FFCP PHASE1:Mm9::chr15:89011246..89011251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140570 | |EntrezGene=140570 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B2RXS4 | |UniProt=B2RXS4 | ||
|association_with_transcript=-28bp_to_ENSMUST00000171911,NM_138749,uc007xfr.1_5end | |association_with_transcript=-28bp_to_ENSMUST00000171911,NM_138749,uc007xfr.1_5end | ||
|cluster_id=chr15:89011246..89011251,- | |||
|description=CAGE_peak_7_at_Plxnb2_5end | |description=CAGE_peak_7_at_Plxnb2_5end | ||
|id=chr15:89011246..89011251,- | |id=chr15:89011246..89011251,- | ||
|ontology_enrichment_celltype=CL:0000221!3.82e-08!44;CL:0000133!3.82e-08!44;CL:0002319!9.63e-08!43;CL:0000055!1.75e-07!50 | |ontology_enrichment_celltype=CL:0000221!3.82e-08!44;CL:0000133!3.82e-08!44;CL:0002319!9.63e-08!43;CL:0000055!1.75e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.52e-17,6;CL:0002319,6.07e-11,43;CL:0000221,1.13e-10,44;CL:0000133,1.13e-10,44;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23;CL:0002608,1.63e-09,3;CL:0002453,1.21e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.01e-10,29;UBERON:0002791,3.01e-10,29;UBERON:0001893,3.01e-10,29;UBERON:0001954,7.09e-09,7;UBERON:0003022,7.09e-09,7;UBERON:0002421,7.09e-09,7;UBERON:0000349,7.09e-09,7;UBERON:0002600,7.09e-09,7;UBERON:0002020,1.18e-08,34;UBERON:0000956,1.36e-07,21;UBERON:0001869,1.36e-07,21;UBERON:0000203,1.36e-07,21;UBERON:0001017,1.42e-07,73;UBERON:0002780,1.81e-07,39;UBERON:0001890,1.81e-07,39;UBERON:0006240,1.81e-07,39;UBERON:0001016,2.43e-07,75;UBERON:0003080,2.89e-07,40 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.436050312760893,0.878744730937887,1.36100929351998,1.1198913730029,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0,1.26766280701236,1.35537812827653,0.889294796111139,0.449949858640699,0.988866362566974,2.1314403448383,0.898800331555214,1.15265491596466,1.14058573539325,0.810035629990144,1.68259969081106,0.856952953211411,0,0.734944795289724,1.15014565221884,1.83843757322004,0,0.255374676170375,0,0.263772575460388,0.823388792421687,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0.854230084794618,0.931997229126503,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,1.88481528169297,0,0,0,0.162241263067758,0.305518091550949,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.720248519221397,0.30140963567143,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0.378212160335639,0.351902248327898,0.876782929710299,0,1.0447564995665,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.402619256281115,0.420579897128254,0.411618449517138,0,0.528901133327089,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0.193952487167626,0.280543279561274,0.632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0.975668239288994,0.315270288212382,0.44292937929755,0.637819074629948,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.849229592366497,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.614870295887855,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0.16488625294148,0,0.361877549568935,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0,0,0,0,0,0.25984164595559,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0,0.695305955669133,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,0,0.355905054372522,0.492522411877817,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 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|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.436050312760893,0.878744730937887,1.36100929351998,1.1198913730029,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0,1.26766280701236,1.35537812827653,0.889294796111139,0.449949858640699,0.988866362566974,2.1314403448383,0.898800331555214,1.15265491596466,1.14058573539325,0.810035629990144,1.68259969081106,0.856952953211411,0,0.734944795289724,1.15014565221884,1.83843757322004,0,0.255374676170375,0,0.263772575460388,0.823388792421687,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0.854230084794618,0.931997229126503,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,1.88481528169297,0,0,0,0.162241263067758,0.305518091550949,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.720248519221397,0.30140963567143,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0.378212160335639,0.351902248327898,0.876782929710299,0,1.0447564995665,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.402619256281115,0.420579897128254,0.411618449517138,0,0.528901133327089,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0.193952487167626,0.280543279561274,0.632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0.975668239288994,0.315270288212382,0.44292937929755,0.637819074629948,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.849229592366497,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.614870295887855,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0.16488625294148,0,0.361877549568935,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0,0,0,0,0,0.25984164595559,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0,0.695305955669133,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,0,0.355905054372522,0.492522411877817,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p7@Plxnb2 | |short_description=p7@Plxnb2 | ||
}} | }} |
Latest revision as of 07:16, 27 September 2015
Short description: | p7@Plxnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Plxnb2_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENSMUST00000171911, NM_138749, uc007xfr.1_5end |
EntrezGene: | Plxnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.52e-17 | 6 |
neural cell | 6.07e-11 | 43 |
ectodermal cell | 1.13e-10 | 44 |
neurectodermal cell | 1.13e-10 | 44 |
CNS neuron (sensu Vertebrata) | 1.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-09 | 23 |
hippocampal neuron | 1.63e-09 | 3 |
oligodendrocyte precursor cell | 1.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 3.01e-10 | 29 |
regional part of telencephalon | 3.01e-10 | 29 |
telencephalon | 3.01e-10 | 29 |
Ammon's horn | 7.09e-09 | 7 |
lobe parts of cerebral cortex | 7.09e-09 | 7 |
hippocampal formation | 7.09e-09 | 7 |
limbic system | 7.09e-09 | 7 |
limbic lobe | 7.09e-09 | 7 |
gray matter | 1.18e-08 | 34 |
cerebral cortex | 1.36e-07 | 21 |
cerebral hemisphere | 1.36e-07 | 21 |
pallium | 1.36e-07 | 21 |
central nervous system | 1.42e-07 | 73 |
regional part of forebrain | 1.81e-07 | 39 |
forebrain | 1.81e-07 | 39 |
future forebrain | 1.81e-07 | 39 |
nervous system | 2.43e-07 | 75 |
anterior neural tube | 2.89e-07 | 40 |