Personal tools

FFCP PHASE1:Mm9::chr4:110256532..110256536,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=733
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:110256532..110256536,+
|description=CAGE_peak_at_chr4:110256532..110256536,+
|description=CAGE_peak_at_chr4:110256532..110256536,+
|id=chr4:110256532..110256536,+
|id=chr4:110256532..110256536,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!9.63e-20!63;UBERON:0003056!1.09e-19!49;UBERON:0002346!1.09e-18!71;UBERON:0003075!1.09e-18!71;UBERON:0007284!1.09e-18!71;UBERON:0001049!1.87e-16!52;UBERON:0005068!1.87e-16!52;UBERON:0006241!1.87e-16!52;UBERON:0007135!1.87e-16!52;UBERON:0000955!2.48e-16!50;UBERON:0006238!2.48e-16!50;UBERON:0002616!1.02e-15!49;UBERON:0003080!4.80e-15!40;UBERON:0002780!2.45e-14!39;UBERON:0001890!2.45e-14!39;UBERON:0006240!2.45e-14!39;UBERON:0000025!1.82e-12!114;UBERON:0002020!2.97e-11!34;UBERON:0002791!7.08e-11!29;UBERON:0003528!7.08e-11!29;UBERON:0001893!7.08e-11!29;UBERON:0004111!8.53e-11!122;UBERON:0001017!4.39e-10!73;UBERON:0005743!4.39e-10!73;UBERON:0004121!8.30e-10!102;UBERON:0000924!8.30e-10!102;UBERON:0006601!8.30e-10!102;UBERON:0007811!1.46e-09!86;UBERON:0000073!2.49e-09!75;UBERON:0001016!2.49e-09!75;UBERON:0002021!3.25e-09!10;UBERON:0000411!3.25e-09!10;UBERON:0001950!3.25e-09!10;UBERON:0000153!4.84e-09!94;UBERON:0000956!1.08e-07!21;UBERON:0001869!1.08e-07!21;UBERON:0000203!1.08e-07!21;UBERON:0002619!1.58e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.29e-23,49;UBERON:0000955,1.67e-22,47;UBERON:0006238,1.67e-22,47;UBERON:0002021,7.15e-22,10;UBERON:0000411,7.15e-22,10;UBERON:0001950,7.15e-22,10;UBERON:0002616,3.71e-21,46;UBERON:0002346,4.61e-21,64;UBERON:0003075,4.61e-21,64;UBERON:0007284,4.61e-21,64;UBERON:0003080,8.70e-21,40;UBERON:0001049,9.94e-20,52;UBERON:0005068,9.94e-20,52;UBERON:0006241,9.94e-20,52;UBERON:0007135,9.94e-20,52;UBERON:0002780,2.98e-19,39;UBERON:0001890,2.98e-19,39;UBERON:0006240,2.98e-19,39;UBERON:0000073,7.20e-19,54;UBERON:0010371,1.43e-17,73;UBERON:0003528,1.13e-15,29;UBERON:0002791,1.13e-15,29;UBERON:0001893,1.13e-15,29;UBERON:0001017,8.17e-15,73;UBERON:0002619,2.99e-14,17;UBERON:0001016,3.07e-14,75;UBERON:0004121,3.85e-14,95;UBERON:0000924,3.85e-14,95;UBERON:0006601,3.85e-14,95;UBERON:0010314,1.64e-13,92;UBERON:0000956,3.09e-13,21;UBERON:0001869,3.09e-13,21;UBERON:0000203,3.09e-13,21;UBERON:0002020,9.10e-13,34;UBERON:0002950,6.33e-08,4;UBERON:0001891,6.33e-08,4;UBERON:0009616,6.33e-08,4;UBERON:0010286,6.33e-08,4;UBERON:0000025,1.01e-07,114;UBERON:0007023,8.16e-07,51;UBERON:0004111,8.61e-07,122
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.420649922702764,0.285650984403804,0,0.244981598429908,0.0958454710182364,0,0,2.80912143787413,0.614426133024974,0.923204014111357,0.365950574409639,0.52091337055676,1.11673199600552,1.68828783009504,1.06958773443767,0.883885756421003,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.60289056221049,0.470354828542819,0,0,0,0,0.323533699894818,0,1.93950101254089,0,0.585561594023094,0.209446706813455,0,0,0,0,4.6435098215495,2.74500361691176,0.125654352112864,3.82413504423008,3.3243009452943,1.87009240103604,0.973447578406546,0.101839363850316,0.248813941220186,1.0108910337347,0.841767423545896,0.780722657776222,0.229902104433473,1.26043490863744,0.90422890701429,2.78949646520444,2.43416068541215,1.59292931751539,0.776110112217047,0.215567992932842,0,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,1.03562886267751,0.469052119962192,0.36012412292203,0.710234206755631,0.787056926989615,0.925602677324269,0.465067889500816,0.804820204198858,0.583826711835847,0.987359099480883,0.492502392237286,0.162137619091711,0,0.219550115291051,0.134206418760372,1.68231958851302,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0.637819074629948,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0,2.0871576698413,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.567760340833074,0,0,1.48473110675282,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0.712994756769443,0.316036757935816,0,0,8.85142974959849,0.18006109403131,0,1.28602221018955,1.59606210278046,0.891844088010353,1.48094118541909,0.304464949114599,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,6.76431526421028,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,1.99232754408851,13.5287107662563,17.2818003754719,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,3.22227665555024,6.30185064783336,11.5141632170271,8.90607275701835,9.06472676867641,6.07520250208625,6.30449684513909,4.98456649882625,7.24864436452548,0,0,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.640251524048693,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,1.23625770240992,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,1.0174249164263,0.470546902076653,0.169229215783353,0.365855945745545,1.05227884575137,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.385813221962283,0.249810577937946,0,0.644613162144895,0.191288332068843,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.420649922702764,0.285650984403804,0,0.244981598429908,0.0958454710182364,0,0,2.80912143787413,0.614426133024974,0.923204014111357,0.365950574409639,0.52091337055676,1.11673199600552,1.68828783009504,1.06958773443767,0.883885756421003,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.60289056221049,0.470354828542819,0,0,0,0,0.323533699894818,0,1.93950101254089,0,0.585561594023094,0.209446706813455,0,0,0,0,4.6435098215495,2.74500361691176,0.125654352112864,3.82413504423008,3.3243009452943,1.87009240103604,0.973447578406546,0.101839363850316,0.248813941220186,1.0108910337347,0.841767423545896,0.780722657776222,0.229902104433473,1.26043490863744,0.90422890701429,2.78949646520444,2.43416068541215,1.59292931751539,0.776110112217047,0.215567992932842,0,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,1.03562886267751,0.469052119962192,0.36012412292203,0.710234206755631,0.787056926989615,0.925602677324269,0.465067889500816,0.804820204198858,0.583826711835847,0.987359099480883,0.492502392237286,0.162137619091711,0,0.219550115291051,0.134206418760372,1.68231958851302,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0.637819074629948,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0,2.0871576698413,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.567760340833074,0,0,1.48473110675282,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0.712994756769443,0.316036757935816,0,0,8.85142974959849,0.18006109403131,0,1.28602221018955,1.59606210278046,0.891844088010353,1.48094118541909,0.304464949114599,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,6.76431526421028,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,1.99232754408851,13.5287107662563,17.2818003754719,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,3.22227665555024,6.30185064783336,11.5141632170271,8.90607275701835,9.06472676867641,6.07520250208625,6.30449684513909,4.98456649882625,7.24864436452548,0,0,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.640251524048693,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,1.23625770240992,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,1.0174249164263,0.470546902076653,0.169229215783353,0.365855945745545,1.05227884575137,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.385813221962283,0.249810577937946,0,0.644613162144895,0.191288332068843,0.220591419119515,0
|short_description=p@chr4:110256532..110256536,+
|short_description=p@chr4:110256532..110256536,+
}}
}}

