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MacroAPE 1083:EOMES f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;3.484218854431249;68.59548921182741;2.2683419162418605;2.403542824407404!2;3.4024372799311644;1.5084188298734926;67.59507470311007;4.2456619...")
 
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44!10464-106H5;0.329007!10827-111C8;0.0869819!10789-110H6;0.503399!10828-111C9;0.243046!10788-110H5;0.332895!10792-110H9;0.283017!10765-110E9;0.260114!10829-111D1;0.0965337!10830-111D2;0.271338!10831-111D3;0.325532!10832-111D4;0.295082!10833-111D5;0.180548!10764-110E8;0.249479!10770-110F5;0.0922842!10399-106A3;0.0276333!10400-106A4;0.197561!10405-106A9;0.189546!10834-111D6;0.123783!10835-111D7;0.0164683!10836-111D8;0.440683!10837-111D9;0.203251!10699-109G6;0.583199!10802-111A1;0.184725!10796-110I4;0.44649!10010-101C1;0.00160755!10810-111A9;0.422074!10421-106C7;0.592413!10708-109H6;0.0771676!12235-129G3;0.790268!12236-129G4;0.70811!12237-129G5;0.241183!10167-103B5;0.80018!10151-102I7;0.00322979!10428-106D5;0.000726418!10795-110I3;0.259422!10805-111A4;0.0758658!10052-101G7;0.490282!10189-103D9;0.164689!10589-108D4;0.708985!10425-106D2;0.901264!10427-106D4;0.992685!10702-109G9;0.132631!10432-106D9;0.223835!10496-107C1;0.0277975!10718-109I7;0.0438891!10011-101C2;0.105071!10053-101G8;0.0353013!10686-109F2;0.703409!10084-102B3;0.847221!10012-101C3;0.0505425!10085-102B4;0.0010375!10482-107A5;0.181165!10419-106C5;0.104027!10080-102A8;0.176652!10760-110E4;0.409089!10709-109H7;0.431519!10710-109H8;0.0463929!10703-109H1;0.0100699!10719-109I8;0.879729!10642-109A3;0.844765!10177-103C6;0.618294!10164-103B2;0.000814905!10173-103C2;0.00136067!10166-103B4;0.0695909!10083-102B2;0.0195744!10188-103D8;0.109077!10552-107I3;0.0413803!10553-107I4;0.0179242!10013-101C4;0.0902101!10536-107G5;0.182973!10618-108G6;0.167608!10423-106C9;0.202945!10785-110H2;0.314603!12238-129G6;0.0088842!12239-129G7;0.247392!12240-129G8;0.55198!10416-106C2;0.883016!10801-110I9;0.251539!10766-110F1;0.12803!10824-111C5;0.0946555!10825-111C6;0.690288!10826-111C7;0.591502!10454-106G4;0.727644!10409-106B4;0.57405!10638-108I8;0.294659!10636-108I6;0.190557!10513-107D9;0.021759!10420-106C6;0.122722!10082-102B1;0.687774!10014-101C5;0.87681!10070-101I7;0.528914!10452-106G2;0.153164!10453-106G3;0.8047!10449-106F8;0.75306!10042-101F6;0.680397!10069-101I6;0.0236045!10193-103E4;0.127066!10631-108I1;0.00418672!10438-106E6;0.199348!10488-107B2;0.0538006!10196-103E7;0.325145!10071-101I8;0.00436421!10071-101I8;0.416192!10041-101F5;0.0365784!10451-106G1;0.228025!10450-106F9;0.0116457!10604-108F1;0.252938!10605-108F2;0.0185249!10606-108F3;0.0241659!10603-108E9;0.027111!10497-107C2;0.050868!10448-106F7;0.0220