FFCP PHASE1:Mm9::chr15:78402228..78402241,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=260 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:78402228..78402241,+ | |||
|description=CAGE_peak_at_chr15:78402228..78402241,+ | |description=CAGE_peak_at_chr15:78402228..78402241,+ | ||
|id=chr15:78402228..78402241,+ | |id=chr15:78402228..78402241,+ | ||
|ontology_enrichment_celltype=CL:0000988!8.27e-19!32;CL:0002032!8.27e-19!32;CL:0000037!8.27e-19!32;CL:0000566!8.27e-19!32;CL:0000837!8.27e-19!32;CL:0002031!1.72e-17!25;CL:0000838!2.77e-12!12;CL:0002320!4.09e-12!46;CL:0000134!4.09e-12!46;CL:0000063!2.29e-11!66;CL:0000084!3.01e-11!11;CL:0000827!3.01e-11!11;CL:0000542!5.03e-11!13;CL:0000051!5.03e-11!13;CL:0000738!2.28e-10!17;CL:0002087!2.28e-10!17;CL:0000791!1.08e-09!9;CL:0000789!1.08e-09!9;CL:0002420!1.08e-09!9;CL:0002419!1.08e-09!9;CL:0000790!1.08e-09!9;CL:0000049!3.36e-09!19;CL:0000219!5.84e-09!54;CL:0000763!8.41e-09!16;CL:0000624!1.05e-08!8;CL:0000050!1.90e-07!9;CL:0000839!5.52e-07!13;CL:0000893!5.54e-07!6;CL:0002489!5.54e-07!6;CL:0000898!5.54e-07!6;CL:0000809!5.54e-07!6;CL:0000810!5.54e-07!6;CL:0000895!5.54e-07!6;CL:0000808!5.54e-07!6;CL:0000894!5.54e-07!6;CL:0000806!5.54e-07!6;CL:0000807!5.54e-07!6;CL:0000805!5.54e-07!6;CL:0002425!5.54e-07!6;CL:0002436!5.54e-07!6;CL:0002427!5.54e-07!6;CL:0002428!5.54e-07!6;CL:0002429!5.54e-07!6;CL:0002433!5.54e-07!6;CL:0002431!5.54e-07!6;CL:0002432!5.54e-07!6 | |ontology_enrichment_celltype=CL:0000988!8.27e-19!32;CL:0002032!8.27e-19!32;CL:0000037!8.27e-19!32;CL:0000566!8.27e-19!32;CL:0000837!8.27e-19!32;CL:0002031!1.72e-17!25;CL:0000838!2.77e-12!12;CL:0002320!4.09e-12!46;CL:0000134!4.09e-12!46;CL:0000063!2.29e-11!66;CL:0000084!3.01e-11!11;CL:0000827!3.01e-11!11;CL:0000542!5.03e-11!13;CL:0000051!5.03e-11!13;CL:0000738!2.28e-10!17;CL:0002087!2.28e-10!17;CL:0000791!1.08e-09!9;CL:0000789!1.08e-09!9;CL:0002420!1.08e-09!9;CL:0002419!1.08e-09!9;CL:0000790!1.08e-09!9;CL:0000049!3.36e-09!19;CL:0000219!5.84e-09!54;CL:0000763!8.41e-09!16;CL:0000624!1.05e-08!8;CL:0000050!1.90e-07!9;CL:0000839!5.52e-07!13;CL:0000893!5.54e-07!6;CL:0002489!5.54e-07!6;CL:0000898!5.54e-07!6;CL:0000809!5.54e-07!6;CL:0000810!5.54e-07!6;CL:0000895!5.54e-07!6;CL:0000808!5.54e-07!6;CL:0000894!5.54e-07!6;CL:0000806!5.54e-07!6;CL:0000807!5.54e-07!6;CL:0000805!5.54e-07!6;CL:0002425!5.54e-07!6;CL:0002436!5.54e-07!6;CL:0002427!5.54e-07!6;CL:0002428!5.54e-07!6;CL:0002429!5.54e-07!6;CL:0002433!5.54e-07!6;CL:0002431!5.54e-07!6;CL:0002432!5.54e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.45e-22,25;CL:0000988,1.03e-16,32;CL:0002032,1.03e-16,32;CL:0000037,1.03e-16,32;CL:0000837,1.03e-16,32;CL:0000838,4.41e-14,12;CL:0000542,7.32e-13,13;CL:0000051,7.32e-13,13;CL:0000084,3.70e-12,11;CL:0000827,3.70e-12,11;CL:0000791,9.27e-12,9;CL:0000789,9.27e-12,9;CL:0002420,9.27e-12,9;CL:0002419,9.27e-12,9;CL:0000790,9.27e-12,9;CL:0000050,1.26e-11,9;CL:0000738,1.50e-11,17;CL:0002087,1.50e-11,17;CL:0002320,2.17e-10,46;CL:0000134,2.17e-10,46;CL:0000839,6.66e-10,13;CL:0000624,7.07e-10,8;CL:0000893,2.46e-09,6;CL:0002489,2.46e-09,6;CL:0000898,2.46e-09,6;CL:0000809,2.46e-09,6;CL:0000810,2.46e-09,6;CL:0000895,2.46e-09,6;CL:0000808,2.46e-09,6;CL:0000894,2.46e-09,6;CL:0000806,2.46e-09,6;CL:0000807,2.46e-09,6;CL:0000805,2.46e-09,6;CL:0002425,2.46e-09,6;CL:0002436,2.46e-09,6;CL:0002427,2.46e-09,6;CL:0002428,2.46e-09,6;CL:0002429,2.46e-09,6;CL:0002433,2.46e-09,6;CL:0002431,2.46e-09,6;CL:0002432,2.46e-09,6;CL:0000219,2.86e-08,54;CL:0000764,8.58e-08,3;CL:0000765,8.58e-08,3;CL:0000038,8.58e-08,3;CL:0000547,8.58e-08,3;CL:0000763,8.69e-08,16 | |||
