Personal tools

FFCP PHASE1:Mm9::chr2:12932442..12932491,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227580
|EntrezGene=227580
|HGNC=
|HGNC=
|MCL_coexpression_id=1623
|TSSclassifier=NA
|UniProt=B0LXL6,Q9ESN4
|UniProt=B0LXL6,Q9ESN4
|association_with_transcript=0bp_to_NM_153155,uc008ijv.1_5end
|association_with_transcript=0bp_to_NM_153155,uc008ijv.1_5end
|cluster_id=chr2:12932442..12932491,-
|description=CAGE_peak_3_at_C1ql3_5end
|description=CAGE_peak_3_at_C1ql3_5end
|id=chr2:12932442..12932491,-
|id=chr2:12932442..12932491,-
|ontology_enrichment_celltype=CL:0000055!9.37e-10!50;CL:0000221!1.32e-09!44;CL:0000133!1.32e-09!44;CL:0002319!2.84e-09!43;CL:0000393!1.85e-07!39;CL:0000211!1.85e-07!39
|ontology_enrichment_celltype=CL:0000055!9.37e-10!50;CL:0000221!1.32e-09!44;CL:0000133!1.32e-09!44;CL:0002319!2.84e-09!43;CL:0000393!1.85e-07!39;CL:0000211!1.85e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-12,43;CL:0000221,4.55e-12,44;CL:0000133,4.55e-12,44;CL:0000333,2.58e-08,10;CL:0000095,2.58e-08,10;CL:0000243,2.58e-08,10;CL:0000123,2.58e-08,10;CL:0000125,2.58e-08,10;CL:0000030,2.58e-08,10;CL:0000339,2.58e-08,10;CL:0002321,2.00e-07,70;CL:0000393,6.75e-07,39;CL:0000211,6.75e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.18e-19!75;UBERON:0001016!1.18e-19!75;UBERON:0001017!2.97e-18!73;UBERON:0005743!2.97e-18!73;UBERON:0004121!7.92e-18!102;UBERON:0000924!7.92e-18!102;UBERON:0006601!7.92e-18!102;UBERON:0000033!4.61e-15!63;UBERON:0002346!4.34e-14!71;UBERON:0003075!4.34e-14!71;UBERON:0007284!4.34e-14!71;UBERON:0001049!1.81e-12!52;UBERON:0005068!1.81e-12!52;UBERON:0006241!1.81e-12!52;UBERON:0007135!1.81e-12!52;UBERON:0000955!7.13e-12!50;UBERON:0006238!7.13e-12!50;UBERON:0002616!1.94e-11!49;UBERON:0003056!3.60e-11!49;UBERON:0002020!4.67e-11!34;UBERON:0002791!7.34e-09!29;UBERON:0003528!7.34e-09!29;UBERON:0001893!7.34e-09!29;UBERON:0000153!1.78e-08!94;UBERON:0003080!8.07e-08!40;UBERON:0002021!9.96e-08!10;UBERON:0000411!9.96e-08!10;UBERON:0001950!9.96e-08!10;UBERON:0002619!1.62e-07!17;UBERON:0002780!2.37e-07!39;UBERON:0001890!2.37e-07!39;UBERON:0006240!2.37e-07!39;UBERON:0007811!4.94e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.73e-30,75;UBERON:0004121,2.07e-29,95;UBERON:0000924,2.07e-29,95;UBERON:0006601,2.07e-29,95;UBERON:0001017,1.06e-27,73;UBERON:0002346,9.84e-24,64;UBERON:0003075,9.84e-24,64;UBERON:0007284,9.84e-24,64;UBERON:0000073,1.74e-23,54;UBERON:0001049,3.68e-21,52;UBERON:0005068,3.68e-21,52;UBERON:0006241,3.68e-21,52;UBERON:0007135,3.68e-21,52;UBERON:0010371,1.33e-20,73;UBERON:0000955,1.37e-17,47;UBERON:0006238,1.37e-17,47;UBERON:0002020,3.29e-17,34;UBERON:0002616,9.04e-17,46;UBERON:0003056,2.27e-16,49;UBERON:0003528,4.94e-14,29;UBERON:0002791,4.94e-14,29;UBERON:0001893,4.94e-14,29;UBERON:0002021,5.05e-14,10;UBERON:0000411,5.05e-14,10;UBERON:0001950,5.05e-14,10;UBERON:0010314,5.11e-14,92;UBERON:0002619,1.12e-12,17;UBERON:0003080,1.65e-12,40;UBERON:0002780,1.29e-11,39;UBERON:0001890,1.29e-11,39;UBERON:0006240,1.29e-11,39;UBERON:0000956,1.87e-11,21;UBERON:0001869,1.87e-11,21;UBERON:0000203,1.87e-11,21;UBERON:0003076,2.78e-10,12;UBERON:0003057,2.78e-10,12;UBERON:0000025,3.83e-07,114
