Personal tools

FFCP PHASE1:Mm9::chr2:76486028..76486048,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr2:76486028..76486048,-
|id=chr2:76486028..76486048,-
|ontology_enrichment_celltype=CL:0000540!6.41e-14!33;CL:0000047!6.41e-14!33;CL:0000031!6.41e-14!33;CL:0000404!6.41e-14!33;CL:0000393!1.69e-12!39;CL:0000211!1.69e-12!39;CL:0000221!7.24e-10!44;CL:0000133!7.24e-10!44;CL:0000117!1.59e-09!23;CL:0000337!1.59e-09!23;CL:0002319!2.26e-09!43;CL:0000055!4.41e-08!50;CL:0002321!7.42e-07!70;CL:0000220!7.42e-07!70
|ontology_enrichment_celltype=CL:0000540!6.41e-14!33;CL:0000047!6.41e-14!33;CL:0000031!6.41e-14!33;CL:0000404!6.41e-14!33;CL:0000393!1.69e-12!39;CL:0000211!1.69e-12!39;CL:0000221!7.24e-10!44;CL:0000133!7.24e-10!44;CL:0000117!1.59e-09!23;CL:0000337!1.59e-09!23;CL:0002319!2.26e-09!43;CL:0000055!4.41e-08!50;CL:0002321!7.42e-07!70;CL:0000220!7.42e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000540,6.33e-14,33;CL:0000047,6.33e-14,33;CL:0000031,6.33e-14,33;CL:0000404,6.33e-14,33;CL:0000393,1.67e-12,39;CL:0000211,1.67e-12,39;CL:0000221,7.18e-10,44;CL:0000133,7.18e-10,44;CL:0000117,1.58e-09,23;CL:0000337,1.58e-09,23;CL:0002319,2.24e-09,43;CL:0002321,6.94e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=14.8938427807458,4.88565570695105,7.27998783023258,4.23449895829562,4.50806156951712,2.51818907867835,4.43864017131499,0.129123323441576,1.267098499365,1.40438715793196,0,0.239316476986009,0.342401459862411,0.34968160967599,0.666219523631325,0.404950534779652,0,0.630924330716475,0.548457734422955,0.42438965179803,3.656861476496,1.78723712161594,1.04479915655574,2.3998863419011,2.75291137280604,6.89078356938024,3.87685796543167,3.44753972297422,3.23039813075836,3.2763916868791,2.66076612786366,3.17515336729816,3.69038872550742,0,4.62162591602039,5.98444723290572,6.53341940039581,1.67412652294763,1.5626706890476,2.61761871986899,0.588231488031014,0.683045484958446,4.36959317728038,3.9028013572429,4.1564541800001,5.50640256485045,3.9119567217402,2.39827672018491,2.63623419281366,4.27745777963423,2.93971485413261,5.75010257459886,0.167782606057736,0.725362142011344,0.336093799142464,4.11615097657515,3.15186783932632,5.15672092277442,17.8038485556446,16.9277113367051,15.2119536841483,1.69422266034566,4.4464739805557,0.449949858640699,0,0.7104801149461,2.69640099466564,1.15265491596466,16.7977171939734,14.3106294631592,13.2504725651371,12.2829923293636,10.3808214247258,16.6587486932338,14.8560480078266,16.5459381589804,6.60695285996332,3.19218345212969,3.5329502648936,16.353899678544,18.1145534332771,17.1901412283731,4.18774498502071,5.6276261003168,5.04234217663473,10.9012576625257,12.6710795911202,16.7759501242771,1.81742863999642,4.1564358058732,6.37701875143691,0.860423876981386,0,1.61910957491345,1.29955283489534,1.34408066129201,2.52799956237153,3.74946709671727,4.93593408745451,7.77347063922748,14.3660288172214,10.2661181931454,22.9324715735981,7.11066703153331,2.59789249213457,1.77351905832569,1.51657333504435,1.94112595522402,4.14300613835475,2.82040064223167,7.11289839741157,6.39377504455497,5.5347719341454,6.0289056221049,4.8211369925639,3.01599819191221,1.48316980640624,1.73519228303894,3.5384422077995,4.52947179852746,2.65009822152472,3.87900202508178,1.86391761218122,3.51336956413857,3.56059401582874,2.29911349687732,2.87556298814209,5.99902730993408,3.81210681219194,4.34392854273986,3.20250421973039,11.6858547464964,1.91206752211504,2.55715457330331,2.49345653471472,3.24482526135515,5.19380755636613,4.97627882440372,7.83440551144392,1.68353484709179,14.053007839972,12.644615743841,9.72335500948886,13.7141384230501,11.0899493616664,12.4270308676304,13.3056448874815,3.3631438196072,14.6586235194333,15.3175924935934,16.1875034230833,8.98702502953057,10.5657954705727,3.48252166522167,6.79081050146213,11.7430217422911,4.91549231119264,5.1469581422943,3.9782889915383,6.42089894860056,4.92504725960302,6.12211008967451,7.57583153872673,6.09969118416952,6.78775296704464,4.65067889500816,5.36546802799238,3.73649095574942,3.45575684818309,3.77585167381919,3.16168357228837,2.92399974850665,2.85415149878366,2.81833479396781,3.36463917702604,10.9078889122042,1.65209391491899,0.793351699990633,9.81125952462076,8.36052018697579,5.67016829817211,5.44545516483