|ontology_enrichment_disease=DOID:0050686!6.77e-08!6 | |ontology_enrichment_disease=DOID:0050686!6.77e-08!6 | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.51e-14,6;DOID:0060100,2.26e-08,3;DOID:4045,2.26e-08,3;DOID:2531,8.58e-08,3;DOID:0060083,8.58e-08,3;DOID:1240,8.58e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.81e-24!48;UBERON:0002390!7.25e-22!45;UBERON:0003061!7.25e-22!45;UBERON:0004177!1.01e-17!29;UBERON:0002405!1.55e-16!70;UBERON:0002370!1.10e-15!23;UBERON:0000974!1.10e-15!23;UBERON:0004807!1.10e-15!23;UBERON:0005058!1.10e-15!23;UBERON:0003351!1.10e-15!23;UBERON:0009113!1.10e-15!23;UBERON:0003295!1.10e-15!23;UBERON:0009722!1.10e-15!23;UBERON:0005562!1.10e-15!23;UBERON:0007690!1.10e-15!23;UBERON:0006562!9.99e-15!24;UBERON:0003408!9.99e-15!24;UBERON:0001557!9.99e-15!24;UBERON:0001042!9.99e-15!24;UBERON:0008814!9.99e-15!24;UBERON:0009145!9.99e-15!24;UBERON:0000072!2.66e-12!27;UBERON:0002384!4.09e-12!46;UBERON:0005057!4.72e-10!51;UBERON:0003081!8.77e-10!88;UBERON:0003929!6.07e-09!55;UBERON:0000063!7.86e-09!35;UBERON:0000065!8.93e-09!41;UBERON:0000490!1.44e-08!66;UBERON:0001004!2.16e-08!42;UBERON:0005911!1.41e-07!69 | |ontology_enrichment_uberon=UBERON:0002193!4.81e-24!48;UBERON:0002390!7.25e-22!45;UBERON:0003061!7.25e-22!45;UBERON:0004177!1.01e-17!29;UBERON:0002405!1.55e-16!70;UBERON:0002370!1.10e-15!23;UBERON:0000974!1.10e-15!23;UBERON:0004807!1.10e-15!23;UBERON:0005058!1.10e-15!23;UBERON:0003351!1.10e-15!23;UBERON:0009113!1.10e-15!23;UBERON:0003295!1.10e-15!23;UBERON:0009722!1.10e-15!23;UBERON:0005562!1.10e-15!23;UBERON:0007690!1.10e-15!23;UBERON:0006562!9.99e-15!24;UBERON:0003408!9.99e-15!24;UBERON:0001557!9.99e-15!24;UBERON:0001042!9.99e-15!24;UBERON:0008814!9.99e-15!24;UBERON:0009145!9.99e-15!24;UBERON:0000072!2.66e-12!27;UBERON:0002384!4.09e-12!46;UBERON:0005057!4.72e-10!51;UBERON:0003081!8.77e-10!88;UBERON:0003929!6.07e-09!55;UBERON:0000063!7.86e-09!35;UBERON:0000065!8.93e-09!41;UBERON:0000490!1.44e-08!66;UBERON:0001004!2.16e-08!42;UBERON:0005911!1.41e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.75e-21,23;UBERON:0000974,3.75e-21,23;UBERON:0004807,3.75e-21,23;UBERON:0005058,3.75e-21,23;UBERON:0003351,3.75e-21,23;UBERON:0009113,3.75e-21,23;UBERON:0003295,3.75e-21,23;UBERON:0009722,3.75e-21,23;UBERON:0005562,3.75e-21,23;UBERON:0007690,3.75e-21,23;UBERON:0006562,4.13e-20,24;UBERON:0003408,4.13e-20,24;UBERON:0001557,4.13e-20,24;UBERON:0001042,4.13e-20,24;UBERON:0008814,4.13e-20,24;UBERON:0009145,4.13e-20,24;UBERON:0000072,1.89e-17,27;UBERON:0002193,5.19e-17,48;UBERON:0002405,5.19e-17,48;UBERON:0002390,9.08e-17,45;UBERON:0003061,9.08e-17,45;UBERON:0004177,5.54e-16,29;UBERON:0005057,5.54e-16,29;UBERON:0000077,1.35e-12,35;UBERON:0007811,3.82e-12,36;UBERON:0000490,3.02e-11,66;UBERON:0002384,2.17e-10,46;UBERON:0000065,3.25e-10,41;UBERON:0003929,6.31e-10,55;UBERON:0001004,6.95e-10,42;UBERON:0000153,1.43e-09,43;UBERON:0005911,4.72e-07,69 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,0,0,1.34303417529512,1.40167584357315,5.03580961422147,15.9091256031383,20.8317428426574,0.856089841127525,1.03703806693937,1.36960583944965,2.18551006047494,0.333109761815663,1.01237633694913,0,3.47008381894061,3.29074640653773,2.97072756258621,0,0.695036658406197,2.08959831311148,0.639969691173627,0.45881856213434,0.57423196411502,2.58457197695445,2.15471232685889,0,0,0.665191531965914,3.81018404075779,1.84519436275371,15.8481681015439,0,0,0,12.9744805528441,10.9386948233332,7.32933241563318,12.3528612486513,10.2456822743767,9.22469670759192,0,0,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,3.36093