FFCP PHASE1:Mm9::chr4:132350889..132350903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:132350889..132350903,+ | |||
|description=CAGE_peak_at_chr4:132350889..132350903,+ | |description=CAGE_peak_at_chr4:132350889..132350903,+ | ||
|id=chr4:132350889..132350903,+ | |id=chr4:132350889..132350903,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.33e-09!6;CL:0000556!1.33e-09!6;CL:0000049!5.74e-08!19;CL:0000414!1.02e-07!11;CL:0000988!3.77e-07!32;CL:0002032!3.77e-07!32;CL:0000037!3.77e-07!32;CL:0000566!3.77e-07!32;CL:0000837!3.77e-07!32;CL:0002320!6.70e-07!46;CL:0000134!6.70e-07!46 | |ontology_enrichment_celltype=CL:0000553!1.33e-09!6;CL:0000556!1.33e-09!6;CL:0000049!5.74e-08!19;CL:0000414!1.02e-07!11;CL:0000988!3.77e-07!32;CL:0002032!3.77e-07!32;CL:0000037!3.77e-07!32;CL:0000566!3.77e-07!32;CL:0000837!3.77e-07!32;CL:0002320!6.70e-07!46;CL:0000134!6.70e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.83e-13,6;CL:0000556,1.83e-13,6;CL:0000945,2.48e-10,1;CL:0000236,2.48e-10,1;CL:0000826,2.48e-10,1;CL:0000355,2.49e-09,9;CL:0000050,3.45e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.99e-11!3;DOID:4045!1.99e-11!3 | |ontology_enrichment_disease=DOID:0060100!1.99e-11!3;DOID:4045!1.99e-11!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.28e-26,3;DOID:4045,1.28e-26,3;DOID:0050686,1.11e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002465!2.16e-10!3;UBERON:0002193!3.97e-09!48;UBERON:0002204!1.99e-07!32;UBERON:0001962!2.45e-07!2;UBERON:0001961!2.45e-07!2;UBERON:0001744!2.45e-07!2;UBERON:0002371!2.77e-07!16;UBERON:0002384!6.70e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.31e-09,32;UBERON:0001134,2.49e-09,9;UBERON:0002036,2.49e-09,9;UBERON:0002385,2.49e-09,9;UBERON:0000486,2.49e-09,9;UBERON:0007503,2.49e-09,9;UBERON:0001015,2.49e-09,9;UBERON:0002329,2.49e-09,9;UBERON:0003082,2.49e-09,9;UBERON:0003059,2.49e-09,9;UBERON:0007282,2.49e-09,9;UBERON:0004290,2.49e-09,9;UBERON:0009618,2.49e-09,9;UBERON:0000383,1.86e-08,10;UBERON:0007524,9.72e-08,11;UBERON:0003077,9.72e-08,11;UBERON:0007285,9.72e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.999329285446988,0,0,3.15462165358238,2.4680598049033,1.27316895539409,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,2.09409497589519,21.1763335691165,16.3930916390027,4.36959317728038,0,0,0,0,0,0,0,0,0,9.89917375740644,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.999329285446988,0,0,3.15462165358238,2.4680598049033,1.27316895539409,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,2.09409497589519,21.1763335691165,16.3930916390027,4.36959317728038,0,0,0,0,0,0,0,0,0,9.89917375740644,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:132350889..132350903,+ | |short_description=p@chr4:132350889..132350903,+ | ||
}} | }} |
Latest revision as of 21:13, 4 August 2015
Short description: | p@chr4:132350889..132350903, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:132350889..132350903, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.83e-13 | 6 |
megakaryocyte | 1.83e-13 | 6 |
lymphocyte of B lineage | 2.48e-10 | 1 |
B cell | 2.48e-10 | 1 |
pro-B cell | 2.48e-10 | 1 |
multi-potent skeletal muscle stem cell | 2.49e-09 | 9 |
megakaryocyte-erythroid progenitor cell | 3.45e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.31e-09 | 32 |
skeletal muscle tissue | 2.49e-09 | 9 |
striated muscle tissue | 2.49e-09 | 9 |
muscle tissue | 2.49e-09 | 9 |
multilaminar epithelium | 2.49e-09 | 9 |
epithelial vesicle | 2.49e-09 | 9 |
musculature | 2.49e-09 | 9 |
somite | 2.49e-09 | 9 |
myotome | 2.49e-09 | 9 |
presomitic mesoderm | 2.49e-09 | 9 |
presumptive segmental plate | 2.49e-09 | 9 |
dermomyotome | 2.49e-09 | 9 |
trunk paraxial mesoderm | 2.49e-09 | 9 |
musculature of body | 1.86e-08 | 10 |
dense mesenchyme tissue | 9.72e-08 | 11 |
paraxial mesoderm | 9.72e-08 | 11 |
presumptive paraxial mesoderm | 9.72e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.28e-26 | 3 |
muscle cancer | 1.28e-26 | 3 |
organ system cancer | 1.11e-13 | 6 |