762!10643-109A4;0.322171!10426-106D3;0.0560449!10431-106D8;0.022169!10197-103E8;0.0773025!10443-106F2;0.0107855!10815-111B5;0.130205!10816-111B6;0.0830543!10817-111B7;0.0219208!10015-101C6;0.0771087!10410-106B5;0.160755!10054-101G9;0.366841!10758-110E2;0.00978914!10711-109H9;0.132359!10040-101F4;0.457714!10470-106I2;0.00345266!10415-106C1;0.0109173!10198-103E9;0.260202!10614-108G2;0.289146!10612-108F9;0.0304236!10549-107H9;0.0108778!10615-108G3;0.475002!10487-107B1;0.586236!10433-106E1;0.409593!10688-109F4;0.0669607!10444-106F3;0.0199859!10444-106F3;0.698817!10485-107A8;0.495992!10413-106B8;0.177166!10175-103C4;0.554189!10161-103A8;0.00833503!12131-128D7;0.0042768!10624-108H3;0.0249082!10712-109I1;0.952677!10205-103F7;0.638689!10206-103F8;0.152798!10207-103F9;0.0637075!10050-101G5;0.936617!10051-101G6;0.618739!10016-101C7;0.104572!10046-101G1;0.0573917!10778-110G4;0.101965!10633-108I3;0.0920077!10818-111B8;0.321842!10819-111B9;0.879548!10820-111C1;0.918382!10484-107A7;0.774158!10808-111A7;0.0958972!10169-103B7;0.105925!10153-102I9;0.000657351!13425-144D5;0.00173338!13433-144E4;0.230197!13437-144E8;0.365772!11904-125F5;0.357065!11905-125F6;0.11999!10039-101F3;0.0549575!10791-110H8;0.00723786!10017-101C8;0.452116!10045-101F9;0.00147458!10509-107D5;0.293269!10839-111E2;0.148824!10692-109F8;0.00327914!10079-102A7;0.0248112!10078-102A6;0.092773!10721-110A1;0.0564541!10569-108B2;0.0833797!10570-108B3;0.0888081!10571-108B4;0.0133132!10647-109A8;0.0476662!10752-110D5;0.801039!10782-110G8;0.14018!10726-110A6;0.00285585!10018-101C9;0.17032!10086-102B5;0.0396583!10182-103D2;0.508714!10165-103B3;0.00158601!10499-107C4;0.000462518!10408-106B3;0.0057149!10019-101D1;0.429136!10068-101I5;0.639217!10075-102A3;0.0885403!10077-102A5;0.707931!10727-110A7;0.788309!10775-110G1;0.00235989!10412-106B7;0.374357!12231-129F8;0.226233!12232-129F9;0.801523!12233-129G1;0.733027!12234-129G2;0.727567!10414-106B9;0.251068!10170-103B8;0.608797!10183-103D3;0.00244074!10150-102I6;0.00365328!10174-103C3;0.0014452!10155-103A2;0.00240409!10038-101F2;0.00154881!10838-111E1;0.0064883!10759-110E3;0.237523!10514-107E1;0.8889!10465-106H6;0.871303!10691-109F7;0.668874!10843-111E6;0.262943!10844-111E7;0.684568!11747-123G1;0.214662!11748-123G2;0.760427!11749-123G3;0.706277!11750-123G4;0.954848!11751-123G5;0.653168!11840-124H4;0.504398!11752-123G6;0.836187!11753-123G7;0.786532!11754-123G8;0.834849!11755-123G9;0.913365!11756-123H1;0.325619!11833-124G6;0.266425!11760-123H5;0.622985!11836-124G9;0.0638675!11758-123H3;0.864524!11835-124G8;0.0398606!11762-123H7;0.191638!11838-124H2;0.791794!11757-123H2;0.0727384!11759-123H4;0.0437321!11761-123H6;0.221551!11842-124H6;0.67057!11837-124H1;0.405522!10568-108B1;0.0887272!13