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FFCP PHASE1:Mm9::chr19:28085586..28085622,-: Difference between revisions

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|id=chr19:28085586..28085622,-
|id=chr19:28085586..28085622,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0000153!2.98e-20!94;UBERON:0007811!4.31e-17!86;UBERON:0003056!1.44e-16!49;UBERON:0000033!7.47e-16!63;UBERON:0001017!4.75e-14!73;UBERON:0005743!4.75e-14!73;UBERON:0002346!5.58e-14!71;UBERON:0003075!5.58e-14!71;UBERON:0007284!5.58e-14!71;UBERON:0003080!5.39e-13!40;UBERON:0000073!5.74e-13!75;UBERON:0001016!5.74e-13!75;UBERON:0000955!1.09e-12!50;UBERON:0006238!1.09e-12!50;UBERON:0002780!1.46e-12!39;UBERON:0001890!1.46e-12!39;UBERON:0006240!1.46e-12!39;UBERON:0001049!2.87e-12!52;UBERON:0005068!2.87e-12!52;UBERON:0006241!2.87e-12!52;UBERON:0007135!2.87e-12!52;UBERON:0002616!4.18e-12!49;UBERON:0004121!1.60e-11!102;UBERON:0000924!1.60e-11!102;UBERON:0006601!1.60e-11!102;UBERON:0002020!1.14e-09!34;UBERON:0002791!1.80e-09!29;UBERON:0003528!1.80e-09!29;UBERON:0001893!1.80e-09!29;UBERON:0000956!5.21e-08!21;UBERON:0001869!5.21e-08!21;UBERON:0000203!5.21e-08!21;UBERON:0002021!6.60e-08!10;UBERON:0000411!6.60e-08!10;UBERON:0001950!6.60e-08!10;UBERON:0002619!2.33e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.98e-16,64;UBERON:0003075,1.98e-16,64;UBERON:0007284,1.98e-16,64;UBERON:0003056,2.04e-16,49;UBERON:0001017,4.64e-14,73;UBERON:0010371,4.34e-13,73;UBERON:0001016,7.33e-13,75;UBERON:0003080,8.07e-13,40;UBERON:0004121,1.14e-12,95;UBERON:0000924,1.14e-12,95;UBERON:0006601,1.14e-12,95;UBERON:0000073,1.82e-12,54;UBERON:0000955,2.11e-12,47;UBERON:0006238,2.11e-12,47;UBERON:0002780,2.20e-12,39;UBERON:0001890,2.20e-12,39;UBERON:0006240,2.20e-12,39;UBERON:0001049,2.98e-12,52;UBERON:0005068,2.98e-12,52;UBERON:0006241,2.98e-12,52;UBERON:0007135,2.98e-12,52;UBERON:0002616,8.21e-12,46;UBERON:0002020,1.74e-09,34;UBERON:0003528,2.85e-09,29;UBERON:0002791,2.85e-09,29;UBERON:0001893,2.85e-09,29;UBERON:0010314,8.64e-09,92;UBERON:0002021,5.69e-08,10;UBERON:0000411,5.69e-08,10;UBERON:0001950,5.69e-08,10;UBERON:0000956,8.84e-08,21;UBERON:0001869,8.84e-08,21;UBERON:0000203,8.84e-08,21;UBERON:0002619,4.15e-07,17;UBERON:0000153,5.59e-07,43
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|phase1_expression=4.64431656603902,0,0,1.51232105653415,0.500895729946347,0.839396359559449,2.80335168714631,3.48632973292256,1.68946466582,1.87251621057595,0.513653904676515,0.398860794976682,9.0736386863539,11.1023911072127,0.333109761815663,1.21485160433896,0.699561878128147,5.20512572841092,6.17014951225825,0.84877930359606,7.65389611359628,2.08510997521859,2.35079810225042,0.639969691173627,0.22940928106717,0,0.430761996159075,0.861884930743556,0.380046838912748,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,2.59966457776147,1.49611180822643,3.06254034393554,0,2.3440060335714,2.61761871986899,2.35292595212406,1.36609096991689,2.42755176515577,0.503587271902309,0.304130793658544,0.183546752161682,0,1.96222640742402,0.878744730937887,0.972149495371417,1.1198913730029,1.43752564364972,2.85230430298152,2.90144856804538,10.7550015725588,0.257259436035947,0.573066879877513,0.515672092277442,7.48570905180512,5.81890077199236,2.53532561402472,0,0,0,0,0,1.19840044207362,1.53687322128622,7.77672092313582,4.59020190327748,4.41682418837902,2.57085885963423,1.76694832761291,8.69684674426174,6.90087391331302,5.51531271966013,3.30347642998166,6.38436690425939,6.29786786350598,6.3305418110493,7.86793734980723,7.29278718779464,2.23346399201105,5.6276261003168,5.04234217663473,10.9012576625257,10.3931326983345,5.96478226640962,0.908714319998209,1.058001841495,2.6087803983151,0.860423876981386,0,0,0,0.896053774194671,1.96622188184453,0.170430322578058,0,0,4.92951969218382,