CL:0002612: Difference between revisions
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|has_quality= | |has_quality= | ||
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|part_of= | |part_of=UBERON:0002257 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:04, 27 June 2012
| Name: | neuron of the ventral spinal cord |
|---|---|
| Namespace: | cell |
| Definition: | "A neuron of the ventral spinal cord." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T07:46:03Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000117(CNS neuron (sensu Vertebrata)) |
|---|---|
| part_of: | UBERON:0002257(ventral horn of spinal cord) |
Children
| derives from: | FF:0000207 (mouse neuron of the ventral spinal cord sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11648-122E1 (Mouse Neurons - ventral spinal cord, donor3)
- 11725-123D6 (Mouse Neurons - ventral spinal cord, donor1)
- 11743-123F6 (Mouse Neurons - ventral spinal cord, donor2)
Mouse (Mus musculus)
- 11648-122E1 (Mouse Neurons - ventral spinal cord, donor3)
- 11725-123D6 (Mouse Neurons - ventral spinal cord, donor1)
- 11743-123F6 (Mouse Neurons - ventral spinal cord, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002612 (neuron of the ventral spinal cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.33e-65 | FFCP PHASE2:Mm9::chr11:96148092..96148105,+#_9645099b8561b1892ea2e0b639b67f99 | p@chr11:96148092..96148105, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr11:96148092..96148105,+#_9645099b8561b1892ea2e0b639b67f99 | p@chr11:96148092..96148105, + |
| 2.21e-65 | FFCP PHASE2:Mm9::chr7:94732458..94732467,+#_a926a64447ed98e921a572f9b6e21651 | p13@Grm5 |
| 2.21e-65 | FFCP PHASE1:Mm9::chr7:94732458..94732467,+#_a926a64447ed98e921a572f9b6e21651 | p13@Grm5 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:23665663..23665666,+#_4123cea3a0ff324fe57d0a0e7b2092f6 | p@chr5:23665663..23665666, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:23665663..23665666,+#_4123cea3a0ff324fe57d0a0e7b2092f6 | p@chr5:23665663..23665666, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr5:77527885..77527900,+#_737c8205c3e54d215ccdf99fed1abbfc | p@chr5:77527885..77527900, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr5:77527885..77527900,+#_737c8205c3e54d215ccdf99fed1abbfc | p@chr5:77527885..77527900, + |
| 7.35e-53 | FFCP PHASE2:Mm9::chr12:47797986..47798011,-#_d8abc0a6cf2e40a7f9f4831a29c42a92 | p@chr12:47797986..47798011, - |
| 7.35e-53 | FFCP PHASE1:Mm9::chr12:47797986..47798011,-#_d8abc0a6cf2e40a7f9f4831a29c42a92 | p@chr12:47797986..47798011, - |
