FFCP PHASE1:Hg19::chr1:25889292..25889305,+: Difference between revisions
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|ontology_enrichment_development_v019=CL:0000790;1.44e-51;18!CL:0000051;1.02e-10;53 | |ontology_enrichment_development_v019=CL:0000790;1.44e-51;18!CL:0000051;1.02e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.40e-30,15;UBERON:0000179,5.40e-30,15;UBERON:0000463,5.40e-30,15;UBERON:0002370,1.45e-07,4;UBERON:0005058,1.45e-07,4;UBERON:0009113,1.45e-07,4;UBERON:0003295,1.45e-07,4;UBERON:0005562,1.45e-07,4;UBERON:0004177,3.26e-07,7;UBERON:0005057,3.26e-07,7;UBERON:0002193,5.01e-07,108 | |||
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|short_description=p3@LDLRAP1 | |short_description=p3@LDLRAP1 | ||
}} | }} |
Revision as of 01:55, 16 November 2012
Short description: | p3@LDLRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LDLRAP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc009vrx.2_5end |
EntrezGene: | LDLRAP1 |
HGNC: | 18640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.75e-51 | 18 |
alpha-beta T cell | 1.75e-51 | 18 |
immature T cell | 1.75e-51 | 18 |
mature T cell | 1.75e-51 | 18 |
immature alpha-beta T cell | 1.75e-51 | 18 |
CD8-positive, alpha-beta T cell | 3.72e-36 | 11 |
T cell | 8.66e-36 | 25 |
pro-T cell | 8.66e-36 | 25 |
lymphoid lineage restricted progenitor cell | 5.64e-21 | 52 |
lymphocyte | 1.76e-20 | 53 |
common lymphoid progenitor | 1.76e-20 | 53 |
CD4-positive, alpha-beta T cell | 3.73e-20 | 6 |
nongranular leukocyte | 1.48e-11 | 115 |
naive T cell | 4.57e-11 | 3 |
single nucleate cell | 1.73e-10 | 3 |
mononuclear cell | 1.73e-10 | 3 |
natural killer cell | 6.10e-10 | 3 |
pro-NK cell | 6.10e-10 | 3 |
leukocyte | 7.18e-09 | 136 |
regulatory T cell | 5.86e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.86e-08 | 2 |
naive regulatory T cell | 5.86e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 7.41e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 5.40e-30 | 15 |
haemolymphatic fluid | 5.40e-30 | 15 |
organism substance | 5.40e-30 | 15 |
thymus | 1.45e-07 | 4 |
hemolymphoid system gland | 1.45e-07 | 4 |
thymic region | 1.45e-07 | 4 |
pharyngeal gland | 1.45e-07 | 4 |
thymus primordium | 1.45e-07 | 4 |
hemopoietic organ | 3.26e-07 | 7 |
immune organ | 3.26e-07 | 7 |
hemolymphoid system | 5.01e-07 | 108 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.