FFCP PHASE1:Mm9::chr2:127096430..127096483,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=99138 | |EntrezGene=99138 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BXP7,F7BBA2 | |UniProt=Q8BXP7,F7BBA2 | ||
|association_with_transcript=0bp_to_ENSMUST00000110374,ENSMUST00000125049_5end | |association_with_transcript=0bp_to_ENSMUST00000110374,ENSMUST00000125049_5end | ||
|cluster_id=chr2:127096430..127096483,+ | |||
|description=CAGE_peak_2_at_Stard7_5end | |description=CAGE_peak_2_at_Stard7_5end | ||
|id=chr2:127096430..127096483,+ | |id=chr2:127096430..127096483,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.82e-11!102;UBERON:0000924!5.82e-11!102;UBERON:0006601!5.82e-11!102;UBERON:0000955!1.78e-09!50;UBERON:0006238!1.78e-09!50;UBERON:0001017!1.94e-09!73;UBERON:0005743!1.94e-09!73;UBERON:0000033!2.85e-09!63;UBERON:0002616!3.04e-09!49;UBERON:0001049!4.75e-09!52;UBERON:0005068!4.75e-09!52;UBERON:0006241!4.75e-09!52;UBERON:0007135!4.75e-09!52;UBERON:0000073!1.19e-08!75;UBERON:0001016!1.19e-08!75;UBERON:0002020!2.38e-08!34;UBERON:0002021!5.49e-08!10;UBERON:0000411!5.49e-08!10;UBERON:0001950!5.49e-08!10;UBERON:0002346!6.31e-08!71;UBERON:0003075!6.31e-08!71;UBERON:0007284!6.31e-08!71;UBERON:0003080!6.72e-08!40;UBERON:0002791!8.01e-08!29;UBERON:0003528!8.01e-08!29;UBERON:0001893!8.01e-08!29;UBERON:0002780!1.02e-07!39;UBERON:0001890!1.02e-07!39;UBERON:0006240!1.02e-07!39;UBERON:0003056!3.92e-07!49;UBERON:0002619!4.95e-07!17;UBERON:0000956!5.70e-07!21;UBERON:0001869!5.70e-07!21;UBERON:0000203!5.70e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.43e-11,95;UBERON:0000924,2.43e-11,95;UBERON:0006601,2.43e-11,95;UBERON:0010371,3.31e-10,73;UBERON:0000073,6.87e-10,54;UBERON:0001017,1.94e-09,73;UBERON:0001049,4.75e-09,52;UBERON:0005068,4.75e-09,52;UBERON:0006241,4.75e-09,52;UBERON:0007135,4.75e-09,52;UBERON:0001016,1.19e-08,75;UBERON:0000955,1.77e-08,47;UBERON:0006238,1.77e-08,47;UBERON:0002346,2.13e-08,64;UBERON:0003075,2.13e-08,64;UBERON:0007284,2.13e-08,64;UBERON:0002020,2.38e-08,34;UBERON:0002616,2.97e-08,46;UBERON:0002021,5.49e-08,10;UBERON:0000411,5.49e-08,10;UBERON:0001950,5.49e-08,10;UBERON:0003080,6.72e-08,40;UBERON:0003528,8.01e-08,29;UBERON:0002791,8.01e-08,29;UBERON:0001893,8.01e-08,29;UBERON:0002780,1.02e-07,39;UBERON:0001890,1.02e-07,39;UBERON:0006240,1.02e-07,39;UBERON:0003056,3.92e-07,49;UBERON:0002619,4.95e-07,17;UBERON:0000956,5.70e-07,21;UBERON:0001869,5.70e-07,21;UBERON:0000203,5.70e-07,21 | |||
|phase1_expression=5.92550734287738,2.44282785347553,2.72999543633722,0.90739263392049,1.50268718983904,3.69334398206158,2.80335168714631,11.7502224331834,5.34997144176334,7.0219357896598,2.91070545983358,2.71225340584144,10.1008430659411,9.09172185157573,8.66085380720723,6.07425802169478,2.79824751251259,15.7731082679119,14.2599010949968,17.8243653755173,8.07911256435163,4.86525660884338,6.52999472847338,4.7997726838022,5.27641346454491,1.14846392823004,2.58457197695445,2.80112602491656,3.42042155021473,4.53654233567875,4.8780712344167,3.17515336729816,7.38077745101484,0,3.17736781726402,2.82598897109437,1.42918549383658,33.0639988282157,28.9094077473806,36.6466620781659,62.3525377312875,54.6436387966757,48.0655249500842,4.40638862914521,3.85232338634155,2.20256102594018,4.69434806608824,5.23260375313072,6.37089929929968,9.13820525649132,5.5994568650145,12.9377307928474,15.939347575485,10.8804321301702,14.7881271622684,3.08711323243136,6.87680255853016