Personal tools

FFCP PHASE1:Mm9::chr7:13615857..13615886,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21849
|EntrezGene=21849
|HGNC=
|HGNC=
|MCL_coexpression_id=62
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=136bp_to_ENSMUST00000123778_5end
|association_with_transcript=136bp_to_ENSMUST00000123778_5end
|cluster_id=chr7:13615857..13615886,+
|description=CAGE_peak_4_at_Trim28_5end
|description=CAGE_peak_4_at_Trim28_5end
|id=chr7:13615857..13615886,+
|id=chr7:13615857..13615886,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.75e-10!193;UBERON:0004120!1.75e-10!193;UBERON:0006603!1.75e-10!193;UBERON:0001048!6.54e-09!147;UBERON:0005156!3.55e-08!26;UBERON:0000990!3.55e-08!26;UBERON:0003133!1.48e-07!24;UBERON:0000466!2.53e-07!79;UBERON:0000077!4.68e-07!97;UBERON:0004119!6.63e-07!130;UBERON:0000925!6.63e-07!130;UBERON:0006595!6.63e-07!130;UBERON:0004921!7.19e-07!126;UBERON:0004185!7.19e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.25e-09,26;UBERON:0000990,1.25e-09,26;UBERON:0003133,7.54e-09,24;UBERON:0000926,6.38e-08,120;UBERON:0004120,6.38e-08,120;UBERON:0006603,6.38e-08,120;UBERON:0001048,1.48e-07,134;UBERON:0000991,2.35e-07,18;UBERON:0005564,2.35e-07,18;UBERON:0002553,2.88e-07,39;UBERON:0003886,3.90e-07,38;UBERON:0002323,6.22e-07,37;UBERON:0004458,6.22e-07,37
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,1.267098499365,0.70219357896598,0.171217968225505,0.638177271962691,0,0.262261207256992,0,0.607425802169478,1.39912375625629,0.157731082679119,0.274228867211478,0,2.21112554392781,0.496454756004426,0.261199789138935,0.47997726838022,0,0,0,0.430942465371778,0.380046838912748,0,0,0.635030673459631,1.23012957516914,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,2.51793635951155,1.11514624341466,1.46837401729345,1.56478268869608,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.202316460859598,1.5869729378161,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,3.5524005747305,1.19840044207362,2.68952813725088,0.518448061542388,0.405017814995072,0.630974884054146,0.571301968807607,0.441737081903227,1.10241719293459,0.191690942036473,0,0,0,0,0.527545150920775,0.640413505216868,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0,0.372798891650601,0.227178579999552,0.151143120213571,0.579728977403356,0,5.439770669662,1.07940638327563,0,0.896053774194671,1.40444420131752,0.170430322578058,0.259786004602869,0,0.14084341977668,0,2.54805239706646,0,0.649473123033642,1.77351905832569,1.01104889002957,1.94112595522402,0.258937883647172,0.148442139064825,1.90833859442749,0.608930956624282,1.15307748628029,0.452167921657868,1.88141931417128,0.502666365318702,3.21353458054686,0.722996784599558,5.30766331169925,0,1.32504911076236,0,3.72783522436244,0,11.51956887474,7.40825460104915,0.11981512450592,0.599902730993408,0,0.599162557619291,0,2.01046963380583,0.347648640384553,0,0,0.324482526135515,1.52759045775474,1.36847667671102,1.51633655060205,0.210441855886474,6.8963834770233,0.459804208866946,0.900310649026746,0.452114453507145,1.63287597963187,0.768682321709099,0.281105173679186,0.517406741478031,7.97601573851516,7.18603104637713,4.04687585577082,6.35667624039967,2.22437799380478,1.0447564995665,0.823128545631774,5.57295947091781,0,0,0.284163499395593,1.44988040774851,1.17263029990548,0.180062061461015,1.65721314909647,0.196764231747404,0.154267112887378,0,0.536546802799238,1.05088808130453,0.493679549740441,0.492502392237286,0.56748166682099,0.292399974850665,0.219550115291051,0.268412837520744,0,0.823236899034275,0.660837565967596,1.85115396664481,2.77274725695804,0.696710015581316,0.644337306610467,1.4117846723634,0.667134131534611,0.951128130562796,5.69434873853414,1.64698954724011,0.754005626400808,1.59165177632921,1.16978452271472,7.19055526923377,3.6743468478698,2.58883655230677,13.0870851657626,0.685491075658373,2.25415471346161,1.01825663922657,0.969762435838129,1.61312385747733,0.442655759869801,0,0.156998727841375,0.493588655687202,1.1858105083486,2.16898637430922,2.75182593158484,0.674586337154561,1.01430060694251,2.65294875727659,1.01850340712568,2.87696137450811,23.5096078823801,2.19649130550465,2.87536413054709,3.34926852901653,0,0.757736633841335,0.896987067609561,3.37710464954357,1.84753190166605,0.568474235311454,1.30371981153621,0.169745085775188,0.938760993154008,0.837531287209079,0.952174563544055,1.17080188714679,0.630540576424764,0.8858587585