| 1.1e-52 | FFCP PHASE1:Mm9::chr14:33413108..33413118,+#_21d82753bf3a722d88144ce159e67018 | p3@Prrxl1 |
| 1.1e-52 | FFCP PHASE1:Mm9::chr18:84268738..84268777,-#_21d82753bf3a722d88144ce159e67018 | p@chr18:84268738..84268777, - |
| 1.1e-52 | FFCP PHASE2:Mm9::chr14:33413108..33413118,+#_21d82753bf3a722d88144ce159e67018 | p3@Prrxl1 |
| 1.1e-52 | FFCP PHASE2:Mm9::chr18:84268738..84268777,-#_21d82753bf3a722d88144ce159e67018 | p@chr18:84268738..84268777, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr11:96608388..96608420,+#_4cff3db22ffd7cccec642c19009e8bb7 | p@chr11:96608388..96608420, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr10:101630272..101630276,+#_4cff3db22ffd7cccec642c19009e8bb7 | p@chr10:101630272..101630276, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr11:96608388..96608420,+#_4cff3db22ffd7cccec642c19009e8bb7 | p@chr11:96608388..96608420, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr10:101630272..101630276,+#_4cff3db22ffd7cccec642c19009e8bb7 | p@chr10:101630272..101630276, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr11:96143545..96143556,+#_6b5934e1d7128030b5cae3820eb01854 | p6@Hoxb8 |
| 1.66e-44 | FFCP PHASE2:Mm9::chr11:96143545..96143556,+#_6b5934e1d7128030b5cae3820eb01854 | p6@Hoxb8 |
| 1.17e-38 | FFCP PHASE2:Mm9::chr2:74530108..74530131,+#_384137167319a57758855de456d76aa7 | p@chr2:74530108..74530131, + |
| 1.17e-38 | FFCP PHASE1:Mm9::chr2:74530108..74530131,+#_384137167319a57758855de456d76aa7 | p@chr2:74530108..74530131, + |
| 2.09e-38 | FFCP PHASE1:Mm9::chr11:96160098..96160112,+#_7af1a0069f64a3c1353ce8f402d75ebb | p8@Hoxb6 |
| 2.09e-38 | FFCP PHASE2:Mm9::chr11:96160098..96160112,+#_7af1a0069f64a3c1353ce8f402d75ebb | p8@Hoxb6 |
| 3.73e-38 | FFCP PHASE1:Mm9::chr11:96132544..96132553,+#_589ca8f5be5c01f8f1002a212feeded9 | p6@Hoxb9 |
| 3.73e-38 | FFCP PHASE2:Mm9::chr2:74529917..74529926,+#_589ca8f5be5c01f8f1002a212feeded9 | p5@Hoxd10 |
| 3.73e-38 | FFCP PHASE1:Mm9::chr2:74529917..74529926,+#_589ca8f5be5c01f8f1002a212feeded9 | p5@Hoxd10 |
| 3.73e-38 | FFCP PHASE2:Mm9::chr11:96132544..96132553,+#_589ca8f5be5c01f8f1002a212feeded9 | p6@Hoxb9 |
| 2.8e-37 | FFCP PHASE1:Mm9::chr7:6659121..6659133,-#_83d6a7545b05fb9a4a05482ed15a852b | p@chr7:6659121..6659133, - |
| 2.8e-37 | FFCP PHASE2:Mm9::chr7:6659121..6659133,-#_83d6a7545b05fb9a4a05482ed15a852b | p@chr7:6659121..6659133, - |
| 3.67e-34 | FFCP PHASE1:Mm9::chr11:96132456..96132467,+#_2c22e665a57d86c57a068b02c15324b2 | p4@Hoxb9 |
| 3.67e-34 | FFCP PHASE2:Mm9::chr11:96132456..96132467,+#_2c22e665a57d86c57a068b02c15324b2 | p4@Hoxb9 |
| 7.89e-34 | FFCP PHASE1:Mm9::chr12:110843236..110843239,+#_0e22a6fac25fceb80768d4382639854e | p@chr12:110843236..110843239, + |
