FFCP PHASE1:Mm9::chr11:96132456..96132467,+: Difference between revisions
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|id=chr11:96132456..96132467,+ | |id=chr11:96132456..96132467,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.67e-34,3;CL:0002611,1.09e-22,2;CL:0000117,2.71e-12,23;CL:0000337,2.71e-12,23;CL:0000540,1.26e-08,33;CL:0000047,1.26e-08,33;CL:0000031,1.26e-08,33;CL:0000404,1.26e-08,33;CL:0000393,2.54e-07,39;CL:0000211,2.54e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.33e-29!21;UBERON:0002113!2.88e-21!14;UBERON:0003918!2.88e-21!14;UBERON:0005095!2.88e-21!14;UBERON:0007687!2.88e-21!14;UBERON:0006554!4.35e-18!16;UBERON:0001008!8.80e-17!17;UBERON:0002240!2.29e-11!6;UBERON:0005174!2.29e-11!6;UBERON:0001137!2.29e-11!6;UBERON:0003103!2.69e-11!43;UBERON:0001948!8.61e-10!5;UBERON:0002315!8.61e-10!5;UBERON:0000080!7.33e-07!4;UBERON:0005904!7.33e-07!4;UBERON:0006947!7.33e-07!4;UBERON:0002120!7.33e-07!4;UBERON:0004054!7.33e-07!4;UBERON:0004875!7.33e-07!4;UBERON:0004876!7.33e-07!4;UBERON:0005721!7.33e-07!4;UBERON:0005754!7.33e-07!4;UBERON:0007297!7.33e-07!4 | |ontology_enrichment_uberon=UBERON:0000489!1.33e-29!21;UBERON:0002113!2.88e-21!14;UBERON:0003918!2.88e-21!14;UBERON:0005095!2.88e-21!14;UBERON:0007687!2.88e-21!14;UBERON:0006554!4.35e-18!16;UBERON:0001008!8.80e-17!17;UBERON:0002240!2.29e-11!6;UBERON:0005174!2.29e-11!6;UBERON:0001137!2.29e-11!6;UBERON:0003103!2.69e-11!43;UBERON:0001948!8.61e-10!5;UBERON:0002315!8.61e-10!5;UBERON:0000080!7.33e-07!4;UBERON:0005904!7.33e-07!4;UBERON:0006947!7.33e-07!4;UBERON:0002120!7.33e-07!4;UBERON:0004054!7.33e-07!4;UBERON:0004875!7.33e-07!4;UBERON:0004876!7.33e-07!4;UBERON:0005721!7.33e-07!4;UBERON:0005754!7.33e-07!4;UBERON:0007297!7.33e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.35e-65,6;UBERON:0005174,1.35e-65,6;UBERON:0001137,1.35e-65,6;UBERON:0001948,3.21e-55,5;UBERON:0002315,3.21e-55,5;UBERON:0002257,3.67e-34,3;UBERON:0003076,5.39e-33,12;UBERON:0003057,5.39e-33,12;UBERON:0000489,1.33e-25,21;UBERON:0002256,1.09e-22,2;UBERON:0003103,1.52e-12,43;UBERON:0002020,2.23e-08,34;UBERON:0001049,1.06e-07,52;UBERON:0005068,1.06e-07,52;UBERON:0006241,1.06e-07,52;UBERON:0007135,1.06e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.42955395046775,0,0,0,0,0,0,0,0,0,0,0,0,4.41942878210502,3.41692033917847,7.82877672466262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0.456994050438915,2.25415471346161,0.814605311381257,0.969762435838129,0.49095073923223,0.379419222745544,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.830298780673413,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.661774257358546,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.42955395046775,0,0,0,0,0,0,0,0,0,0,0,0,4.41942878210502,3.41692033917847,7.82877672466262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0.456994050438915,2.25415471346161,0.814605311381257,0.969762435838129,0.49095073923223,0.379419222745544,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.830298780673413,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.661774257358546,0 | ||
|short_description=p4@Hoxb9 | |short_description=p4@Hoxb9 | ||
}} | }} |
Revision as of 11:56, 14 November 2012
Short description: | p4@Hoxb9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hoxb9_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -176bp_to_NM_008270, uc007lbn.1_5end |
EntrezGene: | Hoxb9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.67e-34 | 3 |
neuron of the dorsal spinal cord | 1.09e-22 | 2 |
CNS neuron (sensu Vertebrata) | 2.71e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-12 | 23 |
neuron | 1.26e-08 | 33 |
neuronal stem cell | 1.26e-08 | 33 |
neuroblast | 1.26e-08 | 33 |
electrically signaling cell | 1.26e-08 | 33 |
electrically responsive cell | 2.54e-07 | 39 |
electrically active cell | 2.54e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.35e-65 | 6 |
dorsal region element | 1.35e-65 | 6 |
dorsum | 1.35e-65 | 6 |
regional part of spinal cord | 3.21e-55 | 5 |
gray matter of spinal cord | 3.21e-55 | 5 |
ventral horn of spinal cord | 3.67e-34 | 3 |
posterior neural tube | 5.39e-33 | 12 |
chordal neural plate | 5.39e-33 | 12 |
cavitated compound organ | 1.33e-25 | 21 |
dorsal horn of spinal cord | 1.09e-22 | 2 |
compound organ | 1.52e-12 | 43 |
gray matter | 2.23e-08 | 34 |
neural tube | 1.06e-07 | 52 |
neural rod | 1.06e-07 | 52 |
future spinal cord | 1.06e-07 | 52 |
neural keel | 1.06e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.