FFCP PHASE1:Mm9::chr1:174430288..174430293,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=366 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174430288..174430293,- | |||
|description=CAGE_peak_at_chr1:174430288..174430293,- | |description=CAGE_peak_at_chr1:174430288..174430293,- | ||
|id=chr1:174430288..174430293,- | |id=chr1:174430288..174430293,- | ||
|ontology_enrichment_celltype=CL:0002563!1.50e-11!9;CL:0002251!1.50e-11!9;CL:0002076!8.47e-09!15;CL:0000075!1.26e-08!7;CL:0000239!3.21e-08!6;CL:0000677!3.21e-08!6;CL:0000212!3.21e-08!6;CL:0000584!3.21e-08!6;CL:0000066!6.04e-08!25;CL:0000223!3.38e-07!20;CL:0000063!8.37e-07!66 | |ontology_enrichment_celltype=CL:0002563!1.50e-11!9;CL:0002251!1.50e-11!9;CL:0002076!8.47e-09!15;CL:0000075!1.26e-08!7;CL:0000239!3.21e-08!6;CL:0000677!3.21e-08!6;CL:0000212!3.21e-08!6;CL:0000584!3.21e-08!6;CL:0000066!6.04e-08!25;CL:0000223!3.38e-07!20;CL:0000063!8.37e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.71e-17,9;CL:0002251,1.71e-17,9;CL:0000764,2.70e-14,3;CL:0000765,2.70e-14,3;CL:0000038,2.70e-14,3;CL:0000547,2.70e-14,3;CL:0002250,4.93e-14,3;CL:0000223,2.46e-12,20;CL:0000213,1.83e-11,1;CL:0002078,1.83e-11,1;CL:0000115,1.83e-11,1;CL:0002262,1.83e-11,1;CL:1000398,1.83e-11,1;CL:0002076,1.15e-10,15;CL:0000066,6.72e-10,25;CL:0000239,2.94e-07,6;CL:0000677,2.94e-07,6;CL:0000584,2.94e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.70e-14,3;DOID:0060083,2.70e-14,3;DOID:1240,2.70e-14,3;DOID:0050686,1.30e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!1.89e-12!11;UBERON:0003350!1.50e-11!9;UBERON:0004808!1.50e-11!9;UBERON:0001277!1.50e-11!9;UBERON:0001242!3.58e-07!13;UBERON:0000060!3.58e-07!13;UBERON:0001262!3.58e-07!13;UBERON:0004786!3.58e-07!13;UBERON:0000344!5.14e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.71e-17,9;UBERON:0004808,1.71e-17,9;UBERON:0001277,1.71e-17,9;UBERON:0000485,2.14e-14,11;UBERON:0001242,3.01e-12,13;UBERON:0001262,3.01e-12,13;UBERON:0004786,3.01e-12,13;UBERON:0002394,1.83e-11,1;UBERON:0001281,1.83e-11,1;UBERON:0000353,1.83e-11,1;UBERON:0003497,1.83e-11,1;UBERON:0003909,1.83e-11,1;UBERON:0003928,1.83e-11,1;UBERON:0003835,1.83e-11,1;UBERON:0003513,1.83e-11,1;UBERON:0001280,1.83e-11,1;UBERON:0004647,1.83e-11,1;UBERON:0002294,1.83e-11,1;UBERON:0001173,1.83e-11,1;UBERON:0004912,1.83e-11,1;UBERON:0005171,1.83e-11,1;UBERON:0000344,1.15e-10,15;UBERON:0004923,8.67e-07,24 | |||
|phase1_expression=0.160148847104794,1.74487703819681,0.909998478779072,0.60492842261366,0.500895729946347,0.671517087647559,1.40167584357315,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,2.54012269383853,2.46025915033828,0,2.3108129580102,0.332469290716985,2.24586291888606,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0,0.304130793658544,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.50742528533188,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,1.54408744268829,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0.922305443831782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0.849892149969277,0.69975726161829,0,1.90934123603023,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.443971906748129,0.717710852875806,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,1.74487703819681,0.909998478779072,0.60492842261366,0.500895729946347,0.671517087647559,1.40167584357315,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,2.54012269383853,2.46025915033828,0,2.3108129580102,0.332469290716985,2.24586291888606,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0,0.304130793658544,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.50742528533188,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,1.54408744268829,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0.922305443831782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0.849892149969277,0.69975726161829,0,1.90934123603023,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.443971906748129,0.717710852875806,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:174430288..174430293,- | |short_description=p@chr1:174430288..174430293,- | ||
}} | }} |
Latest revision as of 07:44, 5 August 2015
Short description: | p@chr1:174430288..174430293, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174430288..174430293, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.71e-17 | 9 |
epithelial cell of alimentary canal | 1.71e-17 | 9 |
erythroid lineage cell | 2.70e-14 | 3 |
erythroblast | 2.70e-14 | 3 |
erythroid progenitor cell | 2.70e-14 | 3 |
proerythroblast | 2.70e-14 | 3 |
intestinal crypt stem cell | 4.93e-14 | 3 |
endodermal cell | 2.46e-12 | 20 |
lining cell | 1.83e-11 | 1 |
meso-epithelial cell | 1.83e-11 | 1 |
endothelial cell | 1.83e-11 | 1 |
endothelial cell of sinusoid | 1.83e-11 | 1 |
endothelial cell of hepatic sinusoid | 1.83e-11 | 1 |
endo-epithelial cell | 1.15e-10 | 15 |
epithelial cell | 6.72e-10 | 25 |
brush border epithelial cell | 2.94e-07 | 6 |
gut absorptive cell | 2.94e-07 | 6 |
enterocyte | 2.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.71e-17 | 9 |
gastrointestinal system epithelium | 1.71e-17 | 9 |
intestinal epithelium | 1.71e-17 | 9 |
simple columnar epithelium | 2.14e-14 | 11 |
intestinal mucosa | 3.01e-12 | 13 |
wall of intestine | 3.01e-12 | 13 |
gastrointestinal system mucosa | 3.01e-12 | 13 |
bile duct | 1.83e-11 | 1 |
hepatic sinusoid | 1.83e-11 | 1 |
parenchyma | 1.83e-11 | 1 |
abdomen blood vessel | 1.83e-11 | 1 |
sinusoid | 1.83e-11 | 1 |
digestive system duct | 1.83e-11 | 1 |
abdominal segment blood vessel | 1.83e-11 | 1 |
trunk blood vessel | 1.83e-11 | 1 |
liver parenchyma | 1.83e-11 | 1 |
liver lobule | 1.83e-11 | 1 |
biliary system | 1.83e-11 | 1 |
biliary tree | 1.83e-11 | 1 |
biliary bud | 1.83e-11 | 1 |
hepatic duct | 1.83e-11 | 1 |
mucosa | 1.15e-10 | 15 |
organ component layer | 8.67e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.70e-14 | 3 |
immune system cancer | 2.70e-14 | 3 |
leukemia | 2.70e-14 | 3 |
organ system cancer | 1.30e-07 | 6 |