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,1.59857431606684,13.4647699496529,3.11728492036132,3.99016251562112,2.13125834818499,0.922461989024234,1.50722640552623,2.58695155698551,1.13099932196708,0.494389935468748,0.578397427679647,0.884610551949874,0.808834249737046,3.5334642953663,2.90925151881133,5.59175283654366,8.49064311333487,8.16842156572475,1.02182822083437,4.67278985573089,5.39912457894067,2.28726408731516,9.58660092190865,18.3000241127451,14.3245961408665,14.7750672163435,12.0186264945255,8.10373373782284,8.27430441645564,3.05518091550949,2.11491850037158,1.26361379216837,2.73574412652416,10.539755879979,8.04657365517155,11.7040384373477,10.0972227949929,10.2054748726992,12.4270308676304,12.5560310910037,15.2634988736019,9.05385570317937,16.8304411349359,9.32540958068929,5.2606975782618,11.1218899690239,6.268538997399,5.55611768301447,4.17971960318836,2.80885274925294,1.54408744268829,3.6941254921427,4.97101854085205,3.51789089971644,1.98068267607116,5.91861838963026,3.93528463494808,3.5481435964097,3.48800917125612,2.14618721119695,1.86824547787471,0.822799249567402,1.80584210487005,0.810688095458557,1.46199987425332,1.09775057645525,0.805238512562231,20.1878350621562,15.2298826321341,0.991256348951394,1.05780226665418,8.10495352033889,9.28946687441754,4.76809606891745,2.42020229548011,3.11329261382818,2.47293313946327,1.89811624617805,0.988193728344065,2.26201687920243,0.994782360205754,1.55971269695296,1.79763881730844,1.29682829924817,0.398282546508734,2.27601481143698,4.91268604221834,3.38123207019241,5.09128319613286,5.04276466635827,3.15611189506434,2.59269802209455,1.47610147979602,1.41298855057237,0.987177311374404,0.889357881261447,2.33583148002532,2.35870794135844,1.34917267430912,0.811440485554012,0.72353147925725,1.78238096246994,1.43848068725405,1.94562272130042,0,2.87536413054709,0.372140947668503,0.312037673114561,1.26289438973556,0.717589654087649,0.964887042726734,3.51031061316549,5.68474235311454,10.5927234687317,8.14776411720903,7.51008794523207,7.87279409976534,4.52282917683426,3.51240566144038,3.4679731703362,2.6575762757853,2.55127629851979,2.45794972073607,2.93564469172023,3.32692834737477,1.50791283939272,0,0.983528546038072,0.827810238914197,4.65596710964597,2.34423373184406,1.14754461763673,0.504941854408746,4.41711507182759,5.85658116444958,9.26320610251035,6.21318874676635,8.24355094104858,9.34152551603147,8.90583543684768,7.89090816360542,8.69633111482352,19.2792789853084,3.12268187458191,1.6025904330053,2.44330439030364,5.27904393512113,5.30980553359851,5.34117399540959,4.83717691143602,4.33791683438566,2.65771703592696,5.53383266299069,2.06742634534577,2.90826983582004,2.85197902707777,4.10847785316561,2.10837217149998,3.09406629744561,20.0859367394735,9.72329907769075,3.75140182969988,8.3591443662321,17.0246624296583,7.13475270408282,11.0247843803421,3.65357938937519,0.704015124191131,0.63549621259146,1.54369878638473,3.13283880588812,3.06782410722221,1.80938774784468,0.954978752025092,1.14898629821543,0.582961673259701,5.00648315428376,2.9048049735635,3.50857675537478,3.33350149265481,1.50694765603753,2.87057878214153,1.37266903923914,3.73952545986482,3.91864066506242,2.48759952847963,2.86401185404534,8.54107182669065,5.28630614529807,3.45617090629764,3.55450103224597,2.40198820120795,0.944050424693745,0.991841468704031,0.785267825952089,0.90730481304255,3.72803587852155,13.5286305284206,2.54178128274764,1.65458490457098,1.94451188344048,2.32487682259916,3.37912250981556,2.58185925020659,1.69265700297135,0.629156066554265,3.8653459332161,11.5212002503146,22.4367895646007,1.01362607645082,3.49217254360413,3.76770386635606,9.13036147904155,13.3116507703447,9.49544051207754,11.0767145380933,12.317906893674,9.22102360525498,14.8214492151156,18.127165817594,13.8545051962074,15.5446279901487,1.81384