Personal tools

FFCP PHASE1:Mm9::chr4:129250843..129250873,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16818
|EntrezGene=16818
|HGNC=
|HGNC=
|MCL_coexpression_id=118
|TSSclassifier=NA
|UniProt=P06240,B2KG64
|UniProt=P06240,B2KG64
|association_with_transcript=11bp_to_ENSMUST00000102596,NM_001162433,uc008uxj.2_5end
|association_with_transcript=11bp_to_ENSMUST00000102596,NM_001162433,uc008uxj.2_5end
|cluster_id=chr4:129250843..129250873,-
|description=CAGE_peak_2_at_Lck_5end
|description=CAGE_peak_2_at_Lck_5end
|id=chr4:129250843..129250873,-
|id=chr4:129250843..129250873,-
|ontology_enrichment_celltype=CL:0000838!5.38e-11!12;CL:0000084!1.86e-10!11;CL:0000827!1.86e-10!11;CL:0000542!1.01e-09!13;CL:0000051!1.01e-09!13;CL:0000791!3.54e-09!9;CL:0000789!3.54e-09!9;CL:0002420!3.54e-09!9;CL:0002419!3.54e-09!9;CL:0000790!3.54e-09!9;CL:0000624!2.67e-08!8;CL:0002031!3.46e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000838,1.55e-18,12;CL:0000084,1.45e-17,11;CL:0000827,1.45e-17,11;CL:0000542,7.81e-17,13;CL:0000051,7.81e-17,13;CL:0000791,2.90e-15,9;CL:0000789,2.90e-15,9;CL:0002420,2.90e-15,9;CL:0002419,2.90e-15,9;CL:0000790,2.90e-15,9;CL:0002031,7.17e-15,25;CL:0000624,1.09e-13,8;CL:0000738,4.77e-12,17;CL:0002087,4.77e-12,17;CL:0000893,1.45e-10,6;CL:0002489,1.45e-10,6;CL:0000898,1.45e-10,6;CL:0000809,1.45e-10,6;CL:0000810,1.45e-10,6;CL:0000895,1.45e-10,6;CL:0000808,1.45e-10,6;CL:0000894,1.45e-10,6;CL:0000806,1.45e-10,6;CL:0000807,1.45e-10,6;CL:0000805,1.45e-10,6;CL:0002425,1.45e-10,6;CL:0002436,1.45e-10,6;CL:0002427,1.45e-10,6;CL:0002428,1.45e-10,6;CL:0002429,1.45e-10,6;CL:0002433,1.45e-10,6;CL:0002431,1.45e-10,6;CL:0002432,1.45e-10,6;CL:0000988,1.57e-10,32;CL:0002032,1.57e-10,32;CL:0000037,1.57e-10,32;CL:0000837,1.57e-10,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.53e-17!29;UBERON:0002193!1.42e-14!48;UBERON:0003408!1.62e-14!24;UBERON:0002370!6.66e-14!23;UBERON:0000974!6.66e-14!23;UBERON:0004807!6.66e-14!23;UBERON:0005058!6.66e-14!23;UBERON:0003351!6.66e-14!23;UBERON:0009113!6.66e-14!23;UBERON:0003295!6.66e-14!23;UBERON:0009722!6.66e-14!23;UBERON:0005562!6.66e-14!23;UBERON:0007690!6.66e-14!23;UBERON:0006562!6.40e-13!24;UBERON:0001557!6.40e-13!24;UBERON:0001042!6.40e-13!24;UBERON:0008814!6.40e-13!24;UBERON:0009145!6.40e-13!24;UBERON:0002390!6.54e-13!45;UBERON:0003061!6.54e-13!45;UBERON:0001004!3.66e-12!42;UBERON:0000065!1.33e-11!41;UBERON:0002405!9.40e-11!70;UBERON:0005057!1.55e-10!51;UBERON:0000072!1.89e-10!27;UBERON:0001007!4.42e-09!128;UBERON:0001555!4.42e-09!128;UBERON:0007026!4.42e-09!128;UBERON:0004119!1.31e-08!130;UBERON:0000925!1.31e-08!130;UBERON:0006595!1.31e-08!130;UBERON:0004921!2.26e-08!126;UBERON:0004185!2.26e-08!126;UBERON:0005911!2.98e-07!69;UBERON:0001041!3.31e-07!92;UBERON:0000063!4.73e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.17e-27,29;UBERON:0005057,1.17e-27,29;UBERON:0003408,1.44e-26,24;UBERON:0002193,2.28e-26,48;UBERON:0002405,2.28e-26,48;UBERON:0002370,1.88e-25,23;UBERON:0000974,1.88e-25,23;UBERON:0004807,1.88e-25,23;UBERON:0005058,1.88e-25,23;UBERON:0003351,1.88e-25,23;UBERON:0009113,1.88e-25,23;UBERON:0003295,1.88e-25,23;UBERON:0009722,1.88e-25,23;UBERON:0005562,1.88e-25,23;UBERON:0007690,1.88e-25,23;UBERON:0006562,4.06e-24,24;UBERON:0001557,4.06e-24,24;UBERON:0001042,4.06e-24,24;UBERON:0008814,4.06e-24,24;UBERON:0009145,4.06e-24,24;UBERON:0002390,2.59e-23,45;UBERON:0003061,2.59e-23,45;UBERON:0001004,9.54e-23,42;UBERON:0000065,1.05e-21,41;UBERON:0000077,1.36e-21,35;UBERON:0000072,1.03e-20,27;UBERON:0007811,1.78e-15,36;UBERON:0001041,1.39e-12,80;UBERON:0000153,6.47e-12,43;UBERON:0001007,2.07e-11,116;UBERON:0001555,2.07e-11,116;UBERON:0007026,2.07e-11,116;UBERON:0004119,4.94e-11,118;UBERON:0000925,4.94e-11,118;UBERON:0006595,4.94e-11,118;UBERON:0005911,1.54e-10,69;UBERON:0004921,2.67e-10,114;UBERON:0002530,8.62e-09,65;UBERON:0003081,1.15e-08,87;UBERON:0003929,6.34e-08,55;UBERON:0002368,1.61e-07,60
