FFCP PHASE1:Mm9::chr8:108089857..108089882,-: Difference between revisions
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|id=chr8:108089857..108089882,- | |id=chr8:108089857..108089882,- | ||
|ontology_enrichment_celltype=CL:0000055!3.11e-13!50;CL:0000221!5.36e-13!44;CL:0000133!5.36e-13!44;CL:0002319!5.42e-13!43;CL:0000117!4.24e-11!23;CL:0000337!4.24e-11!23;CL:0000393!2.04e-10!39;CL:0000211!2.04e-10!39;CL:0000540!2.06e-10!33;CL:0000047!2.06e-10!33;CL:0000031!2.06e-10!33;CL:0000404!2.06e-10!33;CL:0000723!4.59e-07!91;CL:0000048!4.59e-07!91;CL:0000034!4.67e-07!97 | |ontology_enrichment_celltype=CL:0000055!3.11e-13!50;CL:0000221!5.36e-13!44;CL:0000133!5.36e-13!44;CL:0002319!5.42e-13!43;CL:0000117!4.24e-11!23;CL:0000337!4.24e-11!23;CL:0000393!2.04e-10!39;CL:0000211!2.04e-10!39;CL:0000540!2.06e-10!33;CL:0000047!2.06e-10!33;CL:0000031!2.06e-10!33;CL:0000404!2.06e-10!33;CL:0000723!4.59e-07!91;CL:0000048!4.59e-07!91;CL:0000034!4.67e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.75e-13,44;CL:0000133,3.75e-13,44;CL:0002319,3.79e-13,43;CL:0000117,3.15e-11,23;CL:0000337,3.15e-11,23;CL:0000393,1.55e-10,39;CL:0000211,1.55e-10,39;CL:0000540,1.56e-10,33;CL:0000047,1.56e-10,33;CL:0000031,1.56e-10,33;CL:0000404,1.56e-10,33;CL:0000723,2.51e-07,91;CL:0000048,2.51e-07,91;CL:0000034,2.79e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.17e-26!75;UBERON:0001016!2.17e-26!75;UBERON:0001017!6.52e-26!73;UBERON:0005743!6.52e-26!73;UBERON:0004121!1.27e-23!102;UBERON:0000924!1.27e-23!102;UBERON:0006601!1.27e-23!102;UBERON:0001049!2.47e-21!52;UBERON:0005068!2.47e-21!52;UBERON:0006241!2.47e-21!52;UBERON:0007135!2.47e-21!52;UBERON:0002346!2.76e-20!71;UBERON:0003075!2.76e-20!71;UBERON:0007284!2.76e-20!71;UBERON:0000033!1.30e-19!63;UBERON:0000955!5.23e-19!50;UBERON:0006238!5.23e-19!50;UBERON:0002616!1.34e-18!49;UBERON:0003056!1.56e-16!49;UBERON:0003080!2.48e-15!40;UBERON:0002780!7.47e-15!39;UBERON:0001890!7.47e-15!39;UBERON:0006240!7.47e-15!39;UBERON:0002020!2.43e-14!34;UBERON:0007811!1.12e-11!86;UBERON:0002791!2.59e-11!29;UBERON:0003528!2.59e-11!29;UBERON:0001893!2.59e-11!29;UBERON:0000153!5.39e-09!94;UBERON:0000956!9.29e-08!21;UBERON:0001869!9.29e-08!21;UBERON:0000203!9.29e-08!21;UBERON:0000025!2.93e-07!114;UBERON:0004111!3.22e-07!122;UBERON:0003076!9.27e-07!12;UBERON:0003057!9.27e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!2.17e-26!75;UBERON:0001016!2.17e-26!75;UBERON:0001017!6.52e-26!73;UBERON:0005743!6.52e-26!73;UBERON:0004121!1.27e-23!102;UBERON:0000924!1.27e-23!102;UBERON:0006601!1.27e-23!102;UBERON:0001049!2.47e-21!52;UBERON:0005068!2.47e-21!52;UBERON:0006241!2.47e-21!52;UBERON:0007135!2.47e-21!52;UBERON:0002346!2.76e-20!71;UBERON:0003075!2.76e-20!71;UBERON:0007284!2.76e-20!71;UBERON:0000033!1.30e-19!63;UBERON:0000955!5.23e-19!50;UBERON:0006238!5.23e-19!50;UBERON:0002616!1.34e-18!49;UBERON:0003056!1.56e-16!49;UBERON:0003080!2.48e-15!40;UBERON:0002780!7.47e-15!39;UBERON:0001890!7.47e-15!39;UBERON:0006240!7.47e-15!39;UBERON:0002020!2.43e-14!34;UBERON:0007811!1.12e-11!86;UBERON:0002791!2.59e-11!29;UBERON:0003528!2.59e-11!29;UBERON:0001893!2.59e-11!29;UBERON:0000153!5.39e-09!94;UBERON:0000956!9.29e-08!21;UBERON:0001869!9.29e-08!21;UBERON:0000203!9.29e-08!21;UBERON:0000025!2.93e-07!114;UBERON:0004111!3.22e-07!122;UBERON:0003076!9.27e-07!12;UBERON:0003057!9.27e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.97e-27,75;UBERON:0001017,3.05e-26,73;UBERON:0004121,1.34e-24,95;UBERON:0000924,1.34e-24,95;UBERON:0006601,1.34e-24,95;UBERON:0000073,3.80e-22,54;UBERON:0002346,4.92e-22,64;UBERON:0003075,4.92e-22,64;UBERON:0007284,4.92e-22,64;UBERON:0001049,1.33e-21,52;UBERON:0005068,1.33e-21,52;UBERON:0006241,1.33e-21,52;UBERON:0007135,1.33e-21,52;UBERON:0010371,6.76e-19,73;UBERON:0000955,3.74e-18,47;UBERON:0006238,3.74e-18,47;UBERON:0002616,9.54e-18,46;UBERON:0003056,9.79e-17,49;UBERON:0003080,1.61e-15,40;UBERON:0002780,4.94e-15,39;UBERON:0001890,4.94e-15,39;UBERON:0006240,4.94e-15,39;UBERON:0002020,1.63e-14,34;UBERON:0010314,2.36e-12,92;UBERON:0003528,1.91e-11,29;UBERON:0002791,1.91e-11,29;UBERON:0001893,1.91e-11,29;UBERON:0000956,7.65e-08,21;UBERON:0001869,7.65e-08,21;UBERON:0000203,7.65e-08,21;UBERON:0004111,3.12e-07,122;UBERON:0000025,3.47e-07,114;UBERON:0003076,7.87e-07,12;UBERON:0003057,7.87e-07,12 | |||