306892169,0,0.448569283047378,0.167884616364078,1.73870634628971,1.31377732815827,3.29672923681077,1.92931541171159,1.50471631210609,21.4605700194485,31.302116082488,32.6550442660456,18.7319968754619,20.5524755931193,15.107877947794,16.8755625057951,15.3109209096235,21.2976932222576,18.6393712230655,9.65222332532843,19.9512436700516,8.19521307619844,8.99494853152688,3.35381060204772,3.49302666055027,6.66740183404846,7.41726206060019,8.66481865897901,6.82282471762253,7.60437899670719,7.54505365544305,6.08669798554236,6.78666615491614,5.34149861287203,4.76293691283074,6.60540657885676,4.43691207066522,3.70877310722976,6.47675248591348,7.88599280486455,6.21165321557681,7.15308569841963,6.39524233182245,7.24642229198046,4.73841804193388,5.3049112133104,4.47218509444333,4.48153575691344,5.61142271657738,4.27086065247027,3.94017929502254,9.41231399290286,4.95797891795091,7.71626443924566,5.9954538705107,5.14649538579898,4.51229213501426,1.53030665655075,1.76473135295612,1.39120701372253
|short_description=p3@Rfx3
|short_description=p3@Rfx3
}}
}}

Revision as of 18:09, 14 November 2012

Short description:p3@Rfx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rfx3_5end
Coexpression cluster:NA
Association with transcript: 7bp_to_ENSMUST00000174850_5end
EntrezGene:Rfx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rfx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.07
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H913.46
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C610.54
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D410.10
eyeball, neonate N00.CNhs11207.633-15C610.21
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A215.26
forelimb, embryo E11.CNhs10596.335-25E29.05
forelimb, embryo E12.CNhs10600.359-14H216.83
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E820.19
hippocampus, neonate N00.CNhs11228.627-43G115.23
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F810.59
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B917.02
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E211.52
thymus, adult.CNhs10471.38-12B522.44
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G413.31
thymus, neonate N02.CNhs11181.1541-43F89.50
thymus, neonate N03.CNhs11137.2104-43C711.08
thymus, neonate N06.CNhs11197.681-26C412.32
thymus, neonate N07.CNhs11211.713-19D39.22
thymus, neonate N10.CNhs11194.748-24E414.82
thymus, neonate N20.CNhs11186.820-7A218.13
thymus, neonate N25.CNhs11125.1362-25G713.85
thymus, neonate N30.CNhs11132.1393-42G215.54
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A121.46
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I89.65
whole body, embryo E12.CNhs10587.857-27C919.95
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.98e-1664
neural plate1.98e-1664
presumptive neural plate1.98e-1664
pre-chordal neural plate2.04e-1649
central nervous system4.64e-1473
ecto-epithelium4.34e-1373
nervous system7.33e-1375
anterior neural tube8.07e-1340
ectoderm-derived structure1.14e-1295
ectoderm1.14e-1295
presumptive ectoderm1.14e-1295
regional part of nervous system1.82e-1254
brain2.11e-1247
future brain2.11e-1247
regional part of forebrain2.20e-1239
forebrain2.20e-1239
future forebrain2.20e-1239
neural tube2.98e-1252
neural rod2.98e-1252
future spinal cord2.98e-1252
neural keel2.98e-1252
regional part of brain8.21e-1246
gray matter1.74e-0934
brain grey matter2.85e-0929
regional part of telencephalon2.85e-0929
telencephalon2.85e-0929
structure with developmental contribution from neural crest8.64e-0992
occipital lobe5.69e-0810
visual cortex5.69e-0810
neocortex5.69e-0810
cerebral cortex8.84e-0821
cerebral hemisphere8.84e-0821
pallium8.84e-0821
regional part of cerebral cortex4.15e-0717
anterior region of body5.59e-0743







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