|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,3.64956952390252,0.734187008646726,0,5.01457859675027,2.63623419281366,5.8328969722285,2.09979632438044,0,0,0,0,0.514518872071894,0,0.515672092277442,0.202316460859598,0.528990979272033,0,1.69422266034566,0,0.899899717281399,0.988866362566974,0.7104801149461,2.69640099466564,1.53687322128622,0,0.135005938331691,0,3.71346279724945,2.20868540951614,0.367472397644862,0,0,7.70811166995721,5.49055553766307,4.30098293117482,0.395658863190582,0.274462930807229,1.04182674111352,4.74611098302348,4.50210088025344,5.04234217663473,2.06240009831567,3.13217697758026,0.559198337475902,20.8247031666256,5.7434385681157,0.869593466105033,0,2.03991400112325,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0.970601099684455,0.662524555381181,0.969750506270444,0,1.46390398505774,2.51336048176146,0,0,0,0,3.59497534571574,1.37250180845588,0.502617408451458,8.51739168942155,5.8814555185976,5.194701113989,4.38051410282946,0.305518091550949,0,0,3.36706969418358,0.780722657776222,0.229902104433473,0.900310649026746,1.50704817835715,1.76894897793452,2.43416068541215,2.99845518591132,6.98499100995342,0.215567992932842,0.945530400839096,0.351902248327898,0.657587197282725,0.556094498451196,2.43776516565517,1.02891068203972,0,0,0,0,0,0,0.720248245844059,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,5.46753866266731,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0.494096864172033,0.251335208800269,0.795825888164603,0,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.140271639780637,1.01178459398812,0.885660887877613,0.470996183524124,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,6.10092241953609,5.62616095642575,0.163934945376675,0.504941854408746,0.315508219416257,0.390438744296638,0.861693590931196,1.19484398976276,2.22798674082394,0.566153061577665,3.23848561339915,1.16902343164525,0.395287777946524,1.60660658210904,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0.891844088010353,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.404593039154462,0.247960367176008,0.523511883968059,0.259229946583586,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0.214368379079066,0,3.95326289831947,1.38097570952153,2.29158205375759,2.92150409984269,10.2762377965596,5.2877572817279,6.07520250208625,6.30449684513909,7.70342095273148,6.21312374102184,0.415149390336707,0.399024873401031,0.853668028770671,0.486213434136588,1.46729213839588,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,1.26348605881899,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.631790158511746,0.952587382566147,0.579421629724277,1.73618298417335,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.846984423737976,0.338458431566706,1.09756783723664,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,1.24905288968973,0.935726433781634,0.859484216193193,1.72159498861959,1.10295709559758,0.695603506861264
|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,3.64956952390252,0.734187008646726,0,5.01457859675027,2.63623419281366,5.8328969722285,2.09979632438044,0,0,0,0,0.514518872071894,0,0.515672092277442,0.202316460859598,0.528990979272033,0,1.69422266034566,0,0.899899717281399,0.988866362566974,0.7104801149461,2.69640099466564,1.53687322128622,0,0.135005938331691,0,3.71346279724945,2.20868540951614,0.367472397644862,0,0,7.70811166995721,5.49055553766307,4.30098293117482,0.395658863190582,0.274462930807229,1.04182674111352,4.74611098302348,4.50210088025344,5.04234217663473,2.06240009831567,3.13217697758026,0.559198337475902,20.8247031666256,5.7434385681157,0.869593466105033,0,2.03991400112325,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0.970601099684455,0.662524555381181,0.969750506270444,0,1.46390398505774,2.51336048176146,0,0,0,0,3.59497534571574,1.37250180845588,0.502617408451458,8.51739168942155,5.8814555185976,5.194701113989,4.38051410282946,0.305518091550949,0,0,3.