|phase1_expression=3.04282809499109,1.39590163055744,0.454999239389536,0.90739263392049,1.00179145989269,0.503637815735669,0.467225281191051,1.03298658753261,4.08287294239834,3.27690336850791,0.513653904676515,0.319088635981346,0.856003649656029,0.786783621770977,0,0.809901069559304,0,1.10411757875383,1.37114433605739,2.54633791078818,2.12608225377674,2.38298282882125,2.61199789138935,0.47997726838022,0.45881856213434,0.57423196411502,1.29228598847722,1.07735616342945,0,0.504060259519861,0.665191531965914,1.27006134691926,0.61506478758457,0,0.577703239502549,0.498703936075477,0.612508068787107,4.18531630736908,3.906676722619,3.14114246384279,17.6469446409304,5.46436387966757,8.25367600152961,2.14024590558481,2.23029248682932,4.9557623083654,6.25913075478431,2.18025156380447,6.15121311656521,1.94429899074283,2.2397827460058,2.87505128729943,4.36234775750115,2.17608642603403,1.34437519656986,1.54355661621568,1.43266719969378,2.57836046138721,6.47412674750713,4.7609188134483,7.60597684207415,7.45457970552091,2.66788438833342,4.94944844504769,2.96659908770092,6.3943210345149,3.29560121570245,6.53171119046643,6.11768712620018,5.67024940993101,4.83747411108179,7.7125765789027,6.62605622854841,3.30725157880376,2.77951865952885,1.83843757322004,2.20231761998777,6.12899222808901,4.14737639791857,7.25374582516066,5.6722339033494,6.25096044668112,3.90856198601933,2.25105044012672,5.19514042441154,5.00868595305235,6.54909731675874,9.87917062874093,3.3319525066601,2.19157524309678,0.289864488701678,2.58127163094416,4.0798280022465,1.07940638327563,3.24888208723835,3.13618820968135,1.82577746171277,2.55645483867087,2.07828803682295,1.41335829804136,2.11265129665021,5.13305909657271,0,0,0,0,0,1.82694207550496,1.29468941823586,2.3750742250372,3.64319186208885,2.13125834818499,0.922461989024234,1.65794904607885,1.76383060703557,0.753999547978053,2.47194967734374,0.433798070759735,0,1.13236794963186,1.32504911076236,0,0,2.34224637609238,4.1889341362691,0.510914110417183,2.15667224110656,0.599902730993408,3.43089613097275,4.94309110035915,4.11750542536764,7.66491547888473,5.73620256634512,6.90431734791892,4.36354893575076,6.16516799657479,2.24046600470696,1.36847667671102,1.51633655060205,2.10441855886474,1.82168620147785,3.21862946206862,1.98068342785884,2.26057226753573,4.42237244483631,2.8185018462667,3.46696380870997,2.32833033665114,0.646703978798527,1.51284864134255,1.05570674498369,1.7535658594206,0.834141747676794,0.348252166522167,0.823128545631774,0.995171334092466,2.1066395619397,1.28673953557358,3.12579849335152,2.07125772535502,0.703578179943289,0.180062061461015,0.473489471170421,1.18058539048442,0.462801338662135,1.16266972375204,0.804820204198858,1.28441876603886,0.329119699826961,0.492502392237286,0.729619285912702,1.46199987425332,0.658650345873152,1.47627060636409,4.20579897128254,7.9236551532049,0.330418782983798,0.528901133327089,1.49301775374664,0.696710015581316,1.80414445850931,1.21010114774006,1.33426826306922,1.14135375667535,0,1.64698954724011,0.502670417600539,1.79060824837036,1.75467678407208,0,0.432276099749388,0.199141273254367,1.70701110857774,0.799739588268102,2.25415471346161,1.22190796707189,0.775809948670503,2.52488951605147,1.83385957660346,2.06654207171443,0.941992367048249,1.85095745882701,0.889357881261447,1.16791574001266,1.17935397067922,1.34917267430912,1.42002084971952,1.4470629585145,1.2731292589071,0.287696137450811,1.62135