|phase1_expression=0,0,0,0,0,0,0.233612640595526,125.249623738329,151.20708759089,165.717684635971,52.906352181681,35.099749957948,141.583003653107,137.77455421234,1.66554880907831,3.64455481301687,0.699561878128147,13.5648731104042,15.76815986466,11.8829102503448,4.33720779770456,6.85107563286109,6.00759515019551,1.27993938234725,1.83527424853736,0.57423196411502,0,0,1.71021077510736,3.78045194639896,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,3.18786951509699,156.67822267445,142.503770836405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,3.19714863213368,26.4116641320115,1.33597925158342,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0.125666591329675,0,0.578397427679647,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,3.83185582812887,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.817357396570186,0,0,0.56748166682099,1.31579988682799,0.219550115291051,0.134206418760372,0,0,6.93879444265976,0.528901133327089,0,0,0,0,0.444756087689741,0,0.949058123089023,0.164698954724011,0.502670417600539,0.397912944082302,1.36474860983384,0,0.432276099749388,0.398282546508734,0.189667900953082,0,0,0,0,0,0.189709611372772,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0,8.31389355749721,0,0,0,0,1.00503754465089,0,0.390267295715598,0.945810864637146,1.32878813789265,2.07291199254733,3.76885623846197,4.14443956478149,1.73578870297814,0,0,1.47529281905711,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0.356497378384721,1.8962205476149,0,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0.120625849856312,0.119372344003136,0.164140899745061,0.582961673259701,0,10.5939946094669,0.206386867963223,0.925972636848558,2.44878994106098,5.87785179200408,6.86334519619568,0.509935289981566,0.839708713941948,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0.388844919875379,3.72803587852155,0,0,0,0.194451188344048,0,0.337912250981556,0,0,0,0,0,68.8904242969429,4.25722952109345,8.62772040184549,25.0747188347144,36.3424192204987,52.4518776622539,55.6504931277456,50.5098182937054,53.4112520225701,49.0009766791649,59.1849706753254,64.4196591689764,78.0278035703072,73.1649407656622,0,0,0,0,0.772758376128762,0.375364950902364,1.28206136987086,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0,0.188626341386076,0,0.384150914429216,0.229741875822453,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0.441182838239031,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0.233612640595526,125.249623738329,151.20708759089,165.717684635971,52.906352181681,35.099749957948,141.583003653107,137.77455421234,1.66554880907831,3.64455481301687,0.699561878128147,13.5648731104042,15.76815986466,11.8829102503448,4.33720779770456,6.85107563286109,6.00759515019551,1.27993938234725,1.83527424853736,0.57423196411502,0,0,1.71021077510736,3.78045194639896,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,3.18786951509699,156.67822267445,142.503770836405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,3.19714863213368,26.4116641320115,1.33597925158342,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0.125666591329675,0,0.578397427679647,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,3.83185582812887,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.817357396570186,0,0,0.56748166682099,1.31579988682799,0.219550115291051,0.134206418760372,0,0,6.93879444265976,0.528901133327089,0,0,0,0,0.444756087689741,0,0.949058123089023,0.164698954724011,0.502670417600539,0.397912944082302,1.36474860983384,0,0.432276099749388,0.398282546508734,0.189667900953082,0,0,0,0,0,0.189709611372772,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0,8.31389355749721,0,0,0,0,1.00503754465089,0,0.390267295715598,0.945810864637146,1.32878813789265,2.07291199254733,3.76885623846197,4.14443956478149,1.73578870297814,0,0,1.47529281905711,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0.356497378384721,1.8962205476149,0,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0.120625849856312,0.119372344003136,0.164140899745061,0.582961673259701,0,10.5939946094669,0.206386867963223,0.925972636848558,2.44878994106098,5.87785179200408,6.86334519619568,0.509935289981566,0.839708713941948,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0.388844919875379,3.72803587852155,0,0,0,0.194451188344048,0,0.337912250981556,0,0,0,0,0,68.8904242969429,4.25722952109345,8.62772040184549,25.0747188347144,36.3424192204987,52.4518776622539,55.6504931277456,50.5098182937054,53.4112520225701,49.0009766791649,59.1849706753254,64.4196591689764,78.0278035703072,73.1649407656622,0,0,0,0,0.772758376128762,0.375364950902364,1.28206136987086,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0,0.188626341386076,0,0.384150914429216,0.229741875822453,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0.441182838239031,1.15933917810211
|short_description=p2@Lck
|short_description=p2@Lck
}}
}}