,9.28209766099396,7.68802551266472,6.34789175126439,10.775133859605,2.37191172448392,2.66788438833342,3.1496490104849,5.93319817540185,4.9733608046227,2.39680088414724,6.14749288514487,6.73982480005105,8.10035629990144,7.78202357000113,7.42692559449889,13.4729809980484,6.49201235839256,4.88811902193005,11.0306254393203,13.2139057199266,15.4501679083077,16.8967186581868,8.83638127792299,8.14240028061446,10.4182674111352,16.1926139420801,13.5063026407603,19.2525792198781,11.490514833473,13.3829379951157,7.64237727883732,2.95332153999418,4.6854367266207,9.27566363845369,23.2314446784974,13.599426674155,22.1278308571505,27.9403859502498,25.5375325645481,11.5164424508037,4.09032774187339,1.29893002301434,3.88673531961374,6.05626705039726,3.84979432242953,5.09610479413291,7.11066703153331,3.030874574157,1.01343946190039,3.53867111510348,10.1623652949963,22.0097201100096,9.50029690014878,4.8575891494518,6.08930956624282,5.5347719341454,7.23468674652588,9.28950786372068,7.6656620711102,10.3821886448437,4.04878199375753,21.230653246797,12.1325137460557,10.6003928860989,8.24287930329878,5.59175283654366,13.1751358655196,16.7557365450764,3.32094171771169,2.99537811264801,2.39961092397363,4.95573885584952,11.2342979553617,11.4375150704657,5.40313714085317,25.7259993884569,45.0059204901382,13.714010940931,14.6017136760982,3.86989582631202,12.067476149179,5.81262344397452,52.1895802598455,2.47228841629137,4.59804208866946,4.68161537493908,6.93242162044289,6.73561341598146,8.19927809823039,6.37171727006156,110.725042676299,1.72454394346274,1.89106080167819,3.51902248327898,5.04150184583422,4.17070873838397,17.7608604926305,28.1921526878883,3.38358253591438,3.51106593656617,2.05878325691772,5.96743348730745,3.31401236056803,3.28336483973535,3.06105504483725,4.26140524053378,2.75469924446365,4.01094493507183,3.95307706075693,2.14618721119695,3.50296027101508,2.13927804887525,6.56669856316381,4.05344047729279,5.99419948443863,5.26920276698522,8.45500438190342,25.6553737248235,14.3037411207205,5.28670052774077,1.05780226665418,1.91959425481711,2.09013004674395,3.35055399437443,4.84040459096022,3.33567065767305,2.85338439168839,1.89811624617805,1.97638745668813,2.26201687920243,2.58643413653496,3.70431765526328,7.19055526923377,3.02593269824572,3.98282546508734,3.79335801906163,3.31320686568214,1.1270773567308,4.68398054044223,4.26695471768777,5.04977903210294,4.42655759869801,3.98547399544926,4.23896565171712,5.79966670432462,12.7474629647474,3.50374722003798,4.91397487783007,5.8464149220062,4.66578279193557,6.27060615356284,3.8193877767213,6.32931502391783,2.91843408195064,5.76578967694971,7.18841032636773,3.72140947668503,5.92871578917665,9.85057623993736,11.4814344654024,21.7099584613515,7.7596339869974,3.03186258832776,2.77040459951444,3.73439188705414,1.64283173801951,4.52266895092903,7.14130922658041,8.19561321002755,5.35959489961049,5.53661724121937,6.05928120898451,9.5040722535128,6.73471429276993,9.40218880779825,16.5870412333199,18.4927932498361,13.277635371514,10.4855963595798,10.5963389391943,13.0104972117346,2.78689407140348,37.8706390806559,5.99465616890888,6.63745865304285,13.5716740571663,6.69112634267146,6.68396022247182,8.77537245445381,10.1202675418724,8.47541987942804,11.0680577825027,12.2102100240287,7.66476460124651,3.5613120733451,3.58351310577867,6.76377504187395,33.1862845849907,6.31229654002952,6.04647113929502,20.9351638529047,21.8523400731772,20.5981549122431