025,5.55945109612176,3.42406127002606,4.2707615539006,3.29397909448022,3.2673577144035,2.58643413653496,4.09424582950152,3.59527763461689,2.80979464837102,2.58883655230677,12.8974172648096,9.82537208443668,11.270773567308,12.2190796707189,9.89157684554891,9.11765658574141,6.5133633237985,3.98547399544926,3.61097074035162,3.57851775373222,1.77871576252289,1.66845105716094,2.35870794135844,2.02375901146368,1.62288097110802,2.17059443777175,1.78238096246994,2.30156909960649,1.62135226775035,1.92192989231657,4.31304619582064,3.72140947668503,2.49630138491648,1.26289438973556,1.07638448113147,2.8946611281802,2.58654466233247,14.9698215298683,10.9186534216157,9.50572480341054,10.0916806764056,6.53274404023081,5.2369600994923,5.07347484430277,7.72412206120336,6.2010113101657,5.26200736569707,3.76885623846197,4.14443956478149,2.74833211304872,0,2.17562273527484,2.45882136509518,1.10374698521893,4.0137647496948,4.33683240391152,9.18035694109382,1.76729649043061,11.6738041184015,7.41833614163613,17.2338718186239,10.2756583119597,10.6943363559549,9.34152551603147,11.334699646897,9.9366991689846,12.6492088942888,2.89189184779626,5.53566332312248,8.01295216502649,6.8412522928502,4.78413356620353,0,8.25454162926937,7.25576536715402,2.64047111658257,3.54362271456927,4.30409207121498,1.80899805217755,3.99887102425256,3.92147116223193,2.21225730555071,0,0,1.70219802876894,12.2441543941291,8.40831444587904,8.3591443662321,7.80297028026004,9.0968096977056,8.88564711251453,3.04464949114599,0.938686832254841,0.847328283455281,1.98475558249466,1.81374878235628,2.58343082713449,2.89502039655148,1.67121281604391,1.47726809770555,2.62332752966866,2.96680483216816,1.87957968877638,8.87463532241857,5.74103034846106,1.88368457004691,1.0935538217682,2.0590035588587,3.22959016988325,3.07893195112048,2.9021994498929,2.86401185404534,10.597255784968,8.94605655358134,7.12835249423888,3.97267762427491,4.58561383866973,4.31565908431426,4.21532624199213,1.57053565190418,2.98114438571124,3.10669656543463,9.01908701894705,10.6156747691225,10.9202603701684,8.94475466382619,10.074466231263,10.644235905919,11.0315804327009,20.0514752659683,21.391306262845,13.7702948870823,12.0972602628303,2.52808896502543,6.28448167399509,4.82741498674688,3.11809975146708,3.04345382634718,2.38417625737518,1.80293174279953,1.62458479892035,1.21159739937777,1.905170166375,2.01652370273681,1.75424185331554,1.44317762460494,2.22066114144981,2.49403421976732,1.33191572024439,0.717710852875806,1.00730769818447,3.47741269257943,3.56596703357246,4.02933573387983,1.50057865355346,2.00628841614145,2.25900737046827,1.84130094602871,1.71868654031819,2.23409137046794,2.05524755931193,1.5107877947794,2.02506750069542,3.15224842256954,2.71885445390523,1.55328093525546,15.4643147900423,15.1629451892392,10.5854835567563,9.48116196566347,8.38452650511929,5.33146174505041,7.11189528965169,6.79915688888351,7.06022261101994,5.30664144703975,7.60437899670719,6.03604292435444,4.49479235855436,4.92993673517493,5.45636955078326,6.66811167796303,7.18482820858104,7.13764115715709,7.82963211526283,6.32955356577908,4.4573002810104,6.74408063405482,6.67621331852499,4.79643174886684,5.27012530325851,6.00763716030903,6.40247905054704,3.94604567156764,5.56796866768033,3.36685362994643,6.52492599682958,8.66839444904958,4.09231043169689,5.88759996506671,5.98010494041538,6.74488560432454,8.88940112092552,3.65280791882107,3.25190164517034,3.30887128679273,3.47801753430632
|phase1_expression=14.8938427807458,4.88565570695105,7.27998783023258,4.23449895829562,4.50806156951712,2.51818907867835,4.43864017131499,0.129123323441576,1.267098499365,1.40438715793196,0,0.239316476986009,0.342401459862411,0.34968160967599,0.666219523631325,0.404950534779652,0,0.630924330716475,0.548457734422955,0.42438965179803,3.656861476496,1.78723712161594,1.04479915655574,2.3998863419011,2.75291137280604,6.89078356938024,3.87685796543167,3.44753972297422,3.23039813075836,3.2763916868791,2.66076612786366,3.17515336729816,3.69038872550742,0,4.62162591602039,5.98444723290572,6.53341940039581,1.67412652294763,1.5626706890476,2.61761871986899,0.588231488031014,0.683045484958446,4.36959317728038,3.9028013572429,4.1564541800001,5.50640256485045,3.9119567217402,2.39827672018491,2.63623