226775035,3.0201755450689,5.75072826109418,1.11642284300551,2.18426371180192,1.76805214562978,2.69096120282868,1.4473305640901,0.923765950833023,0.947457058852424,0.977789858652155,1.18821560042632,1.40814148973101,1.34005005953453,1.6663054862021,5.46374214001837,1.41871629695572,2.87904096543407,1.75400245523236,1.14704320301017,1.20879487306127,1.73578870297814,4.52373851817817,1.63171705145613,1.96705709207614,0.827810238914197,4.81651769963376,5.97779601620236,2.62295912602681,2.01976741763498,2.2085575359138,1.17131623288992,1.72338718186239,3.34556317133573,1.78238939265915,1.41538265394416,3.23848561339915,3.50707029493574,1.97643888973262,3.85585579706168,1.41940085208269,1.95872164033981,2.60619134965722,1.81467135269789,1.32745138339963,1.21390318077491,1.209294227859,0.754420319023592,1.77181135728464,0.307435147943927,1.03371317267288,2.90826983582004,1.06949213515416,0.948110273807448,1.05418608574999,3.09406629744561,4.08527526904546,1.8006109403131,2.32845630808958,2.7863814554107,3.72414490648775,5.70780216326626,5.26556865926787,9.74287837166718,2.11204537257339,1.27099242518292,1.98475558249466,0.98931751764888,1.45317984026315,1.32688434841943,2.626191568069,0.820704498725306,2.04036585640896,5.56275906031529,1.19609616558497,1.65109494370578,0.555583582109135,0.376736914009382,0.136694227721025,0.915112692826091,2.37969801991397,2.93898049879682,3.59319931891502,0,1.10717597753397,2.03319467126849,1.51207477150522,1.25452977608681,1.52853794622324,1.61837215661785,2.0663363931334,2.35580347785627,0.777689839750757,0,1.69107881605257,1.794198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| ||
|short_description=p3@Atp6v0d1 | |short_description=p3@Atp6v0d1 | ||
}} | }} |
Revision as of 06:23, 14 November 2012
Short description: | p3@Atp6v0d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp6v0d1_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_NM_013477, uc009ndg.1_5end |
EntrezGene: | Atp6v0d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.75e-13 | 44 |
neurectodermal cell | 3.75e-13 | 44 |
neural cell | 3.79e-13 | 43 |
CNS neuron (sensu Vertebrata) | 3.15e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-11 | 23 |
electrically responsive cell | 1.55e-10 | 39 |
electrically active cell | 1.55e-10 | 39 |
neuron | 1.56e-10 | 33 |
neuronal stem cell | 1.56e-10 | 33 |
neuroblast | 1.56e-10 | 33 |
electrically signaling cell | 1.56e-10 | 33 |
somatic stem cell | 2.51e-07 | 91 |
multi fate stem cell | 2.51e-07 | 91 |
stem cell | 2.79e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.97e-27 | 75 |
central nervous system | 3.05e-26 | 73 |
ectoderm-derived structure | 1.34e-24 | 95 |
ectoderm | 1.34e-24 | 95 |
presumptive ectoderm | 1.34e-24 | 95 |
regional part of nervous system | 3.80e-22 | 54 |
neurectoderm | 4.92e-22 | 64 |
neural plate | 4.92e-22 | 64 |
presumptive neural plate | 4.92e-22 | 64 |
neural tube | 1.33e-21 | 52 |
neural rod | 1.33e-21 | 52 |
future spinal cord | 1.33e-21 | 52 |
neural keel | 1.33e-21 | 52 |
ecto-epithelium | 6.76e-19 | 73 |
brain | 3.74e-18 | 47 |
future brain | 3.74e-18 | 47 |
regional part of brain | 9.54e-18 | 46 |
pre-chordal neural plate | 9.79e-17 | 49 |
anterior neural tube | 1.61e-15 | 40 |
regional part of forebrain | 4.94e-15 | 39 |
forebrain | 4.94e-15 | 39 |
future forebrain | 4.94e-15 | 39 |
gray matter | 1.63e-14 | 34 |
structure with developmental contribution from neural crest | 2.36e-12 | 92 |
brain grey matter | 1.91e-11 | 29 |
regional part of telencephalon | 1.91e-11 | 29 |
telencephalon | 1.91e-11 | 29 |
cerebral cortex | 7.65e-08 | 21 |
cerebral hemisphere | 7.65e-08 | 21 |
pallium | 7.65e-08 | 21 |
anatomical conduit | 3.12e-07 | 122 |
tube | 3.47e-07 | 114 |
posterior neural tube | 7.87e-07 | 12 |
chordal neural plate | 7.87e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.