FFCP PHASE1:Mm9::chr3:102824258..102824270,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:102824258..102824270,- | |||
|description=CAGE_peak_at_chr3:102824258..102824270,- | |description=CAGE_peak_at_chr3:102824258..102824270,- | ||
|id=chr3:102824258..102824270,- | |id=chr3:102824258..102824270,- | ||
|ontology_enrichment_celltype=CL:0000063!1.03e-17!66;CL:0000144!3.13e-14!121;CL:0000012!3.13e-14!121;CL:0000988!5.17e-13!32;CL:0002032!5.17e-13!32;CL:0000037!5.17e-13!32;CL:0000566!5.17e-13!32;CL:0000837!5.17e-13!32;CL:0002371!1.12e-12!118;CL:0000548!6.11e-11!115;CL:0000004!6.11e-11!115;CL:0000255!6.11e-11!115;CL:0000034!2.81e-10!97;CL:0002320!5.19e-10!46;CL:0000134!5.19e-10!46;CL:0000542!1.04e-09!13;CL:0000051!1.04e-09!13;CL:0000838!1.19e-09!12;CL:0002031!3.43e-09!25;CL:0000738!6.75e-09!17;CL:0002087!6.75e-09!17;CL:0000084!7.75e-09!11;CL:0000827!7.75e-09!11;CL:0000723!8.79e-09!91;CL:0000048!8.79e-09!91;CL:0000219!2.54e-08!54;CL:0000791!1.75e-07!9;CL:0000789!1.75e-07!9;CL:0002420!1.75e-07!9;CL:0002419!1.75e-07!9;CL:0000790!1.75e-07!9;CL:0002563!9.70e-07!9;CL:0002251!9.70e-07!9 | |ontology_enrichment_celltype=CL:0000063!1.03e-17!66;CL:0000144!3.13e-14!121;CL:0000012!3.13e-14!121;CL:0000988!5.17e-13!32;CL:0002032!5.17e-13!32;CL:0000037!5.17e-13!32;CL:0000566!5.17e-13!32;CL:0000837!5.17e-13!32;CL:0002371!1.12e-12!118;CL:0000548!6.11e-11!115;CL:0000004!6.11e-11!115;CL:0000255!6.11e-11!115;CL:0000034!2.81e-10!97;CL:0002320!5.19e-10!46;CL:0000134!5.19e-10!46;CL:0000542!1.04e-09!13;CL:0000051!1.04e-09!13;CL:0000838!1.19e-09!12;CL:0002031!3.43e-09!25;CL:0000738!6.75e-09!17;CL:0002087!6.75e-09!17;CL:0000084!7.75e-09!11;CL:0000827!7.75e-09!11;CL:0000723!8.79e-09!91;CL:0000048!8.79e-09!91;CL:0000219!2.54e-08!54;CL:0000791!1.75e-07!9;CL:0000789!1.75e-07!9;CL:0002420!1.75e-07!9;CL:0002419!1.75e-07!9;CL:0000790!1.75e-07!9;CL:0002563!9.70e-07!9;CL:0002251!9.70e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.26e-17,12;CL:0000542,1.18e-15,13;CL:0000051,1.18e-15,13;CL:0000988,1.80e-15,32;CL:0002032,1.80e-15,32;CL:0000037,1.80e-15,32;CL:0000837,1.80e-15,32;CL:0000084,1.01e-14,11;CL:0000827,1.01e-14,11;CL:0000738,2.04e-14,17;CL:0002087,2.04e-14,17;CL:0002320,5.52e-13,46;CL:0000134,5.52e-13,46;CL:0002031,4.34e-11,25;CL:0000034,5.99e-11,97;CL:0000723,8.43e-11,91;CL:0000048,8.43e-11,91;CL:0000791,9.76e-11,9;CL:0000789,9.76e-11,9;CL:0002420,9.76e-11,9;CL:0002419,9.76e-11,9;CL:0000790,9.76e-11,9;CL:0000219,1.64e-10,54;CL:0002563,3.18e-10,9;CL:0002251,3.18e-10,9;CL:0002076,5.21e-10,15;CL:0000223,2.85e-09,20;CL:0002250,9.89e-09,3;CL:0000066,9.90e-09,25;CL:0000624,1.29e-08,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-09,3;DOID:4045,1.03e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.19e-10!46;UBERON:0000485!1.71e-07!11;UBERON:0003350!9.70e-07!9;UBERON:0004808!9.70e-07!9;UBERON:0001277!9.70e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.52e-13,46;UBERON:0003350,3.18e-10,9;UBERON:0004808,3.18e-10,9;UBERON:0001277,3.18e-10,9;UBERON:0000485,3.03e-08,11;UBERON:0001242,7.10e-07,13;UBERON:0001262,7.10e-07,13;UBERON:0004786,7.10e-07,13 | |||
|phase1_expression=0.480446541314382,1.74487703819681,0.454999239389536,1.51232105653415,2.50447864973174,0.16787927191189,0.700837921786577,6.84353614240354,0.985521055061667,1.63845168425395,0.34243593645101,0.558405112967355,4.96482116800497,2.53519167015092,0,0.202475267389826,0,0.473193248037357,0.959801035240171,1.27316895539409,0.17008658030214,1.19149141441062,1.30599894569468,0.159992422793407,0.22940928106717,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,0.635030673459631,0.61506478758457,0,3.46621943701529,1.49611180822643,4.08338712524738,13.811543814318,8.5946887897618,17.7998072951091,74.1171674919078,30.7370468231301,16.9928623560904,0.503587271902309,0.608261587317087,0.734187008646726,0,0,0,0.194429899074283,0.279972843250725,0,7.21465206048266,7.25362142011344,4.03312558970957,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,8.69593466105033,0,0,0,0,0,0,0.511290967734173,1.03914401841148,0.35333957451034,0.422530259330042,1.28326477414318,0,0,1.08245520505607,0.760079596425296,0,0.45673551887624,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,1.07833612055328,1.19980546198682,2.1601938602421,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.124406970610093,1.0108910337347,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