FFCP PHASE1:Mm9::chr16:32165540..32165580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224109 | |EntrezGene=224109 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1599 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BMT4,D3Z2Y0 | |UniProt=Q8BMT4,D3Z2Y0 | ||
|association_with_transcript=0bp_to_ENSMUST00000115163,ENSMUST00000127287,ENSMUST00000136809,ENSMUST00000143682,ENSMUST00000144345,NM_146069,uc007yyh.1,uc007yyi.1,uc007yyj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000115163,ENSMUST00000127287,ENSMUST00000136809,ENSMUST00000143682,ENSMUST00000144345,NM_146069,uc007yyh.1,uc007yyi.1,uc007yyj.1_5end | ||
|cluster_id=chr16:32165540..32165580,- | |||
|description=CAGE_peak_1_at_Lrrc33_5end | |description=CAGE_peak_1_at_Lrrc33_5end | ||
|id=chr16:32165540..32165580,- | |id=chr16:32165540..32165580,- | ||
|ontology_enrichment_celltype=CL:0000988!1.97e-11!32;CL:0002032!1.97e-11!32;CL:0000037!1.97e-11!32;CL:0000566!1.97e-11!32;CL:0000837!1.97e-11!32;CL:0002031!1.00e-08!25;CL:0000738!2.46e-08!17;CL:0002087!2.46e-08!17;CL:0002320!5.84e-07!46;CL:0000134!5.84e-07!46;CL:0000838!9.18e-07!12 | |ontology_enrichment_celltype=CL:0000988!1.97e-11!32;CL:0002032!1.97e-11!32;CL:0000037!1.97e-11!32;CL:0000566!1.97e-11!32;CL:0000837!1.97e-11!32;CL:0002031!1.00e-08!25;CL:0000738!2.46e-08!17;CL:0002087!2.46e-08!17;CL:0002320!5.84e-07!46;CL:0000134!5.84e-07!46;CL:0000838!9.18e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-11,32;CL:0002032,1.80e-11,32;CL:0000037,1.80e-11,32;CL:0000837,1.80e-11,32;CL:0002031,9.22e-09,25;CL:0000738,2.42e-08,17;CL:0002087,2.42e-08,17;CL:0002320,4.96e-07,46;CL:0000134,4.96e-07,46;CL:0000838,9.06e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.52e-19!70;UBERON:0002390!2.20e-18!45;UBERON:0003061!2.20e-18!45;UBERON:0002193!7.42e-18!48;UBERON:0000926!6.93e-12!193;UBERON:0004120!6.93e-12!193;UBERON:0006603!6.93e-12!193;UBERON:0001041!9.56e-11!92;UBERON:0002371!1.44e-10!16;UBERON:0005057!3.18e-10!51;UBERON:0000077!3.86e-10!97;UBERON:0003081!7.07e-10!88;UBERON:0001474!1.92e-09!22;UBERON:0004765!1.92e-09!22;UBERON:0001434!1.92e-09!22;UBERON:0003104!3.16e-09!131;UBERON:0009142!3.16e-09!131;UBERON:0004177!3.58e-09!29;UBERON:0001004!1.39e-07!42;UBERON:0000065!1.79e-07!41;UBERON:0002384!5.84e-07!46 | |ontology_enrichment_uberon=UBERON:0002405!8.52e-19!70;UBERON:0002390!2.20e-18!45;UBERON:0003061!2.20e-18!45;UBERON:0002193!7.42e-18!48;UBERON:0000926!6.93e-12!193;UBERON:0004120!6.93e-12!193;UBERON:0006603!6.93e-12!193;UBERON:0001041!9.56e-11!92;UBERON:0002371!1.44e-10!16;UBERON:0005057!3.18e-10!51;UBERON:0000077!3.86e-10!97;UBERON:0003081!7.07e-10!88;UBERON:0001474!1.92e-09!22;UBERON:0004765!1.92e-09!22;UBERON:0001434!1.92e-09!22;UBERON:0003104!3.16e-09!131;UBERON:0009142!3.16e-09!131;UBERON:0004177!3.58e-09!29;UBERON:0001004!1.39e-07!42;UBERON:0000065!1.79e-07!41;UBERON:0002384!5.84e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-18,45;UBERON:0003061,1.68e-18,45;UBERON:0002193,5.75e-18,48;UBERON:0002405,5.75e-18,48;UBERON:0001041,1.12e-10,80;UBERON:0002371,1.41e-10,16;UBERON:0003081,1.50e-09,87;UBERON:0001474,2.49e-09,22;UBERON:0004765,2.49e-09,22;UBERON:0001434,2.49e-09,22;UBERON:0004177,2.92e-09,29;UBERON:0005057,2.92e-09,29;UBERON:0000077,3.30e-08,35;UBERON:0001004,1.03e-07,42;UBERON:0000065,1.33e-07,41;UBERON:0002384,4.96e-07,46;UBERON:0000926,7.63e-07,120;UBERON:0004120,7.63e-07,120;UBERON:0006603,7.63e-07,120;UBERON:0003408,8.72e-07,24 | |||
