128..165993139,- | ||
|id=chr1:165993128..165993139,- | |id=chr1:165993128..165993139,- | ||
|ontology_enrichment_celltype=CL:0002031!4.29e-11!25;CL:0000791!3.49e-10!9;CL:0000789!3.49e-10!9;CL:0002420!3.49e-10!9;CL:0002419!3.49e-10!9;CL:0000790!3.49e-10!9;CL:0000838!1.31e-09!12;CL:0000988!2.93e-09!32;CL:0002032!2.93e-09!32;CL:0000037!2.93e-09!32;CL:0000566!2.93e-09!32;CL:0000837!2.93e-09!32;CL:0000553!7.57e-09!6;CL:0000556!7.57e-09!6;CL:0000542!9.57e-09!13;CL:0000051!9.57e-09!13;CL:0000624!1.31e-08!8;CL:0000084!4.19e-08!11;CL:0000827!4.19e-08!11 | |ontology_enrichment_celltype=CL:0002031!4.29e-11!25;CL:0000791!3.49e-10!9;CL:0000789!3.49e-10!9;CL:0002420!3.49e-10!9;CL:0002419!3.49e-10!9;CL:0000790!3.49e-10!9;CL:0000838!1.31e-09!12;CL:0000988!2.93e-09!32;CL:0002032!2.93e-09!32;CL:0000037!2.93e-09!32;CL:0000566!2.93e-09!32;CL:0000837!2.93e-09!32;CL:0000553!7.57e-09!6;CL:0000556!7.57e-09!6;CL:0000542!9.57e-09!13;CL:0000051!9.57e-09!13;CL:0000624!1.31e-08!8;CL:0000084!4.19e-08!11;CL:0000827!4.19e-08!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.80e-12,25;CL:0000553,2.68e-10,6;CL:0000556,2.68e-10,6;CL:0000988,2.76e-09,32;CL:0002032,2.76e-09,32;CL:0000037,2.76e-09,32;CL:0000837,2.76e-09,32;CL:0000838,9.06e-09,12;CL:0000542,4.14e-08,13;CL:0000051,4.14e-08,13;CL:0000815,4.65e-08,1;CL:0000792,4.65e-08,1;CL:0000624,6.73e-08,8;CL:0000945,2.74e-07,1;CL:0000236,2.74e-07,1;CL:0000826,2.74e-07,1;CL:0000791,4.50e-07,9;CL:0000789,4.50e-07,9;CL:0002420,4.50e-07,9;CL:0002419,4.50e-07,9;CL:0000790,4.50e-07,9;CL:0000050,4.94e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.13e-14!48;UBERON:0002390!1.71e-13!45;UBERON:0003061!1.71e-13!45;UBERON:0004177!1.93e-12!29;UBERON:0000065!3.42e-11!41;UBERON:0001004!8.14e-11!42;UBERON:0002405!1.10e-09!70;UBERON:0002370!1.03e-08!23;UBERON:0000974!1.03e-08!23;UBERON:0004807!1.03e-08!23;UBERON:0005058!1.03e-08!23;UBERON:0003351!1.03e-08!23;UBERON:0009113!1.03e-08!23;UBERON:0003295!1.03e-08!23;UBERON:0009722!1.03e-08!23;UBERON:0005562!1.03e-08!23;UBERON:0007690!1.03e-08!23;UBERON:0006562!3.05e-08!24;UBERON:0003408!3.05e-08!24;UBERON:0001557!3.05e-08!24;UBERON:0001042!3.05e-08!24;UBERON:0008814!3.05e-08!24;UBERON:0009145!3.05e-08!24;UBERON:0005057!3.07e-07!51;UBERON:0000072!4.83e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.41e-08,1;UBERON:0001097,5.41e-08,1;UBERON:0003968,5.41e-08,1;UBERON:0001467,5.41e-08,1;UBERON:0002193,9.17e-08,48;UBERON:0002405,9.17e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,5.29405626110463,0.563154888606667,0,0,0.0797721589953364,2.73921167889929,2.36035086531293,0.999329285446988,0.607425802169478,0,3.47008381894061,4.11343300817216,1.69755860719212,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,2.94115744015507,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0.512612642393558,0,0,0.188368457004691,1.36694227721025,1.60144721244566,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.51968329191118,0.358053391334963,0,0,0,0.302899349844443,0.228620419965,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,5.29405626110463,0.563154888606667,0,0,0.0797721589953364,2.73921167889929,2.36035086531293,0.999329285446988,0.607425802169478,0,3.47008381894061,4.11343300817216,1.69755860719212,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,2.94115744015507,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0.512612642393558,0,0,0.188368457004691,1.36694227721025,1.60144721244566,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.51968329191118,0.358053391334963,0,0,0,0.302899349844443,0.228620419965,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:165993128..165993139,- | |short_description=p@chr1:165993128..165993139,- | ||
}} | }} |
Latest revision as of 03:42, 5 August 2015
Short description: | p@chr1:165993128..165993139, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:165993128..165993139, - |
Coexpression cluster: | MCL_coexpression_mm9:553 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.80e-12 | 25 |
megakaryocyte progenitor cell | 2.68e-10 | 6 |
megakaryocyte | 2.68e-10 | 6 |
hematopoietic cell | 2.76e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.76e-09 | 32 |
hematopoietic stem cell | 2.76e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.76e-09 | 32 |
lymphoid lineage restricted progenitor cell | 9.06e-09 | 12 |
lymphocyte | 4.14e-08 | 13 |
common lymphoid progenitor | 4.14e-08 | 13 |
regulatory T cell | 4.65e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.65e-08 | 1 |
CD4-positive, alpha-beta T cell | 6.73e-08 | 8 |
lymphocyte of B lineage | 2.74e-07 | 1 |
B cell | 2.74e-07 | 1 |
pro-B cell | 2.74e-07 | 1 |
mature alpha-beta T cell | 4.50e-07 | 9 |
alpha-beta T cell | 4.50e-07 | 9 |
immature T cell | 4.50e-07 | 9 |
mature T cell | 4.50e-07 | 9 |
immature alpha-beta T cell | 4.50e-07 | 9 |
megakaryocyte-erythroid progenitor cell | 4.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.41e-08 | 1 |
axillary lymph node | 5.41e-08 | 1 |
peripheral lymph node | 5.41e-08 | 1 |
shoulder | 5.41e-08 | 1 |
hemolymphoid system | 9.17e-08 | 48 |
immune system | 9.17e-08 | 48 |