230-141I8;0.258968!13231-141I9;0.387072!10696-109G3;0.667058!10493-107B7;0.160308!10494-107B8;0.0418481!10850-111F4;0.0631145!10851-111F5;0.531234!10852-111F6;0.645841!10853-111F7;0.0823393!10854-111F8;0.13871!10855-111F9;0.737547!10856-111G1;0.172948!10847-111F1;0.264971!10846-111E9;0.12097!10848-111F2;0.210321!10845-111E8;0.049963!10857-111G2;0.5739!10858-111G3;0.161244!10156-103A3;0.0907325!11901-125F2;0.00140669!11902-125F3;0.714623!11903-125F4;0.19781!10689-109F5;0.279447!10648-109A9;0.383232!10784-110H1;0.555237!10744-110C6;0.516309!10772-110F7;0.507795!10474-106I6;0.0154855!10600-108E6;0.1169!10684-109E9;0.329865!12226-129F3;0.00756731!12227-129F4;0.401492!10508-107D4;0.789353!10539-107G8;0.265958!10607-108F4;0.430667!10555-107I6;0.635447!10774-110F9;0.551598!10637-108I7;0.202329!10663-109C6;0.23526!10728-110A8;0.716565!10729-110A9;0.569511!10430-106D7;0.656476!10730-110B1;0.2344!10813-111B3;0.653159!10812-111B2;0.92157!10037-101F1;0.366532!10172-103C1;0.00578314!10163-103B1;0.00163389!10076-102A4;0.00402641!10073-102A1;0.0360478!10036-101E9;0.084285!10195-103E6;0.0267006!10277-104E7;0.00465475!10434-106E2;0.0149832!10550-107I1;0.125341!10545-107H5;0.31169!10544-107H4;0.540755!10704-109H2;0.0402627!10510-107D6;0.219452!10558-107I9;0.22673!10020-101D2;0.971385!10732-110B3;0.572141!10049-101G4;0.586999!10698-109G5;0.143845!10437-106E5;0.353967!10417-106C3;0.718134!10035-101E8;0.0250159!10171-103B9;0.00596609!10157-103A4;0.00235778!10034-101E7;0.00339448!10072-101I9;0.0099381!10199-103F1;0.119346!10200-103F2;0.354415!10697-109G4;0.00912939!10723-110A3;0.557649!10179-103C8;0.0995365!10160-103A7;0.00719509!10180-103C9;0.0114733!10162-103A9;0.00522758!10021-101D3;0.0189919!10840-111E3;0.166041!10706-109H4;0.0132503!10033-101E6;0.967528!10032-101E5;0.00248037!10490-107B4;0.014845!10439-106E7;0.0118743!10022-101D4;0.0198503!10176-103C5;0.132774!10469-106I1;0.00191754!10067-101I4;0.013798!10411-106B6;0.447221!10471-106I3;0.719014!10030-101E3;0.527917!10475-106I7;0.0262463!10787-110H4;0.542635!10477-106I9;0.989408!10695-109G2;0.183024!11771-123I7;0.854109!11772-123I8;0.498396!11773-123I9;0.218804!10093-102C3;0.443406!10442-106F1;0.66049!10442-106F1;0.667434!10201-103F3;0.77683!10639-108I9;0.254972!11843-124H7;0.0402123!11841-124H5;0.120624!10693-109F9;0.153855!10436-106E4;0.553569!10483-107A6;0.0416861!10282-104F3;0.0475204!10023-101D5;0.0265059!10066-101I3;0.033267!10065-101I2;0.161402!10800-110I8;0.118995!10610-108F7;0.782346!10841-111E4;0.804245!10541-107H1;0.529659!10842-111E5;0.936788!10562-108A4;0.79767!10024-101D6;0.549549!10064-101I1;0.836072!10609-108F6;0.428918!10048-101G3;0.165323!10781-110G7;0.0222367!10181-103D1;0.385049!10159-103A6;0.00152704!10056-101H2;