419281366,4.27745777963423,2.93971485413261,5.75010257459886,0.167782606057736,0.725362142011344,0.336093799142464,4.11615097657515,3.15186783932632,5.15672092277442,17.8038485556446,16.9277113367051,15.2119536841483,1.69422266034566,4.4464739805557,0.449949858640699,0,0.7104801149461,2.69640099466564,1.15265491596466,16.7977171939734,14.3106294631592,13.2504725651371,12.2829923293636,10.3808214247258,16.6587486932338,14.8560480078266,16.5459381589804,6.60695285996332,3.19218345212969,3.5329502648936,16.353899678544,18.1145534332771,17.1901412283731,4.18774498502071,5.6276261003168,5.04234217663473,10.9012576625257,12.6710795911202,16.7759501242771,1.81742863999642,4.1564358058732,6.37701875143691,0.860423876981386,0,1.61910957491345,1.29955283489534,1.34408066129201,2.52799956237153,3.74946709671727,4.93593408745451,7.77347063922748,14.3660288172214,10.2661181931454,22.9324715735981,7.11066703153331,2.59789249213457,1.77351905832569,1.51657333504435,1.94112595522402,4.14300613835475,2.82040064223167,7.11289839741157,6.39377504455497,5.5347719341454,6.0289056221049,4.8211369925639,3.01599819191221,1.48316980640624,1.73519228303894,3.5384422077995,4.52947179852746,2.65009822152472,3.87900202508178,1.86391761218122,3.51336956413857,3.56059401582874,2.29911349687732,2.87556298814209,5.99902730993408,3.81210681219194,4.34392854273986,3.20250421973039,11.6858547464964,1.91206752211504,2.55715457330331,2.49345653471472,3.24482526135515,5.19380755636613,4.97627882440372,7.83440551144392,1.68353484709179,14.053007839972,12.644615743841,9.72335500948886,13.7141384230501,11.0899493616664,12.4270308676304,13.3056448874815,3.3631438196072,14.6586235194333,15.3175924935934,16.1875034230833,8.98702502953057,10.5657954705727,3.48252166522167,6.79081050146213,11.7430217422911,4.91549231119264,5.1469581422943,3.9782889915383,6.42089894860056,4.92504725960302,6.12211008967451,7.57583153872673,6.09969118416952,6.78775296704464,4.65067889500816,5.36546802799238,3.73649095574942,3.45575684818309,3.77585167381919,3.16168357228837,2.92399974850665,2.85415149878366,2.81833479396781,3.36463917702604,10.9078889122042,1.65209391491899,0.793351699990633,9.81125952462076,8.36052018697579,5.67016829817211,5.44545516483025,5.55945109612176,3.42406127002606,4.2707615539006,3.29397909448022,3.2673577144035,2.58643413653496,4.09424582950152,3.59527763461689,2.80979464837102,2.58883655230677,12.8974172648096,9.82537208443668,11.270773567308,12.2190796707189,9.89157684554891,9.11765658574141,6.5133633237985,3.98547399544926,3.61097074035162,3.57851775373222,1.77871576252289,1.66845105716094,2.35870794135844,2.02375901146368,1.62288097110802,2.17059443777175,1.78238096246994,2.30156909960649,1.62135226775035,1.92192989231657,4.31304619582064,3.72140947668503,2.49630138491648,1.26289438973556,1.07638448113147,2.8946611281802,2.58654466233247,14.9698215298683,10.9186534216157,9.50572480341054,10.0916806764056,6.53274404023081,5.2369600994923,5.07347484430277,7.72412206120336,6.2010113101657,5.26200736569707,3.76885623846197,4.14443956478149,2.74833211304872,0,2.17562273527484,2.45882136509518,1.10374698521893,4.0137647496948,4.33683240391152,9.18035694109382,1.76729649043061,11.6738041184015,7.41833614163613,17.2338718186239,10.2756583119597,10.6943363559549,9.34152551603147,11.334699646897,9.9366991689846,12.6492088942888,2.89189184779626,5.53566332312248,8.01295216502649,6.8412522928502,4.78413356620353,0,8.25454162926937,7.25576536715402,2.64047111658257,3.54362271456927,4.30409207121498,1.80899805217755,3.99887102425256,3.92147116223193,2.21225730555071,0,0,1.70219802876894,12.2441543941291,8.40831444587904,8.3591443662321,7.80297028026004,9.0968096977056,8.88564711251453,3.04464949114599,0.938686832254841,0.847328283455281,1.98475558249466,1.81374878235628,2.58343082713449,2.89502039655148,1.67121281604391,1.47726809770555,2.62332752966866,2.96680483216816,1.87957968877638,8.87463532241857,5.74103034846106,1.88368457004691,1.0935538217682,2.0590035588587,3.22959016988325,3.07893195112048,2.9021994498929,2.86401185404534,10.597255784968,8.94605655358134,7.12835249423888,3.97267762427491,4.58561383866973,4.31565908431426,4.21532624199213,1.57053565190418,2.98114438571124,3.10669656543463,9.01