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|phase1_expression=2.88267924788629,0,0,0,0,0,0,81.8641870619594,39.9839970910734,58.0480025278544,36.9830811367091,26.564128945447,94.6740036519568,107.439674572948,73.2841475994458,74.7133736668458,30.0811607595103,207.416373723041,238.990457774803,249.541115257242,12.161190491603,263.021729731145,295.155761726997,7.51964387129011,6.19405058881359,0,0,0,0.190023419456374,0.504060259519861,1.33038306393183,1.90509202037889,1.23012957516914,0,0.288851619751275,0,0,159.042019680025,152.360392182141,115.698747418209,226.46912289194,211.06105485216,148.566168027533,0,0,0,3.9119567217402,1.30815093828268,2.19686182734472,1.55543919259427,0.839918529752175,0,276.337952177092,64.5572306390096,63.8578218370682,2.05807548828758,9.16907007804022,5.67239301505187,1.41621522601718,3.1739458756322,1.90149421051854,0,0,450.39980849934,614.086011154091,578.330813566125,148.601654817129,87.2175553079929,3.7328260431052,5.53524347159932,5.25812403378455,3.99911378165325,5.96345060569357,2.69479758272899,2.30029130443767,3.67687514644008,1.10115880999389,4.08599481872601,3.07213066512487,3.95658863190582,2.92760459527711,3.64639359389732,4.74611098302348,4.50210088025344,4.5839474333043,7.66034322231536,6.26435395516053,4.47358669980721,3.25622631332691,1.13357340160178,55.6539818307221,35.2773789562368,0,0.539703191637817,6.49776417447669,3.58421509677868,17.6959969366007,0,0,0,0.845060518660083,0,0,0,0,0,0,12.2176751299394,143.451587540533,17.9614988268438,12.1439728736295,16.1366703505435,12.2226213545711,13.2635923686308,15.8744754633201,9.92766071504436,4.44950941921873,27.1846791009434,151.268404383429,21.8385247429002,42.1807300259352,44.1236480353052,5.59175283654366,5.5628351432194,4.60782754989601,6.64188343542338,136.589241936749,120.580448929675,122.368628671361,6.5907881338122,6.8625090422794,2.38743269014442,6.43149984711423,9.46147192122223,6.64921742590592,6.16516799657479,16.3961375799009,47.1502418612253,5.05445516867349,8.83855794723191,5.72529949035896,3.90833577536904,4.68161537493908,6.32960234910003,3.81004395247436,6.79002717509704,5.24729657534481,7.76110112217047,3.88022387279116,3.40390944302075,8.44565395986955,12.4941567483718,12.7901734643775,22.6363908239408,20.1666493679785,7.56330213910274,151.678048459659,102.167119124542,128.726065226203,3.52113813310353,4.92504725960302,5.04173772090842,5.44512891845984,5.3126342571799,3.5481435964097,7.90615412151387,7.24338183778972,7.82327793860036,7.5697530960201,12.6408947340903,12.3224590509701,18.5673984030172,26.7851140655082,17.8494536951294,7.36014819974445,4.32199371992995,5.61711931072457,2.3800550999719,6.18535926552179,6.27039014023184,9.53619213783491,8.47070803418039,8.45036566610507,8.56015317506516,6.64340686162316,7.24675400785648,8.79673230800943,11.5394753783867,12.2827374885046,8.08937467788799,6.48414149624083,5.17767310461355,12.1387456609972,11.3106027483632,11.270773567308,11.6081256871829,11.2492442557223,12.6945834001477,10.2443190141297,6.7900668070617,9.26292494264111,6.04646103216823,13.6368208460088,24.3593854345497,29.090731276754,26.7585913737976,33.2690599077145,38.1059912408819,40.4855104332458,43.7298128925232,35.8318851172828,34.0456152353221,38.8174157623857,36.0976719238448,28.7074659265396,17.4279425783507,12.7372163600558,13.5084185981743,47.2968166826508,10.8010104709176,19.8817271