FFCP PHASE1:Hg19::chr7:128379390..128379447,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!7.64e-41!180;CL:0000057!1.46e-21!75;CL:0000680!2.50e-17!57;CL:0000056!2.50e-17!57;CL:0000355!2.50e-17!57;CL:0000187!3.68e-16!54;CL:0000222!6.41e-16!119;CL:0000220!7.28e-14!246;CL:0002321!8.81e-14!248;CL:0000393!1.26e-13!60;CL:0000211!1.26e-13!60;CL:0000548!1.27e-13!679;CL:0000004!1.27e-13!679;CL:0000255!1.27e-13!679;CL:0000192!1.33e-13!42;CL:0000514!1.33e-13!42;CL:0000183!1.58e-13!59;CL:0000012!1.12e-12!682;CL:0000359!1.32e-12!32;CL:0000144!5.62e-11!625;CL:0002620!6.87e-11!23;CL:0002371!3.15e-09!591;CL:0002334!3.15e-07!12 | |ontology_enrichment_celltype=CL:0000055!7.64e-41!180;CL:0000057!1.46e-21!75;CL:0000680!2.50e-17!57;CL:0000056!2.50e-17!57;CL:0000355!2.50e-17!57;CL:0000187!3.68e-16!54;CL:0000222!6.41e-16!119;CL:0000220!7.28e-14!246;CL:0002321!8.81e-14!248;CL:0000393!1.26e-13!60;CL:0000211!1.26e-13!60;CL:0000548!1.27e-13!679;CL:0000004!1.27e-13!679;CL:0000255!1.27e-13!679;CL:0000192!1.33e-13!42;CL:0000514!1.33e-13!42;CL:0000183!1.58e-13!59;CL:0000012!1.12e-12!682;CL:0000359!1.32e-12!32;CL:0000144!5.62e-11!625;CL:0002620!6.87e-11!23;CL:0002371!3.15e-09!591;CL:0002334!3.15e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.81e-12;32!CL:0002620;6.92e-11;23!CL:0000192;5.29e-10;43!CL:0000134;5.51e-10;55!CL:0000048;3.65e-09;58!CL:0000187;4.25e-09;55!CL:0000057;4.91e-09;73!CL:0000723;6.07e-09;61!CL:0002320;4.90e-08;188!CL:0000393;1.31e-07;61!CL:0000211;1.31e-07;61!CL:0002334;3.14e-07;12!CL:0000499;6.97e-07;28 | |ontology_enrichment_celltype_v019=CL:0000359;9.81e-12;32!CL:0002620;6.92e-11;23!CL:0000192;5.29e-10;43!CL:0000134;5.51e-10;55!CL:0000048;3.65e-09;58!CL:0000187;4.25e-09;55!CL:0000057;4.91e-09;73!CL:0000723;6.07e-09;61!CL:0002320;4.90e-08;188!CL:0000393;1.31e-07;61!CL:0000211;1.31e-07;61!CL:0002334;3.14e-07;12!CL:0000499;6.97e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.48e-22,76;CL:0000680,1.43e-17,58;CL:0000056,1.43e-17,58;CL:0000355,1.43e-17,58;CL:0000187,2.11e-16,55;CL:0000222,6.30e-16,121;CL:0000393,7.22e-14,61;CL:0000211,7.22e-14,61;CL:0002321,7.22e-14,250;CL:0000192,7.76e-14,43;CL:0000514,7.76e-14,43;CL:0000359,1.32e-12,32;CL:0002620,6.87e-11,23;CL:0002334,3.15e-07,12;CL:0000499,7.01e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;5.29e-10;43!CL:0000355;2.36e-09;58 | |ontology_enrichment_development_v019=CL:0000514;5.29e-10;43!CL:0000355;2.36e-09;58 | ||
|ontology_enrichment_disease=DOID:2394!2.89e-08!14 | |ontology_enrichment_disease=DOID:2394!2.89e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.86e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;2.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.89e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.62e-20!83;UBERON:0002329!1.62e-20!83;UBERON:0003077!1.62e-20!83;UBERON:0003059!1.62e-20!83;UBERON:0007282!1.62e-20!83;UBERON:0009618!1.62e-20!83;UBERON:0007285!1.62e-20!83;UBERON:0004290!1.44e-17!70;UBERON:0000486!1.94e-17!82;UBERON:0005256!3.57e-16!143;UBERON:0001134!5.00e-16!61;UBERON:0002036!5.00e-16!61;UBERON:0003082!5.00e-16!61;UBERON:0002385!1.78e-15!63;UBERON:0001015!1.78e-15!63;UBERON:0000383!1.78e-15!63;UBERON:0004872!9.85e-15!84;UBERON:0002100!2.22e-14!216;UBERON:0000490!2.19e-13!138;UBERON:0002049!3.50e-12!79;UBERON:0007798!3.50e-12!79;UBERON:0001637!5.01e-12!42;UBERON:0003509!5.01e-12!42;UBERON:0004572!5.01e-12!42;UBERON:0003102!5.79e-11!95;UBERON:0001981!7.25e-11!60;UBERON:0007500!7.25e-11!60;UBERON:0004537!7.25e-11!60;UBERON:0006965!7.25e-11!60;UBERON:0000055!1.32e-10!69;UBERON:0002199!1.39e-10!45;UBERON:0002416!1.39e-10!45;UBERON:0003104!1.50e-10!238;UBERON:0009142!1.50e-10!238;UBERON:0004573!1.88e-10!33;UBERON:0004571!1.88e-10!33;UBERON:0003914!7.36e-10!118;UBERON:0002097!1.52e-09!40;UBERON:0000475!3.79e-09!365;UBERON:0001009!9.48e-09!113;UBERON:0000468!1.06e-08!659;UBERON:0004535!1.68e-08!110;UBERON:0004923!3.00e-08!57;UBERON:0000926!1.10e-07!448;UBERON:0004120!1.10e-07!448;UBERON:0006603!1.10e-07!448;UBERON:0007100!8.43e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!1.62e-20!83;UBERON:0002329!1.62e-20!83;UBERON:0003077!1.62e-20!83;UBERON:0003059!1.62e-20!83;UBERON:0007282!1.62e-20!83;UBERON:0009618!1.62e-20!83;UBERON:0007285!1.62e-20!83;UBERON:0004290!1.44e-17!70;UBERON:0000486!1.94e-17!82;UBERON:0005256!3.57e-16!143;UBERON:0001134!5.00e-16!61;UBERON:0002036!5.00e-16!61;UBERON:0003082!5.00e-16!61;UBERON:0002385!1.78e-15!63;UBERON:0001015!1.78e-15!63;UBERON:0000383!1.78e-15!63;UBERON:0004872!9.85e-15!84;UBERON:0002100!2.22e-14!216;UBERON:0000490!2.19e-13!138;UBERON:0002049!3.50e-12!79;UBERON:0007798!3.50e-12!79;UBERON:0001637!5.01e-12!42;UBERON:0003509!5.01e-12!42;UBERON:0004572!5.01e-12!42;UBERON:0003102!5.79e-11!95;UBERON:0001981!7.25e-11!60;UBERON:0007500!7.25e-11!60;UBERON:0004537!7.25e-11!60;UBERON:0006965!7.25e-11!60;UBERON:0000055!1.32e-10!69;UBERON:0002199!1.39e-10!45;UBERON:0002416!1.39e-10!45;UBERON:0003104!1.50e-10!238;UBERON:0009142!1.50e-10!238;UBERON:0004573!1.88e-10!33;UBERON:0004571!1.88e-10!33;UBERON:0003914!7.36e-10!118;UBERON:0002097!1.52e-09!40;UBERON:0000475!3.79e-09!365;UBERON:0001009!9.48e-09!113;UBERON:0000468!1.06e-08!659;UBERON:0004535!1.68e-08!110;UBERON:0004923!3.00e-08!57;UBERON:0000926!1.10e-07!448;UBERON:0004120!1.10e-07!448;UBERON:0006603!1.10e-07!448;UBERON:0007100!8.43e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.32e-09;33!UBERON:0004571;1.32e-09;33!UBERON:0001637;6.16e-09;42!UBERON:0003509;6.16e-09;42!UBERON:0004572;6.16e-09;42!UBERON:0002384;9.29e-08;198!UBERON:0002097;1.15e-07;41!UBERON:0002199;4.33e-07;46!UBERON:0002416;4.33e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.32e-09;33!UBERON:0004571;1.32e-09;33!UBERON:0001637;6.16e-09;42!UBERON:0003509;6.16e-09;42!UBERON:0004572;6.16e-09;42!UBERON:0002384;9.29e-08;198!UBERON:0002097;1.15e-07;41!UBERON:0002199;4.33e-07;46!UBERON:0002416;4.33e-07;46 | ||
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| ||
|short_description=p1@CALU | |short_description=p1@CALU | ||
}} | }} |
Revision as of 00:23, 20 November 2012
Short description: | p1@CALU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CALU_5end |
Coexpression cluster: | C811_Smooth_Fibroblast_Preadipocyte_Chondrocyte_hepatic_basal_Adipocyte |
Association with transcript: | 0bp_to_ENST00000249364, ENST00000342367, ENST00000449187_5end |
EntrezGene: | CALU |
HGNC: | 1458 |
UniProt: | O43852 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.48e-22 | 76 |
muscle precursor cell | 1.43e-17 | 58 |
myoblast | 1.43e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-17 | 58 |
muscle cell | 2.11e-16 | 55 |
mesodermal cell | 6.30e-16 | 121 |
electrically responsive cell | 7.22e-14 | 61 |
electrically active cell | 7.22e-14 | 61 |
embryonic cell | 7.22e-14 | 250 |
smooth muscle cell | 7.76e-14 | 43 |
smooth muscle myoblast | 7.76e-14 | 43 |
vascular associated smooth muscle cell | 1.32e-12 | 32 |
skin fibroblast | 6.87e-11 | 23 |
preadipocyte | 3.15e-07 | 12 |
stromal cell | 7.01e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.89e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.