FFCP PHASE1:Mm9::chr6:70009225..70009230,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=226 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENSMUST00000103376_5end | |association_with_transcript=-32bp_to_ENSMUST00000103376_5end | ||
|cluster_id=chr6:70009225..70009230,- | |||
|description=CAGE_peak_1_at_ENSMUST00000103376_5end | |description=CAGE_peak_1_at_ENSMUST00000103376_5end | ||
|id=chr6:70009225..70009230,- | |id=chr6:70009225..70009230,- | ||
|ontology_enrichment_celltype=CL:0000553!8.17e-16!6;CL:0000556!8.17e-16!6;CL:0000050!2.85e-10!9;CL:0002027!9.62e-09!3;CL:0002006!9.62e-09!3;CL:0002024!9.62e-09!3;CL:0000414!2.97e-08!11;CL:0000839!7.38e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.43e-31,6;CL:0000556,2.43e-31,6;CL:0000050,8.38e-21,9;CL:0002027,1.52e-16,3;CL:0002006,1.52e-16,3;CL:0002024,1.52e-16,3;CL:0000839,2.69e-14,13;CL:0000763,1.52e-11,16;CL:0000049,1.18e-09,19;CL:0002031,1.32e-09,25;CL:0000988,2.37e-07,32;CL:0002032,2.37e-07,32;CL:0000037,2.37e-07,32;CL:0000837,2.37e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.34e-12!48;UBERON:0002405!2.05e-09!70;UBERON:0002390!6.94e-09!45;UBERON:0003061!6.94e-09!45;UBERON:0007023!9.47e-09!51;UBERON:0002465!1.52e-08!3;UBERON:0002371!3.67e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.97e-16,3;UBERON:0002371,1.52e-11,16;UBERON:0001962,3.42e-11,2;UBERON:0001961,3.42e-11,2;UBERON:0001744,3.42e-11,2;UBERON:0002193,1.13e-09,48;UBERON:0002405,1.13e-09,48;UBERON:0001474,2.79e-08,22;UBERON:0004765,2.79e-08,22;UBERON:0001434,2.79e-08,22;UBERON:0001153,5.73e-07,1;UBERON:0001045,5.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66420737997229,8.50396123037269,4.89693314689703,5.8360500591274,3.01651753932625,6.79023442876848,0.850432901510698,0,0,4.47978783821539,3.21172993494038,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.94112595522402,5.17875767294343,5.93768556259299,0,0,0,0,0,0,0,0,0,0,0,0,82.0123749359738,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96675849995316,0,0,0,0,0,0,0,0,0,0,0,0,0,6.17337947088538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0,0,7.00570611271196,0,0,0.188368457004691,0.820165366326151,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66420737997229,8.50396123037269,4.89693314689703,5.8360500591274,3.01651753932625,6.79023442876848,0.850432901510698,0,0,4.47978783821539,3.21172993494038,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.94112595522402,5.17875767294343,5.93768556259299,0,0,0,0,0,0,0,0,0,0,0,0,82.0123749359738,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96675849995316,0,0,0,0,0,0,0,0,0,0,0,0,0,6.17337947088538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0,0,7.00570611271196,0,0,0.188368457004691,0.820165366326151,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000103376 | |short_description=p1@ENSMUST00000103376 | ||
}} | }} |
Latest revision as of 01:34, 6 August 2015
Short description: | p1@ENSMUST00000103376 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103376_5end |
Coexpression cluster: | MCL_coexpression_mm9:226 |
Association with transcript: | -32bp_to_ENSMUST00000103376_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.43e-31 | 6 |
megakaryocyte | 2.43e-31 | 6 |
megakaryocyte-erythroid progenitor cell | 8.38e-21 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.52e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.52e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.52e-16 | 3 |
myeloid lineage restricted progenitor cell | 2.69e-14 | 13 |
myeloid cell | 1.52e-11 | 16 |
common myeloid progenitor | 1.18e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 1.32e-09 | 25 |
hematopoietic cell | 2.37e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.37e-07 | 32 |
hematopoietic stem cell | 2.37e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.37e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.97e-16 | 3 |
bone marrow | 1.52e-11 | 16 |
gut-associated lymphoid tissue | 3.42e-11 | 2 |
mucosa-associated lymphoid tissue | 3.42e-11 | 2 |
lymphoid tissue | 3.42e-11 | 2 |
hemolymphoid system | 1.13e-09 | 48 |
immune system | 1.13e-09 | 48 |
bone element | 2.79e-08 | 22 |
skeletal element | 2.79e-08 | 22 |
skeletal system | 2.79e-08 | 22 |
caecum | 5.73e-07 | 1 |
midgut | 5.73e-07 | 1 |