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{{UBERON
{{UBERON
|id=UBERON:0005893
|alt_id=
|name=leg bone
|namespace=
|def="A bone that is part of the region of the hindlimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia. Counter-examples: any foot phalanx" [UBERON:cjm]
|xref=MA:0000670;;MESH:A.02.835.232.500
|is_a=UBERON:0003464
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A bone that is part of the region of the hindlimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia. Counter-examples: any foot phalanx" [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005893
|is_a=UBERON:0003464
|is_obsolete=
|located_in=
|located_in=
|name=leg bone
|namespace=
|obo_creation_date=
|part_of=UBERON:0000978
|part_of=UBERON:0000978
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MA:0000670;;MESH:A.02.835.232.500
}}
}}

Revision as of 11:38, 12 September 2014

Name:leg bone
Definition:"A bone that is part of the region of the hindlimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia. Counter-examples: any foot phalanx" [UBERON:cjm]
Xrefs:
links:

MA:0000670

MESH:A.02.835.232.500

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003464(hindlimb bone)
part_of:UBERON:0000978(leg)



Children

is a:UBERON:0003826 (upper leg bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005893 (leg bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_b5278dd1a5982a8d218568a82dc869b1p26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_b5278dd1a5982a8d218568a82dc869b1p26@Myo18a
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_55859134e9fc6af1046b060d7b29da13p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_55859134e9fc6af1046b060d7b29da13p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_55859134e9fc6af1046b060d7b29da13p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_55859134e9fc6af1046b060d7b29da13p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_55859134e9fc6af1046b060d7b29da13p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_55859134e9fc6af1046b060d7b29da13p@chr9:21934585..21934591, -
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_330ba55d4468568142b33c645c93c782p@chr6:51525810..51525817, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_330ba55d4468568142b33c645c93c782p@chr6:51525810..51525817, +
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_4d99345afedd3bedcda0d009899cd1e0p@chr19:4876870..4876880, -
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_4d99345afedd3bedcda0d009899cd1e0p@chr19:4876870..4876880, -
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_a3e10c7ff3a168060e705bca4f31f7aap@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_a3e10c7ff3a168060e705bca4f31f7aap@chr16:24096441..24096449, +
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_a3e10c7ff3a168060e705bca4f31f7aap@chr1:174140324..174140335, -
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_a3e10c7ff3a168060e705bca4f31f7aap@chr1:174140324..174140335, -
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_a3e10c7ff3a168060e705bca4f31f7aap@chr11:67063327..67063335, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_a3e10c7ff3a168060e705bca4f31f7aap@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_a3e10c7ff3a168060e705bca4f31f7aap@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_a3e10c7ff3a168060e705bca4f31f7aap@chr6:4490674..4490679, +
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_d85c6218ac9a04ecbc824e58f73b79a8p@chr1:174143249..174143260, -
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_d85c6218ac9a04ecbc824e58f73b79a8p@chr1:174143249..174143260, -
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_7698c529ee19cbc7dbd8a7170168e8aep@chr6:51525869..51525891, +
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_7698c529ee19cbc7dbd8a7170168e8aep@chr6:51525869..51525891, +
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_4621f2a74c473a784abf761eda91604dp3@Asb16
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_4621f2a74c473a784abf761eda91604dp3@Asb16
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_ea94bbeaa207dd858b5b7b8f18660cf3p@chr7:133604286..133604297, -
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_ea94bbeaa207dd858b5b7b8f18660cf3p@chr7:133604286..133604297, -
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_804f05fb6e2a203aba8219f5044bc28ap5@Pla2g5
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_804f05fb6e2a203aba8219f5044bc28ap5@Pla2g5
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_2e495b8556f46d9639e4019bf4d32237p2@uc009mdq.1
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_2e495b8556f46d9639e4019bf4d32237p2@uc009mdq.1
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_2035856236373c37494fe92d059877e2p3@Mmp9
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_2035856236373c37494fe92d059877e2p3@Mmp9
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_504950468dda9d78746adecebf68909ap2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_504950468dda9d78746adecebf68909ap2@Oscar
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_504950468dda9d78746adecebf68909ap@chr1:166815111..166815121, -
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_504950468dda9d78746adecebf68909ap@chr1:166815111..166815121, -
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_da64c18fe38e372bd47929eb73e98db4p4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_da64c18fe38e372bd47929eb73e98db4p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_da64c18fe38e372bd47929eb73e98db4p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_da64c18fe38e372bd47929eb73e98db4p4@Lipc
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_3b8fc77a9de19fc1f553d68cd2b0e75ep6@Sp7
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_3b8fc77a9de19fc1f553d68cd2b0e75ep6@Sp7