259272,28.007939152906,26.5199980566007,46.0642207964993,57.3685174535293,30.8311163615322,34.679731703362,36.9846031713454,30.1369512762651,42.2767351966604,49.3879048136461,31.388845712188,250.313531339192,199.069480277648,21.6376280128376,23.1786866895975,4.65596710964597,4.45404409050372,0,15.4007265594668,0,0,0.215423397732799,0,0,0,0,0,0,7.39039027770156,13.200427924369,14.7794451043822,13.0309567482861,20.7862354945395,2.65490276679926,9.46844481004428,10.5813244937663,8.29862350925952,28.3489817165542,19.6758494684114,27.3933990758314,19.2672876623078,17.4683715408513,15.1697643809192,15.8127912862498,17.5330423521918,3.74483566329167,5.221771726908,9.9606186512721,9.43082954139006,8.6896714484714,16.0531935841863,12.3411765451591,14.3098526083862,8.44818149029357,5.71946591332314,4.85162475720916,20.940554123568,25.9957726980408,15.3194829317516,14.4440536243795,10.833299383174,9.03590593552537,4.26478194624172,111.066072518604,69.7587613715692,72.596254728927,58.3942216714542,66.7067831278603,86.9357058184786,46.4041113883225,63.5379593549407,54.8653896003562,7.63736494412091,7.59206384594725,13.0124458961183,7.99239522081329,14.8452690170273,13.3201163885168,10.7891477107857,13.0592460046031,12.5642852152334,7.2584385043404,20.5041973318685,0.56369293868419,3.88743019714345,3.30916980914195,3.88902376688095,4.90807329215378,5.4065960157049,4.81164678447591,4.81756223922615,3.14578033277133,2.89900944991207,3.74439008135225,87.8510915346336,67.5074966916247,70.4597166150715,88.8658429168118,92.7358283557554,97.3538638428198,76.8048922432601,81.6723085275412,61.3876015684738,72.6250867422148,73.1998104093462,71.9239159859373,88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| ||
|short_description=p1@Lrrc33 | |short_description=p1@Lrrc33 | ||
}} | }} |
Latest revision as of 21:18, 1 October 2015
Short description: | p1@Lrrc33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc33_5end |
Coexpression cluster: | MCL_coexpression_mm9:1599 |
Association with transcript: | 0bp_to_ENSMUST00000115163, ENSMUST00000127287, ENSMUST00000136809, ENSMUST00000143682, ENSMUST00000144345, NM_146069, uc007yyh.1, uc007yyi.1, uc007yyj.1_5end |
EntrezGene: | Lrrc33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.80e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.80e-11 | 32 |
hematopoietic stem cell | 1.80e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.80e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 9.22e-09 | 25 |
leukocyte | 2.42e-08 | 17 |
nongranular leukocyte | 2.42e-08 | 17 |
connective tissue cell | 4.96e-07 | 46 |
mesenchymal cell | 4.96e-07 | 46 |
lymphoid lineage restricted progenitor cell | 9.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-18 | 45 |
blood island | 1.68e-18 | 45 |
hemolymphoid system | 5.75e-18 | 48 |
immune system | 5.75e-18 | 48 |
foregut | 1.12e-10 | 80 |
bone marrow | 1.41e-10 | 16 |
lateral plate mesoderm | 1.50e-09 | 87 |
bone element | 2.49e-09 | 22 |
skeletal element | 2.49e-09 | 22 |
skeletal system | 2.49e-09 | 22 |
hemopoietic organ | 2.92e-09 | 29 |
immune organ | 2.92e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 3.30e-08 | 35 |
respiratory system | 1.03e-07 | 42 |
respiratory tract | 1.33e-07 | 41 |
connective tissue | 4.96e-07 | 46 |
mesoderm | 7.63e-07 | 120 |
mesoderm-derived structure | 7.63e-07 | 120 |
presumptive mesoderm | 7.63e-07 | 120 |
gland of gut | 8.72e-07 | 24 |