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FFCP PHASE1:Mm9::chr4:150288693..150288710,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21942
|EntrezGene=21942
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=A2A887
|UniProt=A2A887
|association_with_transcript=22bp_to_ENSMUST00000135169_5end
|association_with_transcript=22bp_to_ENSMUST00000135169_5end
|cluster_id=chr4:150288693..150288710,+
|description=CAGE_peak_3_at_Tnfrsf9_5end
|description=CAGE_peak_3_at_Tnfrsf9_5end
|id=chr4:150288693..150288710,+
|id=chr4:150288693..150288710,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000624,7.79e-08,8;CL:0000791,7.91e-07,9;CL:0000789,7.91e-07,9;CL:0002420,7.91e-07,9;CL:0002419,7.91e-07,9;CL:0000790,7.91e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.04e-09!94;UBERON:0007811!6.14e-08!86
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0.640595388419176,0,0,0.60492842261366,1.00179145989269,0.16787927191189,0.700837921786577,4.13194635013044,7.03943610758334,5.61754863172784,5.47897498321616,2.95156988282745,0.171200729931206,0.874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.685572168028694,0.42438965179803,0.850432901510698,0.297872853602656,0.783599367416806,0.319984845586813,1.37645568640302,0,0,0,0.570070258369122,0.756090389279792,1.77384408524244,0.635030673459631,1.84519436275371,0,1.1554064790051,0,0.408338712524738,1.25559489221072,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.377690453926732,0.709638518536602,0.734187008646726,3.9119567217402,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0.671130424230945,2.17608642603403,0.336093799142464,0,0.286533439938757,0,1.01158230429799,0,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.810035629990144,1.05162480675691,0,0.220868540951614,0.367472397644862,0.862609239164127,1.83843757322004,0,0.383062014255563,0.307213066512487,0.791317726381163,0.823388792421687,0.52091337055676,0.279182999001381,1.12552522006336,0.15279824777681,0.883885756421003,0.142371680799103,1.3047961207771,0.151452386666368,0,0,0,1.3599426674155,0,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,0.45673551887624,0.776813650941515,0.29688427812965,0.867426633830679,0.913396434936424,1.15307748628029,0.753613202763113,0.23517741427141,0.376999773989026,0.988779870937496,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,1.17112318804619,1.04723353406728,0,0.479260498023681,1.19980546198682,0.635351135365324,0.299581278809645,0.915001205637253,1.00523481690292,1.04294592115366,0.511430914660661,0.20778804455956,1.78465389374533,0.101839363850316,0.373220911830279,0.505445516867349,0.631325567659422,0.650602214813519,1.14951052216736,1.0803727788321,0.30140963567143,0.748401490664606,1.0249097622788,1.21812241927647,1.03481348295606,0.646703978798527,1.13463648100692,1.58356011747554,1.09597866213787,0.278047249225598,2.089512999133,0.61734640922383,0.59710280045548,2.1066395619397,0.51469581422943,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0,0.233530684734339,0.822799249567402,0.164167464079095,0.162137619091711,0.730999937126662,0.219550115291051,0.402619256281115,1.26173969138476,0.411618449517138,0.660837565967596,0.264450566663544,0.213288250535234,0.928946687441754,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.974820435595601,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,0.571242563048644,1.1270773567308,0.814605311381257,0.193952487167626,0.350679099451593,0.316182685621286,0.442830443938806,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0,0,1.43768206527355,0,0.624075346229121,0.505157755894224,0.179397413521912,0,0.184753190166605,0.568474235311454,0.162964976442026,0.339490171550376,0.704070744865506,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0,0.318909537314974,0.163863314715738,1.20879487306127,0.867894351489069,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,1.78238939265915,1.69845918473299,1.61924280669958,0.584511715822624,0.395287777946524,0.963963949265421,0.425820255624806,0,0.488660878060728,0.989820737835213,1.32745138339963,0.485561272309963,0.906970670894253,0,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0,0,0,0,1.36175842301515,1.08036656418786,1.29358683782755,0.643011105094777,0.532020700926821,0.178368817602071,0.329098041204242,1.2178597964584,0.938686832254841,1.90648863777438,0.441056796109924,0.65954501176592,0.484393280087717,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.555583582109135,0,0.27338845544205,0.228778173206523,2.37969801991397,1.53946597556024,1.52019971184866,0,0.632671987162271,0,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0.675824501963113,0.234714477291508,0.39061315453185,0.629156066554265,0.966336483304024,0.864090018773596,0.316011120628178,0.608175645870493,0.616265742988964,0.77952493786677,0.537080087002444,0.79472541912506,0.360586348559907,0.443068581523732,1.11063094942962,0.381034033274999,0.705783295957884,0.487289403698762,1.44317762460494,1.28564592399726,0.453460767230423,0,0.358855426437903,0.503653849092235,0.19318959403219,0.563047426353546,0.183151624267265,0.214368379079066,0,0.564751842617067,1.38097570952153,0,0.859265911718438,0.685082519770642,1.5107877947794,0,1.80128481289688,0.906284817968409,1.03552062350364