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FFCP PHASE1:Mm9::chr4:131604903..131604927,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269587
|EntrezGene=269587
|HGNC=
|HGNC=
|MCL_coexpression_id=729
|TSSclassifier=NA
|UniProt=P48193,E9PWN5,E9Q6Q1,A2A840
|UniProt=P48193,E9PWN5,E9Q6Q1,A2A840
|association_with_transcript=65bp_to_ENSMUST00000084253,ENSMUST00000097859,ENSMUST00000105969,ENSMUST00000105981,NM_001128606,uc008val.2_5end
|association_with_transcript=65bp_to_ENSMUST00000084253,ENSMUST00000097859,ENSMUST00000105969,ENSMUST00000105981,NM_001128606,uc008val.2_5end
|cluster_id=chr4:131604903..131604927,-
|description=CAGE_peak_5_at_Epb4.1_5end
|description=CAGE_peak_5_at_Epb4.1_5end
|id=chr4:131604903..131604927,-
|id=chr4:131604903..131604927,-
|ontology_enrichment_celltype=CL:0000540!8.02e-13!33;CL:0000047!8.02e-13!33;CL:0000031!8.02e-13!33;CL:0000404!8.02e-13!33;CL:0000117!7.93e-10!23;CL:0000337!7.93e-10!23;CL:0000393!1.37e-08!39;CL:0000211!1.37e-08!39;CL:0000221!3.90e-08!44;CL:0000133!3.90e-08!44;CL:0002319!7.38e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000540,3.39e-11,33;CL:0000047,3.39e-11,33;CL:0000031,3.39e-11,33;CL:0000404,3.39e-11,33;CL:0000117,1.96e-09,23;CL:0000337,1.96e-09,23;CL:0000393,1.08e-08,39;CL:0000211,1.08e-08,39;CL:0002319,2.35e-08,43;CL:0000221,4.76e-08,44;CL:0000133,4.76e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.54e-13!71;UBERON:0003075!6.54e-13!71;UBERON:0007284!6.54e-13!71;UBERON:0000153!1.43e-12!94;UBERON:0004121!1.71e-12!102;UBERON:0000924!1.71e-12!102;UBERON:0006601!1.71e-12!102;UBERON:0001017!1.14e-11!73;UBERON:0005743!1.14e-11!73;UBERON:0000033!1.42e-11!63;UBERON:0000073!4.47e-11!75;UBERON:0001016!4.47e-11!75;UBERON:0007811!9.65e-11!86;UBERON:0003056!1.28e-10!49;UBERON:0001049!2.64e-08!52;UBERON:0005068!2.64e-08!52;UBERON:0006241!2.64e-08!52;UBERON:0007135!2.64e-08!52;UBERON:0000970!2.51e-07!9;UBERON:0000019!2.51e-07!9;UBERON:0000047!2.51e-07!9;UBERON:0004088!2.51e-07!9;UBERON:0002104!2.51e-07!9;UBERON:0001456!2.51e-07!9;UBERON:0003072!2.51e-07!9;UBERON:0003071!2.51e-07!9;UBERON:0004128!2.51e-07!9;UBERON:0002616!2.85e-07!49;UBERON:0000955!8.69e-07!50;UBERON:0006238!8.69e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.71e-17,64;UBERON:0003075,1.71e-17,64;UBERON:0007284,1.71e-17,64;UBERON:0004121,2.30e-16,95;UBERON:0000924,2.30e-16,95;UBERON:0006601,2.30e-16,95;UBERON:0010371,3.03e-15,73;UBERON:0000970,2.45e-14,9;UBERON:0000019,2.45e-14,9;UBERON:0000047,2.45e-14,9;UBERON:0010312,2.45e-14,9;UBERON:0004088,2.45e-14,9;UBERON:0002104,2.45e-14,9;UBERON:0001456,2.45e-14,9;UBERON:0003072,2.45e-14,9;UBERON:0004128,2.45e-14,9;UBERON:0003071,2.45e-14,9;UBERON:0003056,3.65e-13,49;UBERON:0000020,2.95e-12,12;UBERON:0001032,2.95e-12,12;UBERON:0004456,2.95e-12,12;UBERON:0001017,5.51e-12,73;UBERON:0001016,1.96e-11,75;UBERON:0001444,2.71e-11,11;UBERON:0000033,4.17e-11,13;UBERON:0005085,4.17e-11,13;UBERON:0010314,6.21e-11,92;UBERON:0000073,3.84e-08,54;UBERON:0001049,7.45e-08,52;UBERON:0005068,7.45e-08,52;UBERON:0006241,7.45e-08,52;UBERON:0007135,7.45e-08,52
|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0,0.129123323441576,1.12630977721333,0.70219357896598,0,0.159544317990673,0.171200729931206,0.524522414513984,0,0,0,0.315462165358238,0.685572168028694,0.42438965179803,0.935476191661768,0.0992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0.838913030288682,0,2.35265659399725,0.257259436035947,0,0,2.63011399117477,5.28990979272033,3.80298842103708,0,0,0,0,0,1.19840044207362,0,1.24427534770173,2.02508907497536,0.841299845405528,1.14260393761521,0.662605622854841,0.979926393719632,1.72521847832825,0.919218786610021,1.10115880999389,0.766124028511126,0.46081959976873,3.03338461779446,3.47653045689157,5.2091337055676,0.837548997004143,0.56276261003168,0.30559649555362,1.17851434189467,1.56608848879013,1.4911955666024,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,1.29468941823586,0,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,1.17588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,9.66176630138106,12.1479089951804,0,0.11981512450592,0,0,1.64769703345305,0,0.628271760564322,0.347648640384553,0,0.62336413367868,0.811206315338788,0.305518091550949,0.248813941220186,0,5.89237196482127,1.82168620147785,1.83921683546