FFCP PHASE1:Mm9::chr17:36046945..36046974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73242 | |EntrezGene=73242 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000174436_5end | |association_with_transcript=0bp_to_ENSMUST00000174436_5end | ||
|cluster_id=chr17:36046945..36046974,- | |||
|description=CAGE_peak_2_at_Atat1_5end | |description=CAGE_peak_2_at_Atat1_5end | ||
|id=chr17:36046945..36046974,- | |id=chr17:36046945..36046974,- | ||
|ontology_enrichment_celltype=CL:0000221!7.92e-21!44;CL:0000133!7.92e-21!44;CL:0002319!1.89e-20!43;CL:0000540!2.59e-18!33;CL:0000047!2.59e-18!33;CL:0000031!2.59e-18!33;CL:0000404!2.59e-18!33;CL:0000055!1.47e-16!50;CL:0000393!3.21e-15!39;CL:0000211!3.21e-15!39;CL:0002321!7.64e-14!70;CL:0000220!7.64e-14!70;CL:0000117!1.08e-13!23;CL:0000337!1.08e-13!23 | |ontology_enrichment_celltype=CL:0000221!7.92e-21!44;CL:0000133!7.92e-21!44;CL:0002319!1.89e-20!43;CL:0000540!2.59e-18!33;CL:0000047!2.59e-18!33;CL:0000031!2.59e-18!33;CL:0000404!2.59e-18!33;CL:0000055!1.47e-16!50;CL:0000393!3.21e-15!39;CL:0000211!3.21e-15!39;CL:0002321!7.64e-14!70;CL:0000220!7.64e-14!70;CL:0000117!1.08e-13!23;CL:0000337!1.08e-13!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.44e-23,44;CL:0000133,6.44e-23,44;CL:0002319,1.69e-22,43;CL:0000540,3.97e-20,33;CL:0000047,3.97e-20,33;CL:0000031,3.97e-20,33;CL:0000404,3.97e-20,33;CL:0000393,1.71e-17,39;CL:0000211,1.71e-17,39;CL:0002321,2.39e-15,70;CL:0000117,5.26e-15,23;CL:0000337,5.26e-15,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.17e-27!75;UBERON:0001016!3.17e-27!75;UBERON:0001017!9.07e-27!73;UBERON:0005743!9.07e-27!73;UBERON:0004121!3.10e-23!102;UBERON:0000924!3.10e-23!102;UBERON:0006601!3.10e-23!102;UBERON:0002346!1.54e-17!71;UBERON:0003075!1.54e-17!71;UBERON:0007284!1.54e-17!71;UBERON:0001049!9.05e-17!52;UBERON:0005068!9.05e-17!52;UBERON:0006241!9.05e-17!52;UBERON:0007135!9.05e-17!52;UBERON:0000033!5.90e-16!63;UBERON:0000955!1.53e-14!50;UBERON:0006238!1.53e-14!50;UBERON:0002616!1.80e-14!49;UBERON:0002020!3.29e-14!34;UBERON:0003056!6.79e-14!49;UBERON:0003080!2.85e-12!40;UBERON:0002780!6.53e-12!39;UBERON:0001890!6.53e-12!39;UBERON:0006240!6.53e-12!39;UBERON:0002791!2.42e-11!29;UBERON:0003528!2.42e-11!29;UBERON:0001893!2.42e-11!29;UBERON:0000956!9.01e-08!21;UBERON:0001869!9.01e-08!21;UBERON:0000203!9.01e-08!21;UBERON:0000153!2.06e-07!94;UBERON:0007811!9.59e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!3.17e-27!75;UBERON:0001016!3.17e-27!75;UBERON:0001017!9.07e-27!73;UBERON:0005743!9.07e-27!73;UBERON:0004121!3.10e-23!102;UBERON:0000924!3.10e-23!102;UBERON:0006601!3.10e-23!102;UBERON:0002346!1.54e-17!71;UBERON:0003075!1.54e-17!71;UBERON:0007284!1.54e-17!71;UBERON:0001049!9.05e-17!52;UBERON:0005068!9.05e-17!52;UBERON:0006241!9.05e-17!52;UBERON:0007135!9.05e-17!52;UBERON:0000033!5.90e-16!63;UBERON:0000955!1.53e-14!50;UBERON:0006238!1.53e-14!50;UBERON:0002616!1.80e-14!49;UBERON:0002020!3.29e-14!34;UBERON:0003056!6.79e-14!49;UBERON:0003080!2.85e-12!40;UBERON:0002780!6.53e-12!39;UBERON:0001890!6.53e-12!39;UBERON:0006240!6.53e-12!39;UBERON:0002791!2.42e-11!29;UBERON:0003528!2.42e-11!29;UBERON:0001893!2.42e-11!29;UBERON:0000956!9.01e-08!21;UBERON:0001869!9.01e-08!21;UBERON:0000203!9.01e-08!21;UBERON:0000153!2.06e-07!94;UBERON:0007811!9.59e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.15e-30,75;UBERON:0001017,2.30e-29,73;UBERON:0004121,1.67e-26,95;UBERON:0000924,1.67e-26,95;UBERON:0006601,1.67e-26,95;UBERON:0002346,9.11e-22,64;UBERON:0003075,9.11e-22,64;UBERON:0007284,9.11e-22,64;UBERON:0000073,5.99e-19,54;UBERON:0010371,1.04e-18,73