Latest revision as of 13:22, 4 August 2015

Short description:p@chr4:110256532..110256536, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:110256532..110256536, +
Coexpression cluster:MCL_coexpression_mm9:733
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr4:110256532..110256536+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E217.28
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate3.29e-2349
brain1.67e-2247
future brain1.67e-2247
occipital lobe7.15e-2210
visual cortex7.15e-2210
neocortex7.15e-2210
regional part of brain3.71e-2146
neurectoderm4.61e-2164
neural plate4.61e-2164
presumptive neural plate4.61e-2164
anterior neural tube8.70e-2140
neural tube9.94e-2052
neural rod9.94e-2052
future spinal cord9.94e-2052
neural keel9.94e-2052
regional part of forebrain2.98e-1939
forebrain2.98e-1939
future forebrain2.98e-1939
regional part of nervous system7.20e-1954
ecto-epithelium1.43e-1773
brain grey matter1.13e-1529
regional part of telencephalon1.13e-1529
telencephalon1.13e-1529
central nervous system8.17e-1573
regional part of cerebral cortex2.99e-1417
nervous system3.07e-1475
ectoderm-derived structure3.85e-1495
ectoderm3.85e-1495
presumptive ectoderm3.85e-1495
structure with developmental contribution from neural crest1.64e-1392
cerebral cortex3.09e-1321
cerebral hemisphere3.09e-1321
pallium3.09e-1321
gray matter9.10e-1334
regional part of midbrain6.33e-084
midbrain6.33e-084
presumptive midbrain6.33e-084
midbrain neural tube6.33e-084
tube1.01e-07114
adult organism8.16e-0751
anatomical conduit8.61e-07122
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:110256532..110256536,%2B&oldid=3782179"