0.00716215!10737-110B8;0.0225437!10025-101D7;0.671773!10044-101F8;0.788417!10424-106D1;0.970788!10463-106H4;0.097191!10616-108G4;0.0682507!10486-107A9;0.770497!10062-101H8;0.628179!10202-103F4;0.34098!10158-103A5;0.082378!10441-106E9;0.00333724!10031-101E4;0.515707!10063-101H9;0.017441!10063-101H9;0.0840734!11763-123H8;0.198507!11765-123I1;0.683218!11768-123I4;0.497618!10807-111A6;0.557965!10790-110H7;0.630656!10798-110I6;0.712748!10786-110H3;0.834484!10591-108D6;0.894454!10593-108D8;0.712174!10590-108D5;0.874871!10026-101D8;0.757558!10096-102C6;0.096927!10168-103B6;0.322729!10154-103A1;0.00449368!10209-103G2;0.00125739!10061-101H7;0.203158!10027-101D9;0.0160773!10043-101F7;0.453364!10783-110G9;0.677715!10028-101E1;0.872856!10060-101H6;0.0336981!10203-103F5;0.187988!10059-101H5;0.159126!10047-101G2;0.0574758!10029-101E2;0.800329!10058-101H4;0.303106!10418-106C4;0.0263256!10492-107B6;0.117889!10694-109G1;0.00956809!10797-110I5;0.908862!10057-101H3;0.645521!10100-102D1;0.0637802!10055-101H1;0.388857!10204-103F6;0.0606134!10191-103E2;0.311846!10563-108A5;0.514151
|name=EOMES_f1
|name=EOMES_f1
|tomtom_result=OAF1#MA0348.1;1;0.00076071;0.362098;0.422698;8;CGGGGATACGAAAT;TCGGAGATA;+!YAP3#MA0416.1;-6;0.00217305;1.03437;0.422698;8;CGGGGATACGAAAT;TACGTAAT;-!UPC2#MA0411.1;-4;0.00229818;1.09393;0.422698;7;CGGGGATACGAAAT;TATACGA;+!STB5#MA0392.1;0;0.00246799;1.17476;0.422698;8;CGGGGATACGAAAT;CGGTGTTA;+!MZF1_1-4#MA0056.1;0;0.00249782;1.18896;0.422698;6;CGGGGATACGAAAT;TGGGGA;+!HAP1#MA0312.1;0;0.00268251;1.27687;0.422698;8;CGGGGATACGAAAT;CGGAGATA;+!HLF#MA0043.1;-3;0.00405777;1.9315;0.509666;11;CGGGGATACGAAAT;GGTTACGCAATT;+!YRR1#MA0439.1;1;0.00431256;2.05278;0.509666;10;CGGGGATACGAAAT;GCGGAGATAAG;-!PEND#MA0127.1;-4;0.00507168;2.41412;0.532782;10;CGGGGATACGAAAT;AATAAGAAGT;-!GSM1#MA0308.1;7;0.00629369;2.9958;0.577291;14;CGGGGATACGAAAT;TATACTCCGGAGTTTTTTAAT;-!YDR520C#MA0422.1;1;0.00793267;3.77595;0.577291;9;CGGGGATACGAAAT;CCGGAGATAA;+!STAT1#MA0137.1;-2;0.00799272;3.80453;0.577291;12;CGGGGATACGAAAT;GGAAAACGAAACTG;+!Su(H)#MA0085.1;2;0.00854947;4.06955;0.577291;14;CGGGGATACGAAAT;CTGTGGGAAACGAGAT;+!YPR196W#MA0437.1;0;0.00859858;4.09292;0.577291;9;CGGGGATACGAAAT;CGGAGAAAT;-!gt#MA0447.1;-4;0.0098548;4.69088;0.577291;10;CGGGGATACGAAAT;ATTACGTAAT;+!NHP10#MA0344.1;2;0.0103801;4.94095;0.577291;6;CGGGGATACGAAAT;GCCGGGGA;+!usp#MA0016.1;-1;0.0133476;6.35345;0.701086;10;CGGGGATACGAAAT;GGGGTCACGG;+!SNT2#MA0384.1;0;0.014212;6.76492;0.707201;11;CGGGGATACGAAAT;CGGCGCTACCA;-!PDR8#MA0354.1;1;0.0156353;7.44241;0.739124;7;CGGGGATACGAAAT;GCGGAGAT;+!Gata1#MA0035.2;-1;0.0182397;8.68208;0.815725;11;CGGGGATACGAAAT;ACAGATAAGAA;+!GATA2#MA0036.1;-3;0.0205066;9.76114;0.815725;5;CGGGGATACGAAAT;GGATA;+!YAP1#MA0415.1;1;0.020621;9.81558;0.815725;14;CGGGGATACGAAAT;ACGAGCTTACGTAAGCAAAT;-