Latest revision as of 09:33, 26 September 2015

Short description:p2@Lck
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lck_5end
Coexpression cluster:MCL_coexpression_mm9:118
Association with transcript: 11bp_to_ENSMUST00000102596, NM_001162433, uc008uxj.2_5end
EntrezGene:Lck
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lck

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9125.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7151.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2165.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E652.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F135.10
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4141.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8137.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.77
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9156.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1142.50
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G210.59
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H15.88
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B568.89
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I28.63
thymus, embryo E16.CNhs11002.456-26C525.07
thymus, embryo E17.CNhs10581.478-18C136.34
thymus, embryo E18.CNhs10595.1273-19G452.45
thymus, neonate N02.CNhs11181.1541-43F855.65
thymus, neonate N03.CNhs11137.2104-43C750.51
thymus, neonate N06.CNhs11197.681-26C453.41
thymus, neonate N07.CNhs11211.713-19D349.00
thymus, neonate N10.CNhs11194.748-24E459.18
thymus, neonate N20.CNhs11186.820-7A264.42
thymus, neonate N25.CNhs11125.1362-25G778.03
thymus, neonate N30.CNhs11132.1393-42G273.16
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.55e-1812
T cell1.45e-1711
pro-T cell1.45e-1711
lymphocyte7.81e-1713
common lymphoid progenitor7.81e-1713
mature alpha-beta T cell2.90e-159
alpha-beta T cell2.90e-159
immature T cell2.90e-159
mature T cell2.90e-159
immature alpha-beta T cell2.90e-159
hematopoietic lineage restricted progenitor cell7.17e-1525
CD4-positive, alpha-beta T cell1.09e-138
leukocyte4.77e-1217
nongranular leukocyte4.77e-1217
thymocyte1.45e-106
double negative thymocyte1.45e-106
naive T cell1.45e-106
double-positive, alpha-beta thymocyte1.45e-106
CD4-positive, alpha-beta thymocyte1.45e-106
naive thymus-derived CD4-positive, alpha-beta T cell1.45e-106
DN4 thymocyte1.45e-106
DN1 thymic pro-T cell1.45e-106
DN2 thymocyte1.45e-106
DN3 thymocyte1.45e-106
immature single positive thymocyte1.45e-106
early T lineage precursor1.45e-106
mature CD4 single-positive thymocyte1.45e-106
resting double-positive thymocyte1.45e-106
double-positive blast1.45e-106
CD69-positive double-positive thymocyte1.45e-106
CD69-positive, CD4-positive single-positive thymocyte1.45e-106
CD4-positive, CD8-intermediate double-positive thymocyte1.45e-106
CD24-positive, CD4 single-positive thymocyte1.45e-106
hematopoietic cell1.57e-1032
hematopoietic oligopotent progenitor cell1.57e-1032
hematopoietic stem cell1.57e-1032
hematopoietic multipotent progenitor cell1.57e-1032

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.17e-2729
immune organ1.17e-2729
gland of gut1.44e-2624
hemolymphoid system2.28e-2648
immune system2.28e-2648
thymus1.88e-2523
neck1.88e-2523
respiratory system epithelium1.88e-2523
hemolymphoid system gland1.88e-2523
pharyngeal epithelium1.88e-2523
thymic region1.88e-2523
pharyngeal gland1.88e-2523
entire pharyngeal arch endoderm1.88e-2523
thymus primordium1.88e-2523
early pharyngeal endoderm1.88e-2523
pharynx4.06e-2424
upper respiratory tract4.06e-2424
chordate pharynx4.06e-2424
pharyngeal arch system4.06e-2424
pharyngeal region of foregut4.06e-2424
hematopoietic system2.59e-2345
blood island2.59e-2345
respiratory system9.54e-2342
respiratory tract1.05e-2141
mixed endoderm/mesoderm-derived structure1.36e-2135
segment of respiratory tract1.03e-2027
craniocervical region1.78e-1536
foregut1.39e-1280
anterior region of body6.47e-1243
digestive system2.07e-11116
digestive tract2.07e-11116
primitive gut2.07e-11116
endoderm-derived structure4.94e-11118
endoderm4.94e-11118
presumptive endoderm4.94e-11118
endo-epithelium1.54e-1069
subdivision of digestive tract2.67e-10114
gland8.62e-0965
lateral plate mesoderm1.15e-0887
gut epithelium6.34e-0855
endocrine gland1.61e-0760
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:129250843..129250873,-&oldid=4246291"