FFCP PHASE1:Mm9::chr12:83498365..83498376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=61 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:83498365..83498376,+ | |||
|description=CAGE_peak_at_chr12:83498365..83498376,+ | |description=CAGE_peak_at_chr12:83498365..83498376,+ | ||
|id=chr12:83498365..83498376,+ | |id=chr12:83498365..83498376,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.68e-08,1;CL:0002078,7.68e-08,1;CL:0000115,7.68e-08,1;CL:0002262,7.68e-08,1;CL:1000398,7.68e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.47e-11!22;UBERON:0007499!8.47e-11!22;UBERON:0006925!8.47e-11!22;UBERON:0009497!8.47e-11!22;UBERON:0000015!8.47e-11!22;UBERON:0002423!8.47e-11!22;UBERON:0006235!8.47e-11!22;UBERON:0008835!8.47e-11!22;UBERON:0003894!8.47e-11!22;UBERON:0004161!8.47e-11!22;UBERON:0008836!8.47e-11!22;UBERON:0009854!3.87e-10!23;UBERON:0009856!3.87e-10!23;UBERON:0005172!8.67e-10!49;UBERON:0005173!8.67e-10!49;UBERON:0002417!8.67e-10!49;UBERON:0000916!8.67e-10!49;UBERON:0002365!5.54e-09!25;UBERON:0002330!5.54e-09!25;UBERON:0005177!1.42e-07!85;UBERON:0004921!2.39e-07!126;UBERON:0004185!2.39e-07!126;UBERON:0001007!4.58e-07!128;UBERON:0001555!4.58e-07!128;UBERON:0007026!4.58e-07!128;UBERON:0009569!5.84e-07!66;UBERON:0004119!8.55e-07!130;UBERON:0000925!8.55e-07!130;UBERON:0006595!8.55e-07!130 | |ontology_enrichment_uberon=UBERON:0002107!8.47e-11!22;UBERON:0007499!8.47e-11!22;UBERON:0006925!8.47e-11!22;UBERON:0009497!8.47e-11!22;UBERON:0000015!8.47e-11!22;UBERON:0002423!8.47e-11!22;UBERON:0006235!8.47e-11!22;UBERON:0008835!8.47e-11!22;UBERON:0003894!8.47e-11!22;UBERON:0004161!8.47e-11!22;UBERON:0008836!8.47e-11!22;UBERON:0009854!3.87e-10!23;UBERON:0009856!3.87e-10!23;UBERON:0005172!8.67e-10!49;UBERON:0005173!8.67e-10!49;UBERON:0002417!8.67e-10!49;UBERON:0000916!8.67e-10!49;UBERON:0002365!5.54e-09!25;UBERON:0002330!5.54e-09!25;UBERON:0005177!1.42e-07!85;UBERON:0004921!2.39e-07!126;UBERON:0004185!2.39e-07!126;UBERON:0001007!4.58e-07!128;UBERON:0001555!4.58e-07!128;UBERON:0007026!4.58e-07!128;UBERON:0009569!5.84e-07!66;UBERON:0004119!8.55e-07!130;UBERON:0000925!8.55e-07!130;UBERON:0006595!8.55e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.62e-08,14;UBERON:0003918,6.62e-08,14;UBERON:0011143,6.62e-08,14;UBERON:0005095,6.62e-08,14;UBERON:0007687,6.62e-08,14;UBERON:0002394,7.68e-08,1;UBERON:0001281,7.68e-08,1;UBERON:0000353,7.68e-08,1;UBERON:0003497,7.68e-08,1;UBERON:0003909,7.68e-08,1;UBERON:0003928,7.68e-08,1;UBERON:0003835,7.68e-08,1;UBERON:0003513,7.68e-08,1;UBERON:0001280,7.68e-08,1;UBERON:0004647,7.68e-08,1;UBERON:0002294,7.68e-08,1;UBERON:0001173,7.68e-08,1;UBERON:0004912,7.68e-08,1;UBERON:0005171,7.68e-08,1;UBERON:0000160,7.99e-08,31 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.38660238396628,0.605050573870028,1.11189021922435,4.75564065281398,0,3.12928013975621,3.77002813200404,4.77495532898762,7.01870713628832,0,0,0,0,0.228497025219458,0,0,0,0.350679099451593,0.948548056863859,1.18088118383682,2.35498091762062,2.22114895059241,0,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0,0,0,1.43768206527355,0.372140947668503,0.936113019343682,1.51547326768267,0.179397413521912,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0,0,0.476872379894642,0,0,0.25384382367503,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.38660238396628,0.605050573870028,1.11189021922435,4.75564065281398,0,3.12928013975621,3.77002813200404,4.77495532898762,7.01870713628832,0,0,0,0,0.228497025219458,0,0,0,0.350679099451593,0.948548056863859,1.18088118383682,2.35498091762062,2.22114895059241,0,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0,0,0,1.43768206527355,0.372140947668503,0.936113019343682,1.51547326768267,0.179397413521912,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0,0,0.476872379894642,0,0,0.25384382367503,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr12:83498365..83498376,+ | |short_description=p@chr12:83498365..83498376,+ | ||
}} | }} |
Latest revision as of 08:42, 5 August 2015
Short description: | p@chr12:83498365..83498376, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:83498365..83498376, + |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.68e-08 | 1 |
meso-epithelial cell | 7.68e-08 | 1 |
endothelial cell | 7.68e-08 | 1 |
endothelial cell of sinusoid | 7.68e-08 | 1 |
endothelial cell of hepatic sinusoid | 7.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 6.62e-08 | 14 |
kidney mesenchyme | 6.62e-08 | 14 |
upper urinary tract | 6.62e-08 | 14 |
kidney rudiment | 6.62e-08 | 14 |
kidney field | 6.62e-08 | 14 |
bile duct | 7.68e-08 | 1 |
hepatic sinusoid | 7.68e-08 | 1 |
parenchyma | 7.68e-08 | 1 |
abdomen blood vessel | 7.68e-08 | 1 |
sinusoid | 7.68e-08 | 1 |
digestive system duct | 7.68e-08 | 1 |
abdominal segment blood vessel | 7.68e-08 | 1 |
trunk blood vessel | 7.68e-08 | 1 |
liver parenchyma | 7.68e-08 | 1 |
liver lobule | 7.68e-08 | 1 |
biliary system | 7.68e-08 | 1 |
biliary tree | 7.68e-08 | 1 |
biliary bud | 7.68e-08 | 1 |
hepatic duct | 7.68e-08 | 1 |
intestine | 7.99e-08 | 31 |