}}
}}

Latest revision as of 14:55, 7 September 2012

Full Name: EOMES_f1

Motif matrix
POACGT
13.48421885443124968.595489211827412.26834191624186052.403542824407404
23.40243727993116441.508418829873492667.595074703110074.245661993993136
32.31463752261584870.607938469094693670.971438688878792.857578126318588
43.97504096976301472.10843318224003165.743551425298024.924567229606811
53.47629473770309351.812388064420839967.357019652841324.10589035194265
670.31011238207672.1163572989681873.17232550315574621.1527976227072707
70.96355967626091631.8238154072840832.582478549348117771.3817391740148
870.067702409817952.01952788044847553.0928643712858731.5714981453556107
90.963559676260916373.608596516196680.02.1794366144503052
100.96355967626091630.607938469094693672.140402316078783.039692345473464
1173.964217723362920.96355967626091631.21587693818938880.6079384690946936
1275.044893753386750.01.70669905352115440.0
1374.73206492645940.60793846909469361.41158941135378120.0
140.00.96355967626091631.706699053521154474.08133407712579

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
OAF1#MA0348.110.000760710.3620980.4226988CGGGGATACGAAATTCGGAGATA+
YAP3#MA0416.1-60.002173051.034370.4226988CGGGGATACGAAATTACGTAAT-
UPC2#MA0411.1-40.002298181.093930.4226987CGGGGATACGAAATTATACGA+
STB5#MA0392.100.002467991.174760.4226988CGGGGATACGAAATCGGTGTTA+
MZF1_1-4#MA0056.100.002497821.188960.4226986CGGGGATACGAAATTGGGGA+
HAP1#MA0312.100.002682511.276870.4226988CGGGGATACGAAATCGGAGATA+
HLF#MA0043.1-30.004057771.93150.50966611CGGGGATACGAAATGGTTACGCAATT+
YRR1#MA0439.110.004312562.052780.50966610CGGGGATACGAAATGCGGAGATAAG-
PEND#MA0127.1-40.005071682.414120.53278210CGGGGATACGAAATAATAAGAAGT-
GSM1#MA0308.170.006293692.99580.57729114CGGGGATACGAAATTATACTCCGGAGTTTTTTAAT-
YDR520C#MA0422.110.007932673.775950.5772919CGGGGATACGAAATCCGGAGATAA+
STAT1#MA0137.1-20.007992723.804530.57729112CGGGGATACGAAATGGAAAACGAAACTG+
Su(H)#MA0085.120.008549474.069550.57729114CGGGGATACGAAATCTGTGGGAAACGAGAT+
YPR196W#MA0437.100.008598584.092920.5772919CGGGGATACGAAATCGGAGAAAT-
gt#MA0447.1-40.00985484.690880.57729110CGGGGATACGAAATATTACGTAAT+
NHP10#MA0344.120.01038014.940950.5772916CGGGGATACGAAATGCCGGGGA+
usp#MA0016.1-10.01334766.353450.70108610CGGGGATACGAAATGGGGTCACGG+
SNT2#MA0384.100.0142126.764920.70720111CGGGGATACGAAATCGGCGCTACCA-
PDR8#MA0354.110.01563537.442410.7391247CGGGGATACGAAATGCGGAGAT+
Gata1#MA0035.2-10.01823978.682080.81572511CGGGGATACGAAATACAGATAAGAA+
GATA2#MA0036.1-30.02050669.761140.8157255CGGGGATACGAAATGGATA+
YAP1#MA0415.110.0206219.815580.81572514CGGGGATACGAAATACGAGCTTACGTAAGCAAAT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:EOMES_f1&oldid=2134535"