951,0.637819074629948,0.655453258862952,0.518054945597687,0.723245292907558,4.52373851817817,1.08781136763742,1.47529281905711,1.65562047782839,0,0,0.819674726883377,1.26235463602186,0.94652465824877,1.56175497718655,0.861693590931196,1.19484398976276,1.33679204449436,0.283076530788832,2.02405350837447,2.92255857911312,0.790575555893047,0,2.41298144854057,4.27357448801413,1.14020871547503,2.8044920905331,0,1.94224508923985,0.906970670894253,0.754420319023592,1.18120757152309,0,0.258428293168221,2.90826983582004,3.92147116223193,1.26414703174326,0,2.06271086496374,0.340439605753788,2.52085531643834,5.6917820864412,1.07168517515796,0.709360934569094,1.07021290561242,0.658196082408484,1.8267896946876,1.87737366450968,2.96564899209348,1.7642271844397,0.49465875882444,3.55221738730992,0.301564624640779,0.716234064018819,0.328281799490123,8.74442509889552,0.370850604021019,6.32222258952055,4.12773735926445,1.66675074632741,0.941842285023455,2.1871076435364,1.37266903923914,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,9.17374381385292,1.21991680276109,1.51207477150522,0.418176592028937,0.218362563746178,0.539457385539283,1.65306911450672,0.26175594198403,0.90730481304255,1.24267862617385,9.01908701894705,6.87776111802302,2.48187735685646,1.16670713006429,1.80823752868824,0.337912250981556,1.87771581833206,1.43224823328345,2.72634295506848,2.89900944991207,4.60848010012585,7.58426689507628,3.24360344464263,4.72470402958205,4.93699127315621,2.68540043501222,3.57626438606277,2.16351809135944,3.69223817936443,1.9183625490148,2.13379058634,0.907435666231565,2.63136277997332,2.02044867444692,1.5193997283604,1.13365191807606,1.10992976687032,1.43542170575161,0.335769232728157,0.579568782096571,0.563047426353546,3.29672923681077,4.07299920250225,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,1.14166082342594,6.78342284781753,2.21953687480374,1.94485373654635,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.516919220600519,0.476293691283074,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0.532427418478012,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.464810523557898,0.578719832943424,1.74867404556562,1.87145286756327,2.57845264857958,2.48674831689496,1.10295709559758,0.927471342481686
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,1.267098499365,0.70219357896598,0.171217968225505,0.638177271962691,0,0.262261207256992,0,0.607425802169478,1.39912375625629,0.157731082679119,0.274228867211478,0,2.21112554392781,0.496454756004426,0.261199789138935,0.47997726838022,0,0,0,0.430942465371778,0.380046838912748,0,0,0.635030673459631,1.23012957516914,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,2.51793635951155,1.11514624341466,1.46837401729345,1.56478268869608,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.202316460859598,1.5869729378161,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,3.5524005747305,1.19840044207362,2.68952813725088,0.518448061542388,0.405017814995072,0.630974884054146,0.571301968807607,0.441737081903227,1.10241719293459,0.191690942036473,0,0,0,0,0.527545150920775,0.640413505216868,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0,0.372798891650601,0.227178579999552,0.151143120213571,0.579728977403356,0,5.439770669662,1.07940638327563,0,0.896053774194671,1.40444420131752,0.170430322578058,0.259786004602869,0,0.14084341977668,0,2.54805239706646,0,0.649473123033642,1.77351905832569,1.01104889002957,1.94112595522402,0.258937883647172,0.148442139064825,1.90833859442749,0.608930956624282,1.15307748628029,0.452167921657868,1.88141931417128,0.502666365318702,3.21353458054686,0.722996784599558,5.30766331169925,0,1.32504911076236,0,3.72783522436244,0,11.51956887474,7.40825460104915,0.11981512450592,0.599902730993408,0,0.599162557619291,0,2.01046963380583,0.347648640384553,0,0,0.324482526135515,1.52759045775474,1.36847667671102,1.51633655060205,0.210441855886474,6.8963834770233,0.459804208866946,0.900310649026746,0.452114453507145,1.63287597963187,0.768682321709099,0.281105173679186,0.517406741478031,7.97601573851516,7.18603104637713,4.04687585577082,6.35667624039967,2.22437799380478,1.0447564995665,0.823128545631774,5.57295947091781,0,0,0.284163499395593,1.44988040774851,1.17263029990548,0.180062061461015,1.65721314909647,0.196764231747404,0.154267112887378,0,0.536546802799238,1.05088808130453,0.493679549740441,0.492502392237286,0.56748166682099,