.556094498451196,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,4.52373851817817,0.54390568381871,0,0,0,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0.42366414172764,0.441056796109924,0.49465875882444,0,0.180938774784468,0,0,0,0,0.170870880797853,0,0,0,0,0,1.5298058699447,0.69975726161829,0.967399816630967,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0.0826534557253359,0,0,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0.350630706544707,0,0,0.0897138566094757,0.503653849092235,0.19318959403219,0,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.480446541314382,1.74487703819681,0.454999239389536,1.51232105653415,2.50447864973174,0.16787927191189,0.700837921786577,6.84353614240354,0.985521055061667,1.63845168425395,0.34243593645101,0.558405112967355,4.96482116800497,2.53519167015092,0,0.202475267389826,0,0.473193248037357,0.959801035240171,1.27316895539409,0.17008658030214,1.19149141441062,1.30599894569468,0.159992422793407,0.22940928106717,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,0.635030673459631,0.61506478758457,0,3.46621943701529,1.49611180822643,4.08338712524738,13.811543814318,8.5946887897618,17.7998072951091,74.1171674919078,30.7370468231301,16.9928623560904,0.503587271902309,0.608261587317087,0.734187008646726,0,0,0,0.194429899074283,0.279972843250725,0,7.21465206048266,7.25362142011344,4.03312558970957,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,8.69593466105033,0,0,0,0,0,0,0.511290967734173,1.03914401841148,0.35333957451034,0.422530259330042,1.28326477414318,0,0,1.08245520505607,0.760079596425296,0,0.45673551887624,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,1.07833612055328,1.19980546198682,2.1601938602421,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.124406970610093,1.0108910337347,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.556094498451196,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,4.52373851817817,0.54390568381871,0,0,0,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0.42366414172764,0.441056796109924,0.49465875882444,0,0.180938774784468,0,0,0,0,0.170870880797853,0,0,0,0,0,1.5298058699447,0.69975726161829,0.967399816630967,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0.0826534557253359,0,0,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0.350630706544707,0,0,0.0897138566094757,0.503653849092235,0.19318959403219,0,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr3:102824258..102824270,- | |short_description=p@chr3:102824258..102824270,- | ||
}} | }} |
Latest revision as of 18:12, 5 August 2015
Short description: | p@chr3:102824258..102824270, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:102824258..102824270, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.26e-17 | 12 |
lymphocyte | 1.18e-15 | 13 |
common lymphoid progenitor | 1.18e-15 | 13 |
hematopoietic cell | 1.80e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.80e-15 | 32 |
hematopoietic stem cell | 1.80e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.80e-15 | 32 |
T cell | 1.01e-14 | 11 |
pro-T cell | 1.01e-14 | 11 |
leukocyte | 2.04e-14 | 17 |
nongranular leukocyte | 2.04e-14 | 17 |
connective tissue cell | 5.52e-13 | 46 |
mesenchymal cell | 5.52e-13 | 46 |
hematopoietic lineage restricted progenitor cell | 4.34e-11 | 25 |
stem cell | 5.99e-11 | 97 |
somatic stem cell | 8.43e-11 | 91 |
multi fate stem cell | 8.43e-11 | 91 |
mature alpha-beta T cell | 9.76e-11 | 9 |
alpha-beta T cell | 9.76e-11 | 9 |
immature T cell | 9.76e-11 | 9 |
mature T cell | 9.76e-11 | 9 |
immature alpha-beta T cell | 9.76e-11 | 9 |
motile cell | 1.64e-10 | 54 |
intestinal epithelial cell | 3.18e-10 | 9 |
epithelial cell of alimentary canal | 3.18e-10 | 9 |
endo-epithelial cell | 5.21e-10 | 15 |
endodermal cell | 2.85e-09 | 20 |
intestinal crypt stem cell | 9.89e-09 | 3 |
epithelial cell | 9.90e-09 | 25 |
CD4-positive, alpha-beta T cell | 1.29e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.52e-13 | 46 |
epithelium of mucosa | 3.18e-10 | 9 |
gastrointestinal system epithelium | 3.18e-10 | 9 |
intestinal epithelium | 3.18e-10 | 9 |
simple columnar epithelium | 3.03e-08 | 11 |
intestinal mucosa | 7.10e-07 | 13 |
wall of intestine | 7.10e-07 | 13 |
gastrointestinal system mucosa | 7.10e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.03e-09 | 3 |
muscle cancer | 1.03e-09 | 3 |