,13.9551278310839,9.08834323693764,13.9033977570041,24.3348303610578,33.7339547439996,16.5016869197099,18.7241783164583,3.96134406868882,3.23396709456886,5.14408884075822,12.0591358876746,10.3453914209201,9.05019613311665,10.0473433207818,4.92810586933792,13.7690846061483,31.7560893199145,17.6428290647384,29.8709189387425,14.1132244331885,18.6220856644893,12.3105674808796,2.62332752966866,10.7546675166096,9.05615668228619,4.54051109519089,7.59297562215818,2.82552685507037,5.74115756428306,6.40578884978263,4.9293744698218,5.03825228365169,5.66619892598138,15.2747298882418,2.05618395827738,4.47302827679067,4.64422965533745,13.1725626489115,18.7791804821713,11.4634694427098,8.34799902825893,12.3025292732494,4.14767914533737,26.0962511496509,6.20062232552609,2.8408143748356,2.48187735685646,2.52786544847262,3.87479470433193,5.06868376472335,5.75050469364194,6.38001485735356,12.4782619866596,13.0455425246043,12.9613502816039,7.2682557744481,3.44632865993279,4.21114924375792,4.15746633528944,4.65469408735452,4.17230845040656,2.88469078847925,3.98761723371358,4.54349024766664,3.58171991278499,4.13387359061046,4.58052039476836,5.38786313185845,9.70078288107022,49.2004932445009,8.21348027484039,2.87084341150322,8.89788466729616,4.82973985080476,6.38120416534019,4.02933573387983,11.1471557121114,19.5613120573792,81.8890171794746,76.8743144966985,68.7474616127276,71.490923854974,56.8618491409633,57.4099362016172,61.4270475210943,39.1779446805072,41.2359592175626,43.4918661871529,3.73634451303036,4.78829848081237,4.26834014385335,6.32077464377565,7.54607385460736,10.2952364732008,10.4455962066759,9.47761263298913,10.9112531261217,7.58091635291392,10.1391719956096,8.86543804514558,8.61501868722918,8.32326981263301,8.44301393647515,9.52587382566147,7.3007125345259,8.87382414133043,6.59337441285291,10.745521169811,15.4291163573437,9.58369353260422,8.58370283810355,9.30217066446903,10.1638130848557,8.88453382862603,8.78054269789308,12.8904158604543,11.0001332215148,10.1005608898393,7.23673610557462,7.97886307242064,7.7753898202241,8.36658942404216,12.1531164918119,12.4905288968973,14.0358965067245,14.396360621236,18.5549682106778,13.8972594045295,11.3615239454007 | |phase1_expression=5.92550734287738,2.44282785347553,2.72999543633722,0.90739263392049,1.50268718983904,3.69334398206158,2.80335168714631,11.7502224331834,5.34997144176334,7.0219357896598,2.91070545983358,2.71225340584144,10.1008430659411,9.09172185157573,8.66085380720723,6.07425802169478,2.79824751251259,15.7731082679119,14.2599010949968,17.8243653755173,8.07911256435163,4.86525660884338,6.52999472847338,4.7997726838022,5.27641346454491,1.14846392823004,2.58457197695445,2.80112602491656,3.42042155021473,4.53654233567875,4.8780712344167,3.17515336729816,7.38077745101484,0,3.17736781726402,2.82598897109437,1.42918549383658,33.0639988282157,28.9094077473806,36.6466620781659,62.3525377312875,54.6436387966757,48.0655249500842,4.40638862914521,3.85232338634155,2.20256102594018,4.69434806608824,5.23260375313072,6.37089929929968,9.13820525649132,5.5994568650145,12.9377307928474,15.939347575485,10.8804321301702,14.7881271622684,3.08711323243136,6.87680255853016,9.28209766099396,7.68802551266472,6.34789175126439,10.775133859605,2.37191172448392,2.66788438833342,3.1496490104849,5.93319817540185,4.9733608046227,2.39680088414724,6.14749288514487,6.73982480005105,8.10035629990144,7.78202357000113,7.42692559449889,13.4729809980484,6.49201