778,3.42118046630164,2.10986744970001,5.91917542616552,6.91814089538189,7.77724313845749,11.9003550539947,1.5089759505299,1.89106080167819,2.28736461413134,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.350296027101508,0.329119699826961,0,0.243206428637567,0,0.219550115291051,0.402619256281115,0.420579897128254,0.92614151141356,0.660837565967596,0,1.70630600428187,1.62565670302307,0.257734922644187,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,1.1270773567308,0.203651327845314,0.775809948670503,0.631222379012867,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.786235980452812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,1.13694847062291,0.977789858652155,0.848725428875941,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.788175720530955,0.44292937929755,0.637819074629948,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0,0,1.89304931649754,1.56175497718655,0.646270193198397,1.19484398976276,0.222798674082394,0.849229592366497,0.809621403349789,1.75353514746787,0.790575555893047,0,0.425820255624806,0.712262414669021,1.30309567482861,0.164970122972535,0,0.728341908464944,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.948110273807448,1.05418608574999,1.03135543248187,1.02131881726136,3.42116078659489,1.55230420539305,1.07168517515796,1.24138163549592,0.713475270408282,0.329098041204242,1.8267896946876,0.704015124191131,0.21183207086382,1.54369878638473,0,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0.169978429993855,0.279902904647316,0.276399947608848,0,1.26534397432454,0.406638934253697,0.432021363287205,0.627264888043406,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.897099276263873,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.821500670520278,0.781226309063701,0.629156066554265,0.241584120826006,0,1.26404448251271,0.810900861160657,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.721172697119813,0.738447635872886,0.605798699688886,0.762068066549998,0.201652370273681,0.877120926657772,0.384847366561318,0.701261413089414,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0.501572104035363,1.6942555278512,0,0,0.343706364687375,2.05524755931193,1.5107877947794,0,0.45032120322422,0,0.51776031175182,4.04770655578289,3.19219898720825,1.36586884603307,0.729320151204882,1.04806581313991,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0.561849044819294,0.640251524048693,0.689225627467359,1.42888107384922,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,2.40008476669791,0.532427418478012,0,0.145346416632329,0.564656282491984,1.01537529470012,0.548783918618318,0.263069711437843,0.407412341537585,1.12228454331548,0.474540072496697,0.886540341380071,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0,0.129123323441576,1.12630977721333,0.70219357896598,0,0.159544317990673,0.171200729931206,0.524522414513984,0,0,0,0.315462165358238,0.685572168028694,0.42438965179803,0.935476191661768,0.0992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0.838913030288682,0,2.35265659399725,0.257259436035947,0,0,2.63011399117477,5.28990979272033,3.80298842103708,0,0,0,0,0,1.19840044207362,0,1.24427534770173,2.02508907497536,0.841299845405528,1.14260393761521,0.662605622854841,0.979926393719632,1.72521847832825,0.919218786610021,1.10115880999389,0.766124028511126,0.46081959976873,3.03338461779446,3.47653045689157,5.2091337055676,0.837548997004143,0.56276261003168,0.30559649555362,1.17851434189467,1.56608848879013,1.4911955666024,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,1.29468941823586,0,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,1.17588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,9.66176630138106,12.1479089951804,0,0.11981512450592,0,0,1.64769703345305,0,0.628271760564322,0.347648640384553,0,0.62336413367868,0.811206315338788,0.305518091550949,0.248813941220186,0,5.89237196482127,1.82168620147785,1.83921683546778,3.42118046630164,2.10986744970001,5.91917542616552,6.91814089538189,7.77724313845749,11.9003550539947,1.5089759505299,1.89106080167819,2.28736461413134,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.350296027101508,0.329119699826961,0,0.243206428637567,0,0.219550115291051,0.402619256281115,0.420579897128254,0.92614151141356,0.660837565967596,0,1.70630600428187,1.62565670302307,0.257734922