;UBERON:0001049,2.73e-18,52;UBERON:0005068,2.73e-18,52;UBERON:0006241,2.73e-18,52;UBERON:0007135,2.73e-18,52;UBERON:0002020,1.94e-15,34;UBERON:0003056,4.12e-15,49;UBERON:0000955,1.27e-14,47;UBERON:0006238,1.27e-14,47;UBERON:0002616,1.52e-14,46;UBERON:0003080,2.61e-13,40;UBERON:0002780,6.53e-13,39;UBERON:0001890,6.53e-13,39;UBERON:0006240,6.53e-13,39;UBERON:0003528,2.88e-12,29;UBERON:0002791,2.88e-12,29;UBERON:0001893,2.88e-12,29;UBERON:0010314,6.45e-11,92;UBERON:0000956,2.54e-08,21;UBERON:0001869,2.54e-08,21;UBERON:0000203,2.54e-08,21 | |||
|phase1_expression=2.5623815536767,3.14077866875425,3.63999391511629,1.20985684522732,2.00358291978539,2.35030980676646,3.03696432774183,0.258246646883153,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,9.43980520676875,0.695036658406197,0.522399578277871,0.95995453676044,0.91763712426868,1.14846392823004,1.29228598847722,3.66301095566011,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,1.17646297606203,0,0,2.26614272356039,2.83855407414641,3.12029478674859,1.56478268869608,3.48840250208714,4.83309602015838,5.05517737593137,1.39986421625363,4.31257693094915,0.503347818173209,0,0.336093799142464,1.02903774414379,0,0,43.4980390848135,37.0293685490423,48.8050180699758,0.677689064138264,0,0.449949858640699,0,0,8.08920298399693,16.1371688235053,30.4847460186924,30.9163598779572,29.2351696278421,12.5686433137674,12.1477697523387,31.3576445990282,32.0123873200909,36.7687514644008,4.40463523997555,5.87361755191863,4.6081959976873,43.1268160877734,46.0182847320121,31.7757156039624,5.862842979029,3.93933827022176,4.12555268997387,12.6690291753677,10.3931326983345,30.9423080069999,2.34751199332871,4.60986516651392,2.02905142091174,0,0.679971333707751,0,2.59910566979068,1.79210754838934,1.54488862144927,0.340860645156116,0.519572009205738,1.41335829804136,4.78867627240714,1.28326477414318,2.54805239706646,0,0.865964164044856,0.506719730950197,2.52762222507392,0.79928715803342,1.03575153458869,0.445326417194474,2.94925055502431,1.82679286987285,0.461230994512117,0.452167921657868,1.76383060703557,0.251333182659351,0.494389935468748,1.15679485535929,0.884610551949874,0.647067399789637,0,0.484875253135222,0,1.46390398505774,2.72280718857492,0.510914110417183,0.479260498023681,0.599902730993408,0.127070227073065,4.79330046095433,4.11750542536764,36.4397621127307,3.65031072403781,4.34716277461562,6.2336413367868,8.76102820565891,0.916554274652847,0.497627882440372,1.76905930903572,1.05220927943237,3.25301107406759,4.59804208866946,6.66229880279792,3.91832526372859,4.08218994907967,3.71529788826064,3.18585863503078,2.84573707812917,4.31135985865684,6.05139456537022,3.69497360744293,1.53437012699302,1.39023624612799,2.089512999133,0.823128545631774,1.19420560091096,0,0,0,1.86413195281952,0.234526059981096,1.44049649168812,0.946978942340841,0.787056926989615,0.771335564436891,0.465067889500816,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.162137619091711,0.292399974850665,0,0.671032093801859,3.15434922846191,37.3543742936803,1.32167513193519,0.528901133327089,4.69234151177515,3.25131340604614,2.06187938115349,1.21010114774006,0.889512175379481,0.380451252225118,0.949058123089023,0,0.251335208800269,0.198956472041151,0.779856348476481,1.79763881730844,0,0,1.89667900953082,1.14248512609729,3.38123207019241,1.22190796707189,0.387904974335251,0.98190147846446,1.07502113111237,0.442830443938806,0.31399745568275,0.246794327843601,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,1.87222603868736,0.505157755894224,0.538192240565737,0.482443521363367,0.739012760666419,2.84237