FFCP PHASE1:Hg19::chr1:94526344..94526353,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!2.57e-26!24;CL:0000115!2.10e-20!35;CL:0002144!1.03e-15!3;CL:0000071!1.10e-15!18;CL:0002546!1.10e-15!18;CL:0002078!1.23e-15!44;CL:0000064!3.67e-14!3;CL:0005012!3.67e-14!3;CL:0000067!3.67e-14!3;CL:0002304!3.67e-14!3;CL:0005020!2.26e-13!6;CL:0002138!2.26e-13!6;CL:0005022!2.26e-13!6;CL:0000213!2.01e-11!57;CL:0000215!2.01e-11!57;CL:1000413!2.96e-08!9 | |ontology_enrichment_celltype=CL:0002139!2.57e-26!24;CL:0000115!2.10e-20!35;CL:0002144!1.03e-15!3;CL:0000071!1.10e-15!18;CL:0002546!1.10e-15!18;CL:0002078!1.23e-15!44;CL:0000064!3.67e-14!3;CL:0005012!3.67e-14!3;CL:0000067!3.67e-14!3;CL:0002304!3.67e-14!3;CL:0005020!2.26e-13!6;CL:0002138!2.26e-13!6;CL:0005022!2.26e-13!6;CL:0000213!2.01e-11!57;CL:0000215!2.01e-11!57;CL:1000413!2.96e-08!9 | ||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p4@ABCA4 | |short_description=p4@ABCA4 | ||
}} | }} |
Revision as of 21:42, 19 November 2012
Short description: | p4@ABCA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ABCA4_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -57bp_to_U66691_5end |
EntrezGene: | ABCA4 |
HGNC: | 34 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 7.21e-85 | 3 |
lymphangioblast | 7.48e-43 | 6 |
endothelial cell of lymphatic vessel | 7.48e-43 | 6 |
vascular lymphangioblast | 7.48e-43 | 6 |
endothelial cell of vascular tree | 1.86e-42 | 24 |
endothelial cell | 1.73e-38 | 36 |
meso-epithelial cell | 6.99e-31 | 45 |
lining cell | 4.74e-24 | 58 |
barrier cell | 4.74e-24 | 58 |
blood vessel endothelial cell | 6.53e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.53e-15 | 18 |
mesodermal cell | 1.14e-11 | 121 |
glomerular endothelial cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 7.21e-85 | 3 |
endothelium of capillary | 7.21e-85 | 3 |
capillary | 7.21e-85 | 3 |
lymphatic vessel | 2.19e-32 | 8 |
lymph vasculature | 2.19e-32 | 8 |
lymphatic part of lymphoid system | 2.19e-32 | 8 |
lymphoid system | 4.28e-26 | 10 |
vessel | 3.04e-15 | 68 |
blood vessel endothelium | 6.53e-15 | 18 |
endothelium | 6.53e-15 | 18 |
cardiovascular system endothelium | 6.53e-15 | 18 |
vasculature | 2.52e-13 | 78 |
vascular system | 2.52e-13 | 78 |
simple squamous epithelium | 2.44e-12 | 22 |
squamous epithelium | 6.05e-11 | 25 |
cardiovascular system | 1.35e-09 | 109 |
circulatory system | 2.41e-09 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.