644187,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,1.1270773567308,0.203651327845314,0.775809948670503,0.631222379012867,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.786235980452812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,1.13694847062291,0.977789858652155,0.848725428875941,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.788175720530955,0.44292937929755,0.637819074629948,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0,0,1.89304931649754,1.56175497718655,0.646270193198397,1.19484398976276,0.222798674082394,0.849229592366497,0.809621403349789,1.75353514746787,0.790575555893047,0,0.425820255624806,0.712262414669021,1.30309567482861,0.164970122972535,0,0.728341908464944,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.948110273807448,1.05418608574999,1.03135543248187,1.02131881726136,3.42116078659489,1.55230420539305,1.07168517515796,1.24138163549592,0.713475270408282,0.329098041204242,1.8267896946876,0.704015124191131,0.21183207086382,1.54369878638473,0,0.322928853391811,0.180938774784468,0.238744688006273,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0.169978429993855,0.279902904647316,0.276399947608848,0,1.26534397432454,0.406638934253697,0.432021363287205,0.627264888043406,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.897099276263873,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.821500670520278,0.781226309063701,0.629156066554265,0.241584120826006,0,1.26404448251271,0.810900861160657,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.721172697119813,0.738447635872886,0.605798699688886,0.762068066549998,0.201652370273681,0.877120926657772,0.384847366561318,0.701261413089414,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0.501572104035363,1.6942555278512,0,0,0.343706364687375,2.05524755931193,1.5107877947794,0,0.45032120322422,0,0.51776031175182,4.04770655578289,3.19219898720825,1.36586884603307,0.729320151204882,1.04806581313991,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0.561849044819294,0.640251524048693,0.689225627467359,1.42888107384922,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,2.40008476669791,0.532427418478012,0,0.145346416632329,0.564656282491984,1.01537529470012,0.548783918618318,0.263069711437843,0.407412341537585,1.12228454331548,0.474540072496697,0.886540341380071,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p5@Epb4.1
|short_description=p5@Epb4.1
}}
}}

Latest revision as of 10:35, 26 September 2015

Short description:p5@Epb4.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Epb4.1_5end
Coexpression cluster:MCL_coexpression_mm9:729
Association with transcript: 65bp_to_ENSMUST00000084253, ENSMUST00000097859, ENSMUST00000105969, ENSMUST00000105981, NM_001128606, uc008val.2_5end
EntrezGene:Epb4.1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Epb4.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I212.15
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C65.92
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.39e-1133
neuronal stem cell3.39e-1133
neuroblast3.39e-1133
electrically signaling cell3.39e-1133
CNS neuron (sensu Vertebrata)1.96e-0923
neuroblast (sensu Vertebrata)1.96e-0923
electrically responsive cell1.08e-0839
electrically active cell1.08e-0839
neural cell2.35e-0843
ectodermal cell4.76e-0844
neurectodermal cell4.76e-0844

Uber anatomy
Ontology termp-valuen
neurectoderm1.71e-1764
neural plate1.71e-1764
presumptive neural plate1.71e-1764
ectoderm-derived structure2.30e-1695
ectoderm2.30e-1695
presumptive ectoderm2.30e-1695
ecto-epithelium3.03e-1573
eye2.45e-149
camera-type eye2.45e-149
simple eye2.45e-149
immature eye2.45e-149
ocular region2.45e-149
visual system2.45e-149
face2.45e-149
optic cup2.45e-149
optic vesicle2.45e-149
eye primordium2.45e-149
pre-chordal neural plate3.65e-1349
sense organ2.95e-1212
sensory system2.95e-1212
entire sense organ system2.95e-1212
central nervous system5.51e-1273
nervous system1.96e-1175
subdivision of head2.71e-1111
head4.17e-1113
ectodermal placode4.17e-1113
structure with developmental contribution from neural crest6.21e-1192
regional part of nervous system3.84e-0854
neural tube7.45e-0852
neural rod7.45e-0852
future spinal cord7.45e-0852
neural keel7.45e-0852
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