0.292399974850665,0.219550115291051,0.268412837520744,0,0.823236899034275,0.660837565967596,1.85115396664481,2.77274725695804,0.696710015581316,0.644337306610467,1.4117846723634,0.667134131534611,0.951128130562796,5.69434873853414,1.64698954724011,0.754005626400808,1.59165177632921,1.16978452271472,7.19055526923377,3.6743468478698,2.58883655230677,13.0870851657626,0.685491075658373,2.25415471346161,1.01825663922657,0.969762435838129,1.61312385747733,0.442655759869801,0,0.156998727841375,0.493588655687202,1.1858105083486,2.16898637430922,2.75182593158484,0.674586337154561,1.01430060694251,2.65294875727659,1.01850340712568,2.87696137450811,23.5096078823801,2.19649130550465,2.87536413054709,3.34926852901653,0,0.757736633841335,0.896987067609561,3.37710464954357,1.84753190166605,0.568474235311454,1.30371981153621,0.169745085775188,0.938760993154008,0.837531287209079,0.952174563544055,1.17080188714679,0.630540576424764,0.8858587585951,0.637819074629948,0.655453258862952,0.518054945597687,0.723245292907558,4.52373851817817,1.08781136763742,1.47529281905711,1.65562047782839,0,0,0.819674726883377,1.26235463602186,0.94652465824877,1.56175497718655,0.861693590931196,1.19484398976276,1.33679204449436,0.283076530788832,2.02405350837447,2.92255857911312,0.790575555893047,0,2.41298144854057,4.27357448801413,1.14020871547503,2.8044920905331,0,1.94224508923985,0.906970670894253,0.754420319023592,1.18120757152309,0,0.258428293168221,2.90826983582004,3.92147116223193,1.26414703174326,0,2.06271086496374,0.340439605753788,2.52085531643834,5.6917820864412,1.07168517515796,0.709360934569094,1.07021290561242,0.658196082408484,1.8267896946876,1.87737366450968,2.96564899209348,1.7642271844397,0.49465875882444,3.55221738730992,0.301564624640779,0.716234064018819,0.328281799490123,8.74442509889552,0.370850604021019,6.32222258952055,4.12773735926445,1.66675074632741,0.941842285023455,2.1871076435364,1.37266903923914,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,9.17374381385292,1.21991680276109,1.51207477150522,0.418176592028937,0.218362563746178,0.539457385539283,1.65306911450672,0.26175594198403,0.90730481304255,1.24267862617385,9.01908701894705,6.87776111802302,2.48187735685646,1.16670713006429,1.80823752868824,0.337912250981556,1.87771581833206,1.43224823328345,2.72634295506848,2.89900944991207,4.60848010012585,7.58426689507628,3.24360344464263,4.72470402958205,4.93699127315621,2.68540043501222,3.57626438606277,2.16351809135944,3.69223817936443,1.9183625490148,2.13379058634,0.907435666231565,2.63136277997332,2.02044867444692,1.5193997283604,1.13365191807606,1.10992976687032,1.43542170575161,0.335769232728157,0.579568782096571,0.563047426353546,3.29672923681077,4.07299920250225,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,1.14166082342594,6.78342284781753,2.21953687480374,1.94485373654635,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.516919220600519,0.476293691283074,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0.532427418478012,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.464810523557898,0.578719832943424,1.74867404556562,1.87145286756327,2.57845264857958,2.48674831689496,1.10295709559758,0.927471342481686
|short_description=p4@Trim28
|short_description=p4@Trim28
}}
}}

Latest revision as of 00:03, 26 September 2015

Short description:p4@Trim28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Trim28_5end
Coexpression cluster:MCL_coexpression_mm9:62
Association with transcript: 136bp_to_ENSMUST00000123778_5end
EntrezGene:Trim28
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Trim28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E27.98
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F423.51
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C75.69
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E39.17
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F56.88
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
reproductive structure1.25e-0926
reproductive system1.25e-0926
reproductive organ7.54e-0924
mesoderm6.38e-08120
mesoderm-derived structure6.38e-08120
presumptive mesoderm6.38e-08120
primordium1.48e-07134
gonad2.35e-0718
gonad primordium2.35e-0718
anatomical cavity2.88e-0739
body cavity precursor3.90e-0738
body cavity6.22e-0737
body cavity or lining6.22e-0737
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:13615857..13615886,%2B&oldid=4222020"