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_04400146a475c2fb5b449a19ab8ffb2ap@chr8:126415826..126415839, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_04400146a475c2fb5b449a19ab8ffb2ap@chr8:126415826..126415839, +
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_04400146a475c2fb5b449a19ab8ffb2ap@chr18:76271498..76271508, +
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_04400146a475c2fb5b449a19ab8ffb2ap@chr18:76271498..76271508, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_0a265d39b43c91cc3001fac5d8eb5293p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_0a265d39b43c91cc3001fac5d8eb5293p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_4cee575818a579c41b755857d9513196p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_4cee575818a579c41b755857d9513196p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_4cee575818a579c41b755857d9513196p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_4cee575818a579c41b755857d9513196p@chr15:58649683..58649688, -
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_d61d7b2b227cde3759df0e6f2ac5ad21p@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_d61d7b2b227cde3759df0e6f2ac5ad21p@chr7:133590998..133591009, -
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_58cc4f1d507f08258826c97f2c4c1c21p2@Myoz3
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_58cc4f1d507f08258826c97f2c4c1c21p2@Myoz3
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_12c51d0818ac0bff892a4d8e9d6a6ec5p2@Myh4
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_12c51d0818ac0bff892a4d8e9d6a6ec5p2@Myh4
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_406e927588483b76d25552c0e679d5f4p@chr1:57155729..57155740, -
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_406e927588483b76d25552c0e679d5f4p@chr1:57155729..57155740, -
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_09e99e3f431afc3c4f912ee2b3285fd4p@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_09e99e3f431afc3c4f912ee2b3285fd4p1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_09e99e3f431afc3c4f912ee2b3285fd4p@chr11:67056544..67056589, -
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_09e99e3f431afc3c4f912ee2b3285fd4p1@Msmp
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_d167062aa030f329cfe42ca6693e80edp@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_d167062aa030f329cfe42ca6693e80edp@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_d167062aa030f329cfe42ca6693e80edp@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_d167062aa030f329cfe42ca6693e80edp@chr6:90552017..90552024, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_81800475498cebe18fa14277c04801cfp@chr6:34436258..34436292, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_81800475498cebe18fa14277c04801cfp@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_46b49d499201ad306858e650fe02c639p@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_46b49d499201ad306858e650fe02c639p@chr11:67069796..67069817, -
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_95732ad3005cc8e9a00767bd69f20a61p@chr8:107702369..107702386, +
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_95732ad3005cc8e9a00767bd69f20a61p@chr8:107702369..107702386, +
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_b051916cc392b69cb3b068c3089e954dp1@Siglec15
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_b051916cc392b69cb3b068c3089e954dp1@Siglec15
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_e90b3fbb08e90e41d796e8617e0828cap6@Atp2a1
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_e90b3fbb08e90e41d796e8617e0828cap6@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_7b5104086c9d77c956f4a0b86735b590p7@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_7b5104086c9d77c956f4a0b86735b590p7@Atp2a1
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_3d4b6a2c3d1d2416285ec076c791dfd6p@chr7:133592162..133592188, -
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_3d4b6a2c3d1d2416285ec076c791dfd6p@chr7:133600635..133600663, +
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_3d4b6a2c3d1d2416285ec076c791dfd6p@chr7:133600635..133600663, +
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_3d4b6a2c3d1d2416285ec076c791dfd6p@chr7:133592162..133592188, -
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_a053be5684bde67da6ea1212d94b923ap4@Sgca
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_a053be5684bde67da6ea1212d94b923ap4@Sgca
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_8dc3386f11f834c33dd0da533ffa86f6p1@Mepe
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_8dc3386f11f834c33dd0da533ffa86f6p1@Mepe
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_d792360bdb255ed9d821553969fd6eb5p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_d792360bdb255ed9d821553969fd6eb5p2@Tm4sf19
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_d792360bdb255ed9d821553969fd6eb5p2@Tm4sf19
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_d792360bdb255ed9d821553969fd6eb5p@chr12:81581216..81581231, +
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_00ffd75f325acd6ccbdc0e6a5d659568p5@Col11a2
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_00ffd75f325acd6ccbdc0e6a5d659568p5@Col11a2
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_00ffd75f325acd6ccbdc0e6a5d659568p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_00ffd75f325acd6ccbdc0e6a5d659568p@chr15:97806574..97806585, -
1.36e-25FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_1ede5630d220e347549f42ea10f08859p@chr2:180890942..180890956, -
1.36e-25FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_1ede5630d220e347549f42ea10f08859p2@Siglec15

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