36706969418358,0.780722657776222,0.229902104433473,0.900310649026746,1.50704817835715,1.76894897793452,2.43416068541215,2.99845518591132,6.98499100995342,0.215567992932842,0.945530400839096,0.351902248327898,0.657587197282725,0.556094498451196,2.43776516565517,1.02891068203972,0,0,0,0,0,0,0.720248245844059,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,5.46753866266731,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0.494096864172033,0.251335208800269,0.795825888164603,0,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.140271639780637,1.01178459398812,0.885660887877613,0.470996183524124,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,6.10092241953609,5.62616095642575,0.163934945376675,0.504941854408746,0.315508219416257,0.390438744296638,0.861693590931196,1.19484398976276,2.22798674082394,0.566153061577665,3.23848561339915,1.16902343164525,0.395287777946524,1.60660658210904,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0.891844088010353,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.404593039154462,0.247960367176008,0.523511883968059,0.259229946583586,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0.214368379079066,0,3.95326289831947,1.38097570952153,2.29158205375759,2.92150409984269,10.2762377965596,5.2877572817279,6.07520250208625,6.30449684513909,7.70342095273148,6.21312374102184,0.415149390336707,0.399024873401031,0.853668028770671,0.486213434136588,1.46729213839588,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,1.26348605881899,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.631790158511746,0.952587382566147,0.579421629724277,1.73618298417335,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.846984423737976,0.338458431566706,1.09756783723664,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,1.24905288968973,0.935726433781634,0.859484216193193,1.72159498861959,1.10295709559758,0.695603506861264
|short_description=p3@C1ql3
|short_description=p3@C1ql3
}}
}}

Latest revision as of 17:18, 25 September 2015

Short description:p3@C1ql3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_C1ql3_5end
Coexpression cluster:MCL_coexpression_mm9:1623
Association with transcript: 0bp_to_NM_153155, uc008ijv.1_5end
EntrezGene:C1ql3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@C1ql3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D920.82
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.73e-3075
ectoderm-derived structure2.07e-2995
ectoderm2.07e-2995
presumptive ectoderm2.07e-2995
central nervous system1.06e-2773
neurectoderm9.84e-2464
neural plate9.84e-2464
presumptive neural plate9.84e-2464
regional part of nervous system1.74e-2354
neural tube3.68e-2152
neural rod3.68e-2152
future spinal cord3.68e-2152
neural keel3.68e-2152
ecto-epithelium1.33e-2073
brain1.37e-1747
future brain1.37e-1747
gray matter3.29e-1734
regional part of brain9.04e-1746
pre-chordal neural plate2.27e-1649
brain grey matter4.94e-1429
regional part of telencephalon4.94e-1429
telencephalon4.94e-1429
occipital lobe5.05e-1410
visual cortex5.05e-1410
neocortex5.05e-1410
structure with developmental contribution from neural crest5.11e-1492
regional part of cerebral cortex1.12e-1217
anterior neural tube1.65e-1240
regional part of forebrain1.29e-1139
forebrain1.29e-1139
future forebrain1.29e-1139
cerebral cortex1.87e-1121
cerebral hemisphere1.87e-1121
pallium1.87e-1121
posterior neural tube2.78e-1012
chordal neural plate2.78e-1012
tube3.83e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:12932442..12932491,-&oldid=4204181"