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.345369963731791,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0,0.555583582109135,0.941842285023455,0.546776910884101,0.457556346413045,0.169978429993855,0.559805809294632,1.38199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,0.608175645870493,0.924398614483445,0.51968329191118,2.50637373934474,2.38417625737518,1.20195449519969,1.77227432609493,3.53382574818517,1.447929326445,1.51239277705261,1.75424185331554,2.21287235772758,6.19447581562315,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,1.74487703819681,0.454999239389536,0,0,1.34303417529512,1.40167584357315,5.03580961422147,15.9091256031383,20.8317428426574,0.856089841127525,1.03703806693937,1.36960583944965,2.18551006047494,0.333109761815663,1.01237633694913,0,3.47008381894061,3.29074640653773,2.97072756258621,0,0.695036658406197,2.08959831311148,0.639969691173627,0.45881856213434,0.57423196411502,2.58457197695445,2.15471232685889,0,0,0.665191531965914,3.81018404075779,1.84519436275371,15.8481681015439,0,0,0,12.9744805528441,10.9386948233332,7.32933241563318,12.3528612486513,10.2456822743767,9.22469670759192,0,0,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,3.36093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.345369963731791,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0,0.555583582109135,0.941842285023455,0.546776910884101,0.457556346413045,0.169978429993855,0.559805809294632,1.38199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,0.608175645870493,0.924398614483445,0.51968329191118,2.50637373934474,2.38417625737518,1.20195449519969,1.77227432609493,3.53382574818517,1.447929326445,1.51239277705261,1.75424185331554,2.21287235772758,6.19447581562315,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr15:78402228..78402241,+ | |short_description=p@chr15:78402228..78402241,+ | ||
}} | }} |
Latest revision as of 14:34, 5 August 2015
Short description: | p@chr15:78402228..78402241, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78402228..78402241, + |
Coexpression cluster: | MCL_coexpression_mm9:260 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.75e-21 | 23 |
neck | 3.75e-21 | 23 |
respiratory system epithelium | 3.75e-21 | 23 |
hemolymphoid system gland | 3.75e-21 | 23 |
pharyngeal epithelium | 3.75e-21 | 23 |
thymic region | 3.75e-21 | 23 |
pharyngeal gland | 3.75e-21 | 23 |
entire pharyngeal arch endoderm | 3.75e-21 | 23 |
thymus primordium | 3.75e-21 | 23 |
early pharyngeal endoderm | 3.75e-21 | 23 |
pharynx | 4.13e-20 | 24 |
gland of gut | 4.13e-20 | 24 |
upper respiratory tract | 4.13e-20 | 24 |
chordate pharynx | 4.13e-20 | 24 |
pharyngeal arch system | 4.13e-20 | 24 |
pharyngeal region of foregut | 4.13e-20 | 24 |
segment of respiratory tract | 1.89e-17 | 27 |
hemolymphoid system | 5.19e-17 | 48 |
immune system | 5.19e-17 | 48 |
hematopoietic system | 9.08e-17 | 45 |
blood island | 9.08e-17 | 45 |
hemopoietic organ | 5.54e-16 | 29 |
immune organ | 5.54e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 1.35e-12 | 35 |
craniocervical region | 3.82e-12 | 36 |
unilaminar epithelium | 3.02e-11 | 66 |
connective tissue | 2.17e-10 | 46 |
respiratory tract | 3.25e-10 | 41 |
gut epithelium | 6.31e-10 | 55 |
respiratory system | 6.95e-10 | 42 |
anterior region of body | 1.43e-09 | 43 |
endo-epithelium | 4.72e-07 | 69 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.51e-14 | 6 |
musculoskeletal system cancer | 2.26e-08 | 3 |
muscle cancer | 2.26e-08 | 3 |
hematologic cancer | 8.58e-08 | 3 |
immune system cancer | 8.58e-08 | 3 |
leukemia | 8.58e-08 | 3 |