FFCP PHASE1:Mm9::chr15:102767273..102767285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15421 | |EntrezGene=15421 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1653 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K5B8 | |UniProt=Q8K5B8 | ||
|association_with_transcript=0bp_to_NM_010463,uc007xww.1_5end | |association_with_transcript=0bp_to_NM_010463,uc007xww.1_5end | ||
|cluster_id=chr15:102767273..102767285,+ | |||
|description=CAGE_peak_2_at_Hoxc12_5end | |description=CAGE_peak_2_at_Hoxc12_5end | ||
|id=chr15:102767273..102767285,+ | |id=chr15:102767273..102767285,+ | ||
|ontology_enrichment_celltype=CL:0002612!1.15e-07!3 | |ontology_enrichment_celltype=CL:0002612!1.15e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.22e-20,3;CL:0002611,1.95e-13,2;CL:0000117,5.17e-07,23;CL:0000337,5.17e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!3.27e-13!6;UBERON:0005174!3.27e-13!6;UBERON:0001137!3.27e-13!6;UBERON:0002102!5.80e-12!8;UBERON:0004710!5.80e-12!8;UBERON:0005419!5.80e-12!8;UBERON:0005417!5.80e-12!8;UBERON:0005729!5.80e-12!8;UBERON:0001948!2.04e-11!5;UBERON:0002315!2.04e-11!5;UBERON:0002257!1.15e-07!3;UBERON:0000026!7.01e-07!13;UBERON:0004708!7.01e-07!13;UBERON:0002101!7.01e-07!13;UBERON:0004357!7.01e-07!13;UBERON:0009872!7.01e-07!13;UBERON:0004347!7.01e-07!13;UBERON:0005732!7.01e-07!13;UBERON:0005733!7.01e-07!13 | |ontology_enrichment_uberon=UBERON:0002240!3.27e-13!6;UBERON:0005174!3.27e-13!6;UBERON:0001137!3.27e-13!6;UBERON:0002102!5.80e-12!8;UBERON:0004710!5.80e-12!8;UBERON:0005419!5.80e-12!8;UBERON:0005417!5.80e-12!8;UBERON:0005729!5.80e-12!8;UBERON:0001948!2.04e-11!5;UBERON:0002315!2.04e-11!5;UBERON:0002257!1.15e-07!3;UBERON:0000026!7.01e-07!13;UBERON:0004708!7.01e-07!13;UBERON:0002101!7.01e-07!13;UBERON:0004357!7.01e-07!13;UBERON:0009872!7.01e-07!13;UBERON:0004347!7.01e-07!13;UBERON:0005732!7.01e-07!13;UBERON:0005733!7.01e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.77e-38,6;UBERON:0005174,4.77e-38,6;UBERON:0001137,4.77e-38,6;UBERON:0001948,2.16e-32,5;UBERON:0002315,2.16e-32,5;UBERON:0002257,1.22e-20,3;UBERON:0003076,6.08e-19,12;UBERON:0003057,6.08e-19,12;UBERON:0002102,1.42e-14,7;UBERON:0004710,1.42e-14,7;UBERON:0005419,1.42e-14,7;UBERON:0005417,1.42e-14,7;UBERON:0005729,1.42e-14,7;UBERON:0002256,1.95e-13,2;UBERON:0010708,8.65e-13,8;UBERON:0000489,1.05e-10,21;UBERON:0000026,1.32e-08,12;UBERON:0004708,1.32e-08,12;UBERON:0002101,1.32e-08,12;UBERON:0004357,1.32e-08,12;UBERON:0004347,1.32e-08,12;UBERON:0005732,1.32e-08,12;UBERON:0005733,1.32e-08,12;UBERON:0010707,5.83e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,4.28476476605705,1.10434270475807,0,0,0,0,0,0,0,0,0,0,0,0,8.2496003932627,11.3897344639282,7.08317894136142,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.945530400839096,1.58356011747554,0.657587197282725,1.39023624612799,1.74126083261083,1.85203922767149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301564624640779,0.358117032009409,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,3.19219898720825,2.04880326904961,0.243106717068294,1.46729213839588,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0,0.187283014939765,0.448176066834085,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0,0.423073039458382,0.365855945745545,0,0.543216455383447,0,0.237270036248348,0,0.409231043169689,0.154936841185966,1.15743966588685,0,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,4.28476476605705,1.10434270475807,0,0,0,0,0,0,0,0,0,0,0,0,8.2496003932627,11.3897344639282,7.08317894136142,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.945530400839096,1.58356011747554,0.657587197282725,1.39023624612799,1.74126083261083,1.85203922767149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301564624640779,0.358117032009409,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,3.19219898720825,2.04880326904961,0.243106717068294,1.46729213839588,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0,0.187283014939765,0.448176066834085,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0,0.423073039458382,0.365855945745545,0,0.543216455383447,0,0.237270036248348,0,0.409231043169689,0.154936841185966,1.15743966588685,0,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Hoxc12 | |short_description=p2@Hoxc12 | ||
}} | }} |
Latest revision as of 14:42, 26 September 2015
Short description: | p2@Hoxc12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxc12_5end |
Coexpression cluster: | MCL_coexpression_mm9:1653 |
Association with transcript: | 0bp_to_NM_010463, uc007xww.1_5end |
EntrezGene: | Hoxc12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.22e-20 | 3 |
neuron of the dorsal spinal cord | 1.95e-13 | 2 |
CNS neuron (sensu Vertebrata) | 5.17e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.17e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.77e-38 | 6 |
dorsal region element | 4.77e-38 | 6 |
dorsum | 4.77e-38 | 6 |
regional part of spinal cord | 2.16e-32 | 5 |
gray matter of spinal cord | 2.16e-32 | 5 |
ventral horn of spinal cord | 1.22e-20 | 3 |
posterior neural tube | 6.08e-19 | 12 |
chordal neural plate | 6.08e-19 | 12 |
forelimb | 1.42e-14 | 7 |
pectoral appendage | 1.42e-14 | 7 |
pectoral appendage bud | 1.42e-14 | 7 |
forelimb bud | 1.42e-14 | 7 |
forelimb/pectoral fin field | 1.42e-14 | 7 |
dorsal horn of spinal cord | 1.95e-13 | 2 |
pectoral complex | 8.65e-13 | 8 |
cavitated compound organ | 1.05e-10 | 21 |
appendage | 1.32e-08 | 12 |
paired limb/fin | 1.32e-08 | 12 |
limb | 1.32e-08 | 12 |
paired limb/fin bud | 1.32e-08 | 12 |
limb bud | 1.32e-08 | 12 |
limb/fin field | 1.32e-08 | 12 |
limb field | 1.32e-08 | 12 |
appendage girdle complex | 5.83e-08 | 13 |