235839256,4.88811902193005,11.0306254393203,13.2139057199266,15.4501679083077,16.8967186581868,8.83638127792299,8.14240028061446,10.4182674111352,16.1926139420801,13.5063026407603,19.2525792198781,11.490514833473,13.3829379951157,7.64237727883732,2.95332153999418,4.6854367266207,9.27566363845369,23.2314446784974,13.599426674155,22.1278308571505,27.9403859502498,25.5375325645481,11.5164424508037,4.09032774187339,1.29893002301434,3.88673531961374,6.05626705039726,3.84979432242953,5.09610479413291,7.11066703153331,3.030874574157,1.01343946190039,3.53867111510348,10.1623652949963,22.0097201100096,9.50029690014878,4.8575891494518,6.08930956624282,5.5347719341454,7.23468674652588,9.28950786372068,7.6656620711102,10.3821886448437,4.04878199375753,21.230653246797,12.1325137460557,10.6003928860989,8.24287930329878,5.59175283654366,13.1751358655196,16.7557365450764,3.32094171771169,2.99537811264801,2.39961092397363,4.95573885584952,11.2342979553617,11.4375150704657,5.40313714085317,25.7259993884569,45.0059204901382,13.714010940931,14.6017136760982,3.86989582631202,12.067476149179,5.81262344397452,52.1895802598455,2.47228841629137,4.59804208866946,4.68161537493908,6.93242162044289,6.73561341598146,8.19927809823039,6.37171727006156,110.725042676299,1.72454394346274,1.89106080167819,3.51902248327898,5.04150184583422,4.17070873838397,17.7608604926305,28.1921526878883,3.38358253591438,3.51106593656617,2.05878325691772,5.96743348730745,3.31401236056803,3.28336483973535,3.06105504483725,4.26140524053378,2.75469924446365,4.01094493507183,3.95307706075693,2.14618721119695,3.50296027101508,2.13927804887525,6.56669856316381,4.05344047729279,5.99419948443863,5.26920276698522,8.45500438190342,25.6553737248235,14.3037411207205,5.28670052774077,1.05780226665418,1.91959425481711,2.09013004674395,3.35055399437443,4.84040459096022,3.33567065767305,2.85338439168839,1.89811624617805,1.97638745668813,2.26201687920243,2.58643413653496,3.70431765526328,7.19055526923377,3.02593269824572,3.98282546508734,3.79335801906163,3.31320686568214,1.1270773567308,4.68398054044223,4.26695471768777,5.04977903210294,4.42655759869801,3.98547399544926,4.23896565171712,5.79966670432462,12.7474629647474,3.50374722003798,4.91397487783007,5.8464149220062,4.66578279193557,6.27060615356284,3.8193877767213,6.32931502391783,2.91843408195064,5.76578967694971,7.18841032636773,3.72140947668503,5.92871578917665,9.85057623993736,11.4814344654024,21.7099584613515,7.7596339869974,3.03186258832776,2.77040459951444,3.73439188705414,1.64283173801951,4.52266895092903,7.14130922658041,8.19561321002755,5.35959489961049,5.53661724121937,6.05928120898451,9.5040722535128,6.73471429276993,9.40218880779825,16.5870412333199,18.4927932498361,13.277635371514,10.4855963595798,10.5963389391943,13.0104972117346,2.78689407140348,37.8706390806559,5.99465616890888,6.63745865304285,13.5716740571663,6.69112634267146,6.68396022247182,8.77537245445381,10.1202675418724,8.47541987942804,11.0680577825027,12.2102100240287,7.66476460124651,3.5613120733451,3.58351310577867,6.76377504187395,33.1862845849907,6.31229654002952,6.04647113929502,20.9351638529047,21.8523400731772,20.5981549122431,13.9551278310839,9.08834323693764,13.9033977570041,24.3348303610578,33.7339547439996,16.5016869197099,18.7241783164583,3.96134406868882,3.23396709456886,5.14408884075822,12.0591358876746,10.3453914209201,9.05019613311665,10.0473433207818,4.92810586933792,13.7690846061483,31.7560