| 7.89e-34 | FFCP PHASE2:Mm9::chr12:110843236..110843239,+#_0e22a6fac25fceb80768d4382639854e | p@chr12:110843236..110843239, + |
| 5.97e-33 | FFCP PHASE1:Mm9::chr7:57165602..57165612,+#_303c5885d0c71fbb62ecdfe65e08d2fd | p6@Slc6a5 |
| 5.97e-33 | FFCP PHASE2:Mm9::chr7:57165602..57165612,+#_303c5885d0c71fbb62ecdfe65e08d2fd | p6@Slc6a5 |
| 1.16e-30 | FFCP PHASE2:Mm9::chr11:33103589..33103599,-#_c7e2ffcfec4d06bc8cc53c884967e023 | p3@Tlx3 |
| 1.16e-30 | FFCP PHASE1:Mm9::chr11:33103589..33103599,-#_c7e2ffcfec4d06bc8cc53c884967e023 | p3@Tlx3 |
| 1.83e-30 | FFCP PHASE1:Mm9::chr11:96146541..96146544,+#_523c703df16ea8bab0671592c13fe3d4 | p@chr11:96146541..96146544, + |
| 1.83e-30 | FFCP PHASE2:Mm9::chr11:96146541..96146544,+#_523c703df16ea8bab0671592c13fe3d4 | p@chr11:96146541..96146544, + |
| 4.03e-30 | FFCP PHASE2:Mm9::chr8:33760116..33760119,-#_156a22c9e00fea737a7c711754b066db | p@chr8:33760116..33760119, - |
| 4.03e-30 | FFCP PHASE1:Mm9::chr8:33760116..33760119,-#_156a22c9e00fea737a7c711754b066db | p@chr8:33760116..33760119, - |
| 5.64e-30 | FFCP PHASE1:Mm9::chr5:89666281..89666294,+#_70b68a16154d603dc837e7d80530472c | p@chr5:89666281..89666294, + |
| 5.64e-30 | FFCP PHASE2:Mm9::chr5:89666281..89666294,+#_70b68a16154d603dc837e7d80530472c | p@chr5:89666281..89666294, + |
| 5.64e-30 | FFCP PHASE1:Mm9::chr12:47886256..47886259,-#_70b68a16154d603dc837e7d80530472c | p@chr12:47886256..47886259, - |
| 5.64e-30 | FFCP PHASE2:Mm9::chr12:47886256..47886259,-#_70b68a16154d603dc837e7d80530472c | p@chr12:47886256..47886259, - |
| 5.7e-30 | FFCP PHASE2:Mm9::chr11:104171794..104171805,+#_4a8089440ee8d94ba1ef81a76299b3f6 | p@chr11:104171794..104171805, + |
| 5.7e-30 | FFCP PHASE1:Mm9::chr11:104171794..104171805,+#_4a8089440ee8d94ba1ef81a76299b3f6 | p@chr11:104171794..104171805, + |
| 7.89e-30 | FFCP PHASE2:Mm9::chr4:58340140..58340151,+#_7c2e4203e1367df234ed1d3384e3b7ad | p@chr4:58340140..58340151, + |
| 7.89e-30 | FFCP PHASE1:Mm9::chr4:58340140..58340151,+#_7c2e4203e1367df234ed1d3384e3b7ad | p@chr4:58340140..58340151, + |
| 1.4e-29 | FFCP PHASE2:Mm9::chr4:150371190..150371197,+#_ead2570d921b07e2d56dd110cd86c979 | p1@Uts2 |
| 1.4e-29 | FFCP PHASE1:Mm9::chr14:94197171..94197177,-#_ead2570d921b07e2d56dd110cd86c979 | p@chr14:94197171..94197177, - |
| 1.4e-29 | FFCP PHASE1:Mm9::chr4:150371190..150371197,+#_ead2570d921b07e2d56dd110cd86c979 | p1@Uts2 |
| 1.4e-29 | FFCP PHASE2:Mm9::chr14:94197171..94197177,-#_ead2570d921b07e2d56dd110cd86c979 | p@chr14:94197171..94197177, - |
| 1.54e-29 | FFCP PHASE1:Mm9::chr8:84578004..84578010,+#_f925e9ce637815351db2955e37790349 | p@chr8:84578004..84578010, + |
