FFCP PHASE1:Mm9::chr4:44025529..44025532,+: Difference between revisions
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|id=chr4:44025529..44025532,+ | |id=chr4:44025529..44025532,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.63e-11!50;CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000221!8.35e-11!44;CL:0000133!8.35e-11!44;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0002319!1.41e-10!43;CL:0000540!5.79e-10!33;CL:0000047!5.79e-10!33;CL:0000031!5.79e-10!33;CL:0000404!5.79e-10!33 | |ontology_enrichment_celltype=CL:0000055!2.63e-11!50;CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000221!8.35e-11!44;CL:0000133!8.35e-11!44;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0002319!1.41e-10!43;CL:0000540!5.79e-10!33;CL:0000047!5.79e-10!33;CL:0000031!5.79e-10!33;CL:0000404!5.79e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.13e-11,23;CL:0000337,5.13e-11,23;CL:0000221,8.35e-11,44;CL:0000133,8.35e-11,44;CL:0000393,1.03e-10,39;CL:0000211,1.03e-10,39;CL:0002319,1.41e-10,43;CL:0000540,5.79e-10,33;CL:0000047,5.79e-10,33;CL:0000031,5.79e-10,33;CL:0000404,5.79e-10,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-20!75;UBERON:0001016!1.72e-20!75;UBERON:0001017!4.10e-20!73;UBERON:0005743!4.10e-20!73;UBERON:0002346!1.78e-18!71;UBERON:0003075!1.78e-18!71;UBERON:0007284!1.78e-18!71;UBERON:0001049!1.35e-17!52;UBERON:0005068!1.35e-17!52;UBERON:0006241!1.35e-17!52;UBERON:0007135!1.35e-17!52;UBERON:0004121!2.33e-17!102;UBERON:0000924!2.33e-17!102;UBERON:0006601!2.33e-17!102;UBERON:0000955!4.49e-16!50;UBERON:0006238!4.49e-16!50;UBERON:0002616!1.12e-15!49;UBERON:0000033!1.09e-14!63;UBERON:0002020!1.37e-13!34;UBERON:0003080!1.19e-12!40;UBERON:0003056!1.98e-12!49;UBERON:0002780!4.36e-12!39;UBERON:0001890!4.36e-12!39;UBERON:0006240!4.36e-12!39;UBERON:0002791!3.96e-11!29;UBERON:0003528!3.96e-11!29;UBERON:0001893!3.96e-11!29;UBERON:0000956!2.15e-07!21;UBERON:0001869!2.15e-07!21;UBERON:0000203!2.15e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!1.72e-20!75;UBERON:0001016!1.72e-20!75;UBERON:0001017!4.10e-20!73;UBERON:0005743!4.10e-20!73;UBERON:0002346!1.78e-18!71;UBERON:0003075!1.78e-18!71;UBERON:0007284!1.78e-18!71;UBERON:0001049!1.35e-17!52;UBERON:0005068!1.35e-17!52;UBERON:0006241!1.35e-17!52;UBERON:0007135!1.35e-17!52;UBERON:0004121!2.33e-17!102;UBERON:0000924!2.33e-17!102;UBERON:0006601!2.33e-17!102;UBERON:0000955!4.49e-16!50;UBERON:0006238!4.49e-16!50;UBERON:0002616!1.12e-15!49;UBERON:0000033!1.09e-14!63;UBERON:0002020!1.37e-13!34;UBERON:0003080!1.19e-12!40;UBERON:0003056!1.98e-12!49;UBERON:0002780!4.36e-12!39;UBERON:0001890!4.36e-12!39;UBERON:0006240!4.36e-12!39;UBERON:0002791!3.96e-11!29;UBERON:0003528!3.96e-11!29;UBERON:0001893!3.96e-11!29;UBERON:0000956!2.15e-07!21;UBERON:0001869!2.15e-07!21;UBERON:0000203!2.15e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-20,75;UBERON:0001017,4.10e-20,73;UBERON:0000073,2.89e-18,54;UBERON:0001049,1.35e-17,52;UBERON:0005068,1.35e-17,52;UBERON:0006241,1.35e-17,52;UBERON:0007135,1.35e-17,52;UBERON:0002346,2.69e-17,64;UBERON:0003075,2.69e-17,64;UBERON:0007284,2.69e-17,64;UBERON:0004121,5.74e-16,95;UBERON:0000924,5.74e-16,95;UBERON:0006601,5.74e-16,95;UBERON:0000955,6.03e-15,47;UBERON:0006238,6.03e-15,47;UBERON:0010371,1.12e-14,73;UBERON:0002616,1.48e-14,46;UBERON:0002020,1.37e-13,34;UBERON:0003080,1.19e-12,40;UBERON:0003056,1.98e-12,49;UBERON:0002780,4.36e-12,39;UBERON:0001890,4.36e-12,39;UBERON:0006240,4.36e-12,39;UBERON:0010314,1.96e-11,92;UBERON:0003528,3.96e-11,29;UBERON:0002791,3.96e-11,29;UBERON:0001893,3.96e-11,29;UBERON:0000956,2.15e-07,21;UBERON:0001869,2.15e-07,21;UBERON:0000203,2.15e-07,21 | |||
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| ||
|short_description=p2@Clta | |short_description=p2@Clta | ||
}} | }} |
Revision as of 11:26, 13 November 2012
Short description: | p2@Clta |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clta_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000170241, NM_001080384, NM_001080385, NM_001080386, NM_016760, uc008srl.1_5end |
EntrezGene: | Clta |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.13e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.13e-11 | 23 |
ectodermal cell | 8.35e-11 | 44 |
neurectodermal cell | 8.35e-11 | 44 |
electrically responsive cell | 1.03e-10 | 39 |
electrically active cell | 1.03e-10 | 39 |
neural cell | 1.41e-10 | 43 |
neuron | 5.79e-10 | 33 |
neuronal stem cell | 5.79e-10 | 33 |
neuroblast | 5.79e-10 | 33 |
electrically signaling cell | 5.79e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.72e-20 | 75 |
central nervous system | 4.10e-20 | 73 |
regional part of nervous system | 2.89e-18 | 54 |
neural tube | 1.35e-17 | 52 |
neural rod | 1.35e-17 | 52 |
future spinal cord | 1.35e-17 | 52 |
neural keel | 1.35e-17 | 52 |
neurectoderm | 2.69e-17 | 64 |
neural plate | 2.69e-17 | 64 |
presumptive neural plate | 2.69e-17 | 64 |
ectoderm-derived structure | 5.74e-16 | 95 |
ectoderm | 5.74e-16 | 95 |
presumptive ectoderm | 5.74e-16 | 95 |
brain | 6.03e-15 | 47 |
future brain | 6.03e-15 | 47 |
ecto-epithelium | 1.12e-14 | 73 |
regional part of brain | 1.48e-14 | 46 |
gray matter | 1.37e-13 | 34 |
anterior neural tube | 1.19e-12 | 40 |
pre-chordal neural plate | 1.98e-12 | 49 |
regional part of forebrain | 4.36e-12 | 39 |
forebrain | 4.36e-12 | 39 |
future forebrain | 4.36e-12 | 39 |
structure with developmental contribution from neural crest | 1.96e-11 | 92 |
brain grey matter | 3.96e-11 | 29 |
regional part of telencephalon | 3.96e-11 | 29 |
telencephalon | 3.96e-11 | 29 |
cerebral cortex | 2.15e-07 | 21 |
cerebral hemisphere | 2.15e-07 | 21 |
pallium | 2.15e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.