,0.62272408550506,1.19707462020309,0.170733605754134,0.972426868273176,0,0.919217542250071,0,0.206035057238894,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.543216455383447,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.771626443924566,0.249810577937946,0.467863216890817,0.644613162144895,0,0.220591419119515,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0.60492842261366,1.00179145989269,0.16787927191189,0.700837921786577,4.13194635013044,7.03943610758334,5.61754863172784,5.47897498321616,2.95156988282745,0.171200729931206,0.874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.685572168028694,0.42438965179803,0.850432901510698,0.297872853602656,0.783599367416806,0.319984845586813,1.37645568640302,0,0,0,0.570070258369122,0.756090389279792,1.77384408524244,0.635030673459631,1.84519436275371,0,1.1554064790051,0,0.408338712524738,1.25559489221072,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.377690453926732,0.709638518536602,0.734187008646726,3.9119567217402,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0.671130424230945,2.17608642603403,0.336093799142464,0,0.286533439938757,0,1.01158230429799,0,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.810035629990144,1.05162480675691,0,0.220868540951614,0.367472397644862,0.862609239164127,1.83843757322004,0,0.383062014255563,0.307213066512487,0.791317726381163,0.823388792421687,0.52091337055676,0.279182999001381,1.12552522006336,0.15279824777681,0.883885756421003,0.142371680799103,1.3047961207771,0.151452386666368,0,0,0,1.3599426674155,0,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,0.45673551887624,0.776813650941515,0.29688427812965,0.867426633830679,0.913396434936424,1.15307748628029,0.753613202763113,0.23517741427141,0.376999773989026,0.988779870937496,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,1.17112318804619,1.04723353406728,0,0.479260498023681,1.19980546198682,0.635351135365324,0.299581278809645,0.915001205637253,1.00523481690292,1.04294592115366,0.511430914660661,0.20778804455956,1.78465389374533,0.101839363850316,0.373220911830279,0.505445516867349,0.631325567659422,0.650602214813519,1.14951052216736,1.0803727788321,0.30140963567143,0.748401490664606,1.0249097622788,1.21812241927647,1.03481348295606,0.646703978798527,1.13463648100692,1.58356011747554,1.09597866213787,0.278047249225598,2.089512999133,0.61734640922383,0.59710280045548,2.1066395619397,0.51469581422943,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0,0.233530684734339,0.822799249567402,0.164167464079095,0.162137619091711,0.730999937126662,0.219550115291051,0.402619256281115,1.26173969138476,0.411618449517138,0.660837565967596,0.264450566663544,0.213288250535234,0.928946687441754,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.974820435595601,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,0.571242563048644,1.1270773567308,0.814605311381257,0.193952487167626,0.350679099451593,0.316182685621286,0.442830443938806,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0,0,1.43768206527355,0,0.624075346229121,0.505157755894224,0.179397413521912,0,0.184753190166605,0.568474235311454,0.162964976442026,0.339490171550376,0.704070744865506,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0,0.318909537314974,0.163863314715738,1.20879487306127,0.867894351489069,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,1.78238939265915,1.69845918473299,1.61924280669958,0.584511715822624,0.395287777946524,0.963963949265421,0.425820255624806,0,0.488660878060728,0.989820737835213,1.32745138339963,0.485561272309963,0.906970670894253,0,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0,0,0,0,1.36175842301515,1.08036656418786,1.29358683782755,0.643011105094777,0.532020700926821,0.178368817602071,0.329098041204242,1.2178597964584,0.938686832254841,1.90648863777438,0.441056796109924,0.65954501176592,0.484393280087717,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.555583582109135,0,0.27338845544205,0.228778173206523,2.37969801991397,1.53946597556024,1.52019971184866,0,0.632671987162271,0,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0.675824501963113,0.234714477291508,0.39061315453185,0.629156066554265,0.966336483304024,0.864090018773596,0.316011120628178,0.608175645870493,0.616265742988964,0.77952493786677,0.537080087002444,0.79472541912506,0.360586348559907,0.443068581523732,1.11063094942962,0.381034033274999,0.705783295957884,0.487289403698762,1.44317762460494,1.28564592399726,0.453460767230423,0,0.358855426437903,0.503653849092235,0.19318959403219,0.563047426353546,0.18315162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|short_description=p3@Tnfrsf9
|short_description=p3@Tnfrsf9
}}
}}

Latest revision as of 18:31, 26 September 2015

Short description:p3@Tnfrsf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tnfrsf9_5end
Coexpression cluster:NA
Association with transcript: 22bp_to_ENSMUST00000135169_5end
EntrezGene:Tnfrsf9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tnfrsf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell7.79e-088
mature alpha-beta T cell7.91e-079
alpha-beta T cell7.91e-079
immature T cell7.91e-079
mature T cell7.91e-079
immature alpha-beta T cell7.91e-079
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