893199145,17.6428290647384,29.8709189387425,14.1132244331885,18.6220856644893,12.3105674808796,2.62332752966866,10.7546675166096,9.05615668228619,4.54051109519089,7.59297562215818,2.82552685507037,5.74115756428306,6.40578884978263,4.9293744698218,5.03825228365169,5.66619892598138,15.2747298882418,2.05618395827738,4.47302827679067,4.64422965533745,13.1725626489115,18.7791804821713,11.4634694427098,8.34799902825893,12.3025292732494,4.14767914533737,26.0962511496509,6.20062232552609,2.8408143748356,2.48187735685646,2.52786544847262,3.87479470433193,5.06868376472335,5.75050469364194,6.38001485735356,12.4782619866596,13.0455425246043,12.9613502816039,7.2682557744481,3.44632865993279,4.21114924375792,4.15746633528944,4.65469408735452,4.17230845040656,2.88469078847925,3.98761723371358,4.54349024766664,3.58171991278499,4.13387359061046,4.58052039476836,5.38786313185845,9.70078288107022,49.2004932445009,8.21348027484039,2.87084341150322,8.89788466729616,4.82973985080476,6.38120416534019,4.02933573387983,11.1471557121114,19.5613120573792,81.8890171794746,76.8743144966985,68.7474616127276,71.490923854974,56.8618491409633,57.4099362016172,61.4270475210943,39.1779446805072,41.2359592175626,43.4918661871529,3.73634451303036,4.78829848081237,4.26834014385335,6.32077464377565,7.54607385460736,10.2952364732008,10.4455962066759,9.47761263298913,10.9112531261217,7.58091635291392,10.1391719956096,8.86543804514558,8.61501868722918,8.32326981263301,8.44301393647515,9.52587382566147,7.3007125345259,8.87382414133043,6.59337441285291,10.745521169811,15.4291163573437,9.58369353260422,8.58370283810355,9.30217066446903,10.1638130848557,8.88453382862603,8.78054269789308,12.8904158604543,11.0001332215148,10.1005608898393,7.23673610557462,7.97886307242064,7.7753898202241,8.36658942404216,12.1531164918119,12.4905288968973,14.0358965067245,14.396360621236,18.5549682106778,13.8972594045295,11.3615239454007 | ||
|short_description=p2@Stard7 | |short_description=p2@Stard7 | ||
}} | }} |
Latest revision as of 16:23, 25 September 2015
Short description: | p2@Stard7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stard7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000110374, ENSMUST00000125049_5end |
EntrezGene: | Stard7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.43e-11 | 95 |
ectoderm | 2.43e-11 | 95 |
presumptive ectoderm | 2.43e-11 | 95 |
ecto-epithelium | 3.31e-10 | 73 |
regional part of nervous system | 6.87e-10 | 54 |
central nervous system | 1.94e-09 | 73 |
neural tube | 4.75e-09 | 52 |
neural rod | 4.75e-09 | 52 |
future spinal cord | 4.75e-09 | 52 |
neural keel | 4.75e-09 | 52 |
nervous system | 1.19e-08 | 75 |
brain | 1.77e-08 | 47 |
future brain | 1.77e-08 | 47 |
neurectoderm | 2.13e-08 | 64 |
neural plate | 2.13e-08 | 64 |
presumptive neural plate | 2.13e-08 | 64 |
gray matter | 2.38e-08 | 34 |
regional part of brain | 2.97e-08 | 46 |
occipital lobe | 5.49e-08 | 10 |
visual cortex | 5.49e-08 | 10 |
neocortex | 5.49e-08 | 10 |
anterior neural tube | 6.72e-08 | 40 |
brain grey matter | 8.01e-08 | 29 |
regional part of telencephalon | 8.01e-08 | 29 |
telencephalon | 8.01e-08 | 29 |
regional part of forebrain | 1.02e-07 | 39 |
forebrain | 1.02e-07 | 39 |
future forebrain | 1.02e-07 | 39 |
pre-chordal neural plate | 3.92e-07 | 49 |
regional part of cerebral cortex | 4.95e-07 | 17 |
cerebral cortex | 5.70e-07 | 21 |
cerebral hemisphere | 5.70e-07 | 21 |
pallium | 5.70e-07 | 21 |