117655727,2.44447464663039,1.01847051465113,1.40814148973101,0.335012514883631,0.952174563544055,0.195133647857799,0.788175720530955,0.664394068946325,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,1.50791283939272,0,1.96705709207614,1.93155722413313,7.70642831941401,12.0728037189969,0.327869890753351,0.252470927204373,6.31016438832513,4.68526493155966,6.89354872744957,9.79772071605463,16.932699230262,18.6830510320629,7.2865926301481,11.3979784585412,13.8350722281283,2.57057053137446,1.13552068166615,0.712262414669021,0.651547837414304,1.97964147567043,0,1.21390318077491,0.906970670894253,0.565815239267694,0,1.84461088766356,1.29214146584111,0.363533729477506,0,0,1.05418608574999,0,1.36175842301515,2.88097750450096,4.2688365648309,3.00071849044229,1.77340233642274,1.07021290561242,1.97458824722545,1.2178597964584,0,1.0591603543191,1.32317038832977,0.16488625294148,0.322928853391811,0.422190474497091,0.716234064018819,0.656563598980245,1.1659233465194,9.08583979851498,0.170870880797853,1.23832120777933,0.185194527369712,0,0.136694227721025,0.228778173206523,0.509935289981566,1.53946597556024,0.552799895217695,0,4.27053591334533,2.43983360552218,1.18805874903981,1.25452977608681,0.655087691238533,0.674321731924103,0.826534557253359,0.26175594198403,0.388844919875379,0.621339313086926,35.512655137104,1.49516546043979,0.992750942742586,2.13896307178452,0.387479470433193,0.844780627453891,0.58678619322877,1.43224823328345,1.25831213310853,3.38217769156408,38.8840508448118,0,1.21635129174099,1.1298205288131,0.129920822977795,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.403865799792591,0.457240839929999,0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| ||
|short_description=p2@Atat1 | |short_description=p2@Atat1 | ||
}} | }} |
Latest revision as of 10:58, 26 September 2015
Short description: | p2@Atat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000174436_5end |
EntrezGene: | Atat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.44e-23 | 44 |
neurectodermal cell | 6.44e-23 | 44 |
neural cell | 1.69e-22 | 43 |
neuron | 3.97e-20 | 33 |
neuronal stem cell | 3.97e-20 | 33 |
neuroblast | 3.97e-20 | 33 |
electrically signaling cell | 3.97e-20 | 33 |
electrically responsive cell | 1.71e-17 | 39 |
electrically active cell | 1.71e-17 | 39 |
embryonic cell | 2.39e-15 | 70 |
CNS neuron (sensu Vertebrata) | 5.26e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.26e-15 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.15e-30 | 75 |
central nervous system | 2.30e-29 | 73 |
ectoderm-derived structure | 1.67e-26 | 95 |
ectoderm | 1.67e-26 | 95 |
presumptive ectoderm | 1.67e-26 | 95 |
neurectoderm | 9.11e-22 | 64 |
neural plate | 9.11e-22 | 64 |
presumptive neural plate | 9.11e-22 | 64 |
regional part of nervous system | 5.99e-19 | 54 |
ecto-epithelium | 1.04e-18 | 73 |
neural tube | 2.73e-18 | 52 |
neural rod | 2.73e-18 | 52 |
future spinal cord | 2.73e-18 | 52 |
neural keel | 2.73e-18 | 52 |
gray matter | 1.94e-15 | 34 |
pre-chordal neural plate | 4.12e-15 | 49 |
brain | 1.27e-14 | 47 |
future brain | 1.27e-14 | 47 |
regional part of brain | 1.52e-14 | 46 |
anterior neural tube | 2.61e-13 | 40 |
regional part of forebrain | 6.53e-13 | 39 |
forebrain | 6.53e-13 | 39 |
future forebrain | 6.53e-13 | 39 |
brain grey matter | 2.88e-12 | 29 |
regional part of telencephalon | 2.88e-12 | 29 |
telencephalon | 2.88e-12 | 29 |
structure with developmental contribution from neural crest | 6.45e-11 | 92 |
cerebral cortex | 2.54e-08 | 21 |
cerebral hemisphere | 2.54e-08 | 21 |
pallium | 2.54e-08 | 21 |