| 1.54e-29 | FFCP PHASE2:Mm9::chr8:84578004..84578010,+#_f925e9ce637815351db2955e37790349 | p@chr8:84578004..84578010, + |
| 1.11e-27 | FFCP PHASE1:Mm9::chr2:70399563..70399583,+#_477bc43f8d4ba48d1d94e5b739901582 | p@chr2:70399563..70399583, + |
| 1.11e-27 | FFCP PHASE2:Mm9::chr5:24032551..24032557,-#_477bc43f8d4ba48d1d94e5b739901582 | p1@Gbx1 |
| 1.11e-27 | FFCP PHASE2:Mm9::chr2:70399563..70399583,+#_477bc43f8d4ba48d1d94e5b739901582 | p@chr2:70399563..70399583, + |
| 1.11e-27 | FFCP PHASE1:Mm9::chr5:24032551..24032557,-#_477bc43f8d4ba48d1d94e5b739901582 | p1@Gbx1 |
| 2.06e-27 | FFCP PHASE1:Mm9::chrX:98516253..98516269,+#_8b8d3eddd67df4123caf6e91b0781be1 | p@chrX:98516253..98516269, + |
| 2.06e-27 | FFCP PHASE2:Mm9::chrX:98516253..98516269,+#_8b8d3eddd67df4123caf6e91b0781be1 | p@chrX:98516253..98516269, + |
| 3.1e-27 | FFCP PHASE2:Mm9::chr7:144388046..144388053,-#_b4089d3bb42c049d948728c7dde56df9 | p@chr7:144388046..144388053, - |
| 3.1e-27 | FFCP PHASE1:Mm9::chr13:97841582..97841592,+#_b4089d3bb42c049d948728c7dde56df9 | p5@Fam169a |
| 3.1e-27 | FFCP PHASE1:Mm9::chr7:144388046..144388053,-#_b4089d3bb42c049d948728c7dde56df9 | p@chr7:144388046..144388053, - |
| 3.1e-27 | FFCP PHASE2:Mm9::chr13:97841582..97841592,+#_b4089d3bb42c049d948728c7dde56df9 | p5@Fam169a |
| 4.66e-27 | FFCP PHASE1:Mm9::chr10:59862497..59862520,+#_cf15ac2eaba6e9c255f886cb74cdb7e8 | p2@Gm17455 |
| 4.66e-27 | FFCP PHASE2:Mm9::chr10:59862497..59862520,+#_cf15ac2eaba6e9c255f886cb74cdb7e8 | p2@Gm17455 |
| 6.99e-27 | FFCP PHASE2:Mm9::chr2:180625404..180625417,+#_4d25b7c5f413e26d8e4d9a12417cdfd1 | p@chr2:180625404..180625417, + |
| 6.99e-27 | FFCP PHASE1:Mm9::chr2:180625404..180625417,+#_4d25b7c5f413e26d8e4d9a12417cdfd1 | p@chr2:180625404..180625417, + |
| 8.55e-27 | FFCP PHASE1:Mm9::chr7:57165453..57165473,+#_67a87400edd818e965d7eb348b787df5 | p3@Slc6a5 |
| 8.55e-27 | FFCP PHASE2:Mm9::chr7:57165453..57165473,+#_67a87400edd818e965d7eb348b787df5 | p3@Slc6a5 |
| 2.12e-25 | FFCP PHASE1:Mm9::chr2:135885511..135885540,+#_c8f8e50b1c108e318dcdc7bad1725b02 | p@chr2:135885511..135885540, + |
| 2.12e-25 | FFCP PHASE2:Mm9::chr2:135885511..135885540,+#_c8f8e50b1c108e318dcdc7bad1725b02 | p@chr2:135885511..135885540, + |
| 2.56e-25 | FFCP PHASE1:Mm9::chr13:97419784..97419792,-#_2ad9f48a9168856cedbb2b0e274dff23 | p@chr13:97419784..97419792, - |
| 2.56e-25 | FFCP PHASE2:Mm9::chr13:97419784..97419792,-#_2ad9f48a9168856cedbb2b0e274dff23 | p@chr13:97419784..97419792, - |
| 2.56e-25 | FFCP PHASE2:Mm9::chr2:135883447..135883459,+#_2ad9f48a9168856cedbb2b0e274dff23 | p12@6330527O06Rik |