908701894705,10.6156747691225,10.9202603701684,8.94475466382619,10.074466231263,10.644235905919,11.0315804327009,20.0514752659683,21.391306262845,13.7702948870823,12.0972602628303,2.52808896502543,6.28448167399509,4.82741498674688,3.11809975146708,3.04345382634718,2.38417625737518,1.80293174279953,1.62458479892035,1.21159739937777,1.905170166375,2.01652370273681,1.75424185331554,1.44317762460494,2.22066114144981,2.49403421976732,1.33191572024439,0.717710852875806,1.00730769818447,3.47741269257943,3.56596703357246,4.02933573387983,1.50057865355346,2.00628841614145,2.25900737046827,1.84130094602871,1.71868654031819,2.23409137046794,2.05524755931193,1.5107877947794,2.02506750069542,3.15224842256954,2.71885445390523,1.55328093525546,15.4643147900423,15.1629451892392,10.5854835567563,9.48116196566347,8.38452650511929,5.33146174505041,7.11189528965169,6.79915688888351,7.06022261101994,5.30664144703975,7.60437899670719,6.03604292435444,4.49479235855436,4.92993673517493,5.45636955078326,6.66811167796303,7.18482820858104,7.13764115715709,7.82963211526283,6.32955356577908,4.4573002810104,6.74408063405482,6.67621331852499,4.79643174886684,5.27012530325851,6.00763716030903,6.40247905054704,3.94604567156764,5.56796866768033,3.36685362994643,6.52492599682958,8.66839444904958,4.09231043169689,5.88759996506671,5.98010494041538,6.74488560432454,8.88940112092552,3.65280791882107,3.25190164517034,3.30887128679273,3.47801753430632
|short_description=p2@Prkra
|short_description=p2@Prkra
}}
}}

Revision as of 12:22, 14 November 2012

Short description:p2@Prkra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prkra_5end
Coexpression cluster:MCL_coexpression_mm9:425
Association with transcript: 2bp_to_NM_011871, uc008kff.1_5end
EntrezGene:Prkra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prkra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C317.80
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.78
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C57.11
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F111.69
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C614.05
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C611.09
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G813.31
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E214.66
forelimb, embryo E12.CNhs10600.359-14H215.32
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A88.99
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E54.65
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G110.91
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D85.67
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I912.90
kidney, embryo E15.CNhs10997.434-16F89.83
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I212.22
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G79.12
kidney, neonate N10.CNhs11206.758-6D56.51
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G214.97
lung, embryo E14.CNhs10604.404-26F810.92
lung, embryo E15.CNhs11020.432-17C59.51
lung, embryo E16.CNhs10998.458-17B610.09
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C78.41
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F25.74
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E310.60
stomach, embryo E15.CNhs10603.1252-16G88.95
stomach, embryo E16.CNhs11022.459-17D47.13
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F510.62
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I510.07
testis, embryo E18.CNhs11027.503-18G510.64
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I420.05
testis, neonate N10.CNhs11204.763-44D921.39
testis, neonate N20.CNhs11110.839-18H313.77
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I815.46
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H210.59
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.33e-1433
neuronal stem cell6.33e-1433
neuroblast6.33e-1433
electrically signaling cell6.33e-1433
electrically responsive cell1.67e-1239
electrically active cell1.67e-1239
ectodermal cell7.18e-1044
neurectodermal cell7.18e-1044
CNS neuron (sensu Vertebrata)1.58e-0923
neuroblast (sensu Vertebrata)1.58e-0923
neural cell2.24e-0943
embryonic cell6.94e-0770







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:76486028..76486048,-&oldid=2319109"