FFCP PHASE1:Mm9::chr4:97248607..97248649,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18027 | |EntrezGene=18027 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1761 | |||
|TSSclassifier=NA | |||
|UniProt=Q02780,Q3UTK6 | |UniProt=Q02780,Q3UTK6 | ||
|association_with_transcript=0bp_to_NM_001122952,uc008tty.2_5end | |association_with_transcript=0bp_to_NM_001122952,uc008tty.2_5end | ||
|cluster_id=chr4:97248607..97248649,+ | |||
|description=CAGE_peak_15_at_Nfia_5end | |description=CAGE_peak_15_at_Nfia_5end | ||
|id=chr4:97248607..97248649,+ | |id=chr4:97248607..97248649,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.76e-15!44;CL:0000133!1.76e-15!44;CL:0002319!1.04e-14!43;CL:0000540!1.07e-13!33;CL:0000047!1.07e-13!33;CL:0000031!1.07e-13!33;CL:0000404!1.07e-13!33;CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000055!8.67e-11!50;CL:0000393!6.64e-10!39;CL:0000211!6.64e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-14,23;CL:0000337,2.83e-14,23;CL:0000221,1.04e-12,44;CL:0000133,1.04e-12,44;CL:0002319,1.01e-11,43;CL:0000540,3.69e-11,33;CL:0000047,3.69e-11,33;CL:0000031,3.69e-11,33;CL:0000404,3.69e-11,33;CL:0002609,2.46e-09,6;CL:0000393,1.24e-08,39;CL:0000211,1.24e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.80e-21!102;UBERON:0000924!3.80e-21!102;UBERON:0006601!3.80e-21!102;UBERON:0000033!3.88e-19!63;UBERON:0001017!1.06e-17!73;UBERON:0005743!1.06e-17!73;UBERON:0000073!2.76e-17!75;UBERON:0001016!2.76e-17!75;UBERON:0007811!9.34e-16!86;UBERON:0000153!4.50e-15!94;UBERON:0002346!5.31e-15!71;UBERON:0003075!5.31e-15!71;UBERON:0007284!5.31e-15!71;UBERON:0003056!1.96e-13!49;UBERON:0001049!2.08e-11!52;UBERON:0005068!2.08e-11!52;UBERON:0006241!2.08e-11!52;UBERON:0007135!2.08e-11!52;UBERON:0000020!2.73e-11!12;UBERON:0001032!2.73e-11!12;UBERON:0004456!2.73e-11!12;UBERON:0000955!3.04e-10!50;UBERON:0006238!3.04e-10!50;UBERON:0001444!8.11e-10!11;UBERON:0002616!1.09e-09!49;UBERON:0000970!3.74e-09!9;UBERON:0000019!3.74e-09!9;UBERON:0000047!3.74e-09!9;UBERON:0004088!3.74e-09!9;UBERON:0002104!3.74e-09!9;UBERON:0001456!3.74e-09!9;UBERON:0003072!3.74e-09!9;UBERON:0003071!3.74e-09!9;UBERON:0004128!3.74e-09!9;UBERON:0005085!1.91e-08!13;UBERON:0003080!2.01e-07!40;UBERON:0002780!2.60e-07!39;UBERON:0001890!2.60e-07!39;UBERON:0006240!2.60e-07!39;UBERON:0002020!4.41e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,8.46e-18,12;UBERON:0001032,8.46e-18,12;UBERON:0004456,8.46e-18,12;UBERON:0000033,3.81e-16,13;UBERON:0000970,3.12e-14,9;UBERON:0000019,3.12e-14,9;UBERON:0000047,3.12e-14,9;UBERON:0010312,3.12e-14,9;UBERON:0004088,3.12e-14,9;UBERON:0002104,3.12e-14,9;UBERON:0001456,3.12e-14,9;UBERON:0003072,3.12e-14,9;UBERON:0004128,3.12e-14,9;UBERON:0003071,3.12e-14,9;UBERON:0005085,5.96e-14,13;UBERON:0001444,2.61e-13,11;UBERON:0004121,7.51e-12,95;UBERON:0000924,7.51e-12,95;UBERON:0006601,7.51e-12,95;UBERON:0002346,2.68e-09,64;UBERON:0003075,2.68e-09,64;UBERON:0007284,2.68e-09,64;UBERON:0010371,4.02e-09,73;UBERON:0003056,9.30e-08,49 | |||
|phase1_expression=10.4096750618116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,0.439372365468944,1.1665793944457,0.55994568650145,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,1.26766280701236,0,0,0,0,0,2.69640099466564,1.53687322128622,10.6800300677732,5.67024940993101,5.8890989178387,0.285650984403804,1.10434270475807,2.08234358665422,3.73797336971122,1.83843757322004,1.10115880999389,0.255374676170375,0.153606533256243,1.84640802822271,2.28719109006024,4.16730696445408,0,0.56276261003168,0.30559649555362,2.06240009831567,2.13557521198654,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0.485300549842228,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.149790639404823,0.457500602818626,0.879580464790051,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,2.31486041475121,2.99277018814219,2.75882525320168,6.12211241338187,11.4535661555143,11.2260223599691,20.6263089658608,18.4592397382666,9.05461797586555,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,2.88132914661996,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0,0,1.33679204449436,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,1.1298205288131,0.649604114888975,1.07416017400489,0.993406773906324,0,0.590758108698309,0.201932899896295,0.304827226619999,0.201652370273681,0.38983152295901,0,0.116876902181569,1.13365191807606,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0.93408612825759,4.78829848081237,3.41467211508268,1.70174701947806,1.25767897576789,0.551530525350042,2.44471400581777,1.85431551515005,0.962757628775446,1.01078884705519,1.2673964994512,1.32038438970253,1.40462261204824,1.02440243847791,1.32101578597911,0,1.15884325944855,0.578727661391115,1.23625770240992,1.03039244094078,2.40008476669791,1.06485483695602,1.66905332963125,1.88950341622027,1.41164070622996,1.60767754994185,1.28049581010941,1.31534855718921,1.35804113845862,1.12228454331548,1.30498519936592,0.689531376628944,0,1.23949472948773,0.964533054905707,3.74715866906919,1.87145286756327,1.07435527024149,0.57386499620653,0.220591419119515,0.463735671240843 | |phase1_expression=10.4096750618116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,0.439372365468944,1.1665793944457,0.55994568650145,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,1.26766280701236,0,0,0,0,0,2.69640099466564,1.53687322128622,10.6800300677732,5.67024940993101,5.8890989178387,0.285650984403804,1.10434270475807,2.08234358665422,3.73797336971122,1.83843757322004,1.10115880999389,0.255374676170375,0.153606533256243,1.84640802822271,2.28719109006024,4.16730696445408,0,0.56276261003168,0.30559649555362,2.06240009831567,2.13557521198654,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0.485300549842228,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.149790639404823,0.457500602818626,0.879580464790051,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,2.31486041475121,2.99277018814219,2.75882525320168,6.12211241338187,11.4535661555143,11.2260223599691,20.6263089658608,18.4592397382666,9.05461797586555,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,2.88132914661996,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0,0,1.33679204449436,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,1.1298205288131,0.649604114888975,1.07416017400489,0.993406773906324,0,0.590758108698309,0.201932899896295,0.304827226619999,0.201652370273681,0.38983152295901,0,0.116876902181569,1.13365191807606,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0.93408612825759,4.78829848081237,3.41467211508268,1.70174701947806,1.25767897576789,0.551530525350042,2.44471400581777,1.85431551515005,0.962757628775446,1.01078884705519,1.2673964994512,1.32038438970253,1.40462261204824,1.02440243847791,1.32101578597911,0,1.15884325944855,0.578727661391115,1.23625770240992,1.03039244094078,2.40008476669791,1.06485483695602,1.66905332963125,1.88950341622027,1.41164070622996,1.60767754994185,1.28049581010941,1.31534855718921,1.35804113845862,1.12228454331548,1.30498519936592,0.689531376628944,0,1.23949472948773,0.964533054905707,3.74715866906919,1.87145286756327,1.07435527024149,0.57386499620653,0.220591419119515,0.463735671240843 | ||
|short_description=p15@Nfia | |short_description=p15@Nfia | ||
}} | }} |
Latest revision as of 07:42, 27 September 2015
Short description: | p15@Nfia |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Nfia_5end |
Coexpression cluster: | MCL_coexpression_mm9:1761 |
Association with transcript: | 0bp_to_NM_001122952, uc008tty.2_5end |
EntrezGene: | Nfia |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.83e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.83e-14 | 23 |
ectodermal cell | 1.04e-12 | 44 |
neurectodermal cell | 1.04e-12 | 44 |
neural cell | 1.01e-11 | 43 |
neuron | 3.69e-11 | 33 |
neuronal stem cell | 3.69e-11 | 33 |
neuroblast | 3.69e-11 | 33 |
electrically signaling cell | 3.69e-11 | 33 |
neuron of cerebral cortex | 2.46e-09 | 6 |
electrically responsive cell | 1.24e-08 | 39 |
electrically active cell | 1.24e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
sense organ | 8.46e-18 | 12 |
sensory system | 8.46e-18 | 12 |
entire sense organ system | 8.46e-18 | 12 |
head | 3.81e-16 | 13 |
eye | 3.12e-14 | 9 |
camera-type eye | 3.12e-14 | 9 |
simple eye | 3.12e-14 | 9 |
immature eye | 3.12e-14 | 9 |
ocular region | 3.12e-14 | 9 |
visual system | 3.12e-14 | 9 |
face | 3.12e-14 | 9 |
optic cup | 3.12e-14 | 9 |
optic vesicle | 3.12e-14 | 9 |
eye primordium | 3.12e-14 | 9 |
ectodermal placode | 5.96e-14 | 13 |
subdivision of head | 2.61e-13 | 11 |
ectoderm-derived structure | 7.51e-12 | 95 |
ectoderm | 7.51e-12 | 95 |
presumptive ectoderm | 7.51e-12 | 95 |
neurectoderm | 2.68e-09 | 64 |
neural plate | 2.68e-09 | 64 |
presumptive neural plate | 2.68e-09 | 64 |
ecto-epithelium | 4.02e-09 | 73 |
pre-chordal neural plate | 9.30e-08 | 49 |