| 2.56e-25 | FFCP PHASE1:Mm9::chr2:135883447..135883459,+#_2ad9f48a9168856cedbb2b0e274dff23 | p12@6330527O06Rik |
| 9.4e-25 | FFCP PHASE2:Mm9::chr7:57165576..57165593,+#_668d6ffe2d5a3d030e3c9081acbbb85b | p5@Slc6a5 |
| 9.4e-25 | FFCP PHASE2:Mm9::chr15:102355046..102355050,-#_668d6ffe2d5a3d030e3c9081acbbb85b | p1@Npff |
| 9.4e-25 | FFCP PHASE1:Mm9::chr7:57165576..57165593,+#_668d6ffe2d5a3d030e3c9081acbbb85b | p5@Slc6a5 |
| 9.4e-25 | FFCP PHASE1:Mm9::chr15:102355046..102355050,-#_668d6ffe2d5a3d030e3c9081acbbb85b | p1@Npff |
| 1.13e-24 | FFCP PHASE2:Mm9::chr5:65522238..65522249,+#_cb58e0a672d58e0a65bdf374c513c6ba | p9@Klhl5 |
| 1.13e-24 | FFCP PHASE1:Mm9::chr5:65522238..65522249,+#_cb58e0a672d58e0a65bdf374c513c6ba | p9@Klhl5 |
| 1.74e-24 | FFCP PHASE1:Mm9::chr7:64495660..64495664,-#_ecea4d24a70bc281453e1d60a9712934 | p@chr7:64495660..64495664, - |
| 1.74e-24 | FFCP PHASE2:Mm9::chr7:64495660..64495664,-#_ecea4d24a70bc281453e1d60a9712934 | p@chr7:64495660..64495664, - |
| 2.28e-24 | FFCP PHASE1:Mm9::chr2:70053872..70053879,+#_e3eb06d5e7cf06d16d8658b19de7887a | p@chr2:70053872..70053879, + |
| 2.28e-24 | FFCP PHASE2:Mm9::chr2:70053872..70053879,+#_e3eb06d5e7cf06d16d8658b19de7887a | p@chr2:70053872..70053879, + |
| 2.36e-24 | FFCP PHASE2:Mm9::chr7:57165629..57165651,+#_8bf73bb44cdadff56302256450bb292e | p4@Slc6a5 |
| 2.36e-24 | FFCP PHASE1:Mm9::chr7:57165629..57165651,+#_8bf73bb44cdadff56302256450bb292e | p4@Slc6a5 |
| 2.99e-24 | FFCP PHASE2:Mm9::chr1:66486342..66486351,+#_ced56994f3f6766934efa6fb893f9429 | p@chr1:66486342..66486351, + |
| 2.99e-24 | FFCP PHASE1:Mm9::chr11:33103551..33103561,-#_ced56994f3f6766934efa6fb893f9429 | p4@Tlx3 |
| 2.99e-24 | FFCP PHASE1:Mm9::chr1:66486342..66486351,+#_ced56994f3f6766934efa6fb893f9429 | p@chr1:66486342..66486351, + |
| 2.99e-24 | FFCP PHASE2:Mm9::chr7:67121440..67121451,-#_ced56994f3f6766934efa6fb893f9429 | p@chr7:67121440..67121451, - |
| 2.99e-24 | FFCP PHASE2:Mm9::chr11:33103551..33103561,-#_ced56994f3f6766934efa6fb893f9429 | p4@Tlx3 |
| 2.99e-24 | FFCP PHASE1:Mm9::chr7:67121440..67121451,-#_ced56994f3f6766934efa6fb893f9429 | p@chr7:67121440..67121451, - |
| 3.91e-24 | FFCP PHASE2:Mm9::chr12:85023868..85023879,+#_1c503aa2de7d1797e98b576a202e7058 | p@chr12:85023868..85023879, + |
| 3.91e-24 | FFCP PHASE1:Mm9::chr12:85023868..85023879,+#_1c503aa2de7d1797e98b576a202e7058 | p@chr12:85023868..85023879, + |
| 4.08e-24 | FFCP PHASE2:Mm9::chr11:83696202..83696230,+#_e9dce254050c201ac4de6d85b45ce258 | p@chr11:83696202..83696230, + |
| 4.08e-24 | FFCP PHASE1:Mm9::chr11:83696202..83696230,+#_e9dce254050c201ac4de6d85b45ce258 | p@chr11:83696202..83696230, + |
