FFCP PHASE1:Mm9::chr3:129763756..129763767,-: Difference between revisions
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|id=chr3:129763756..129763767,- | |id=chr3:129763756..129763767,- | ||
|ontology_enrichment_celltype=CL:0000540!1.20e-14!33;CL:0000047!1.20e-14!33;CL:0000031!1.20e-14!33;CL:0000404!1.20e-14!33;CL:0002319!2.64e-11!43;CL:0000393!3.49e-11!39;CL:0000211!3.49e-11!39;CL:0000221!3.87e-11!44;CL:0000133!3.87e-11!44;CL:0000117!3.28e-10!23;CL:0000337!3.28e-10!23;CL:0000055!2.62e-08!50 | |ontology_enrichment_celltype=CL:0000540!1.20e-14!33;CL:0000047!1.20e-14!33;CL:0000031!1.20e-14!33;CL:0000404!1.20e-14!33;CL:0002319!2.64e-11!43;CL:0000393!3.49e-11!39;CL:0000211!3.49e-11!39;CL:0000221!3.87e-11!44;CL:0000133!3.87e-11!44;CL:0000117!3.28e-10!23;CL:0000337!3.28e-10!23;CL:0000055!2.62e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.62e-17,33;CL:0000047,3.62e-17,33;CL:0000031,3.62e-17,33;CL:0000404,3.62e-17,33;CL:0002319,9.25e-13,43;CL:0000393,1.33e-12,39;CL:0000211,1.33e-12,39;CL:0000221,3.51e-12,44;CL:0000133,3.51e-12,44;CL:0000117,5.29e-12,23;CL:0000337,5.29e-12,23;CL:0000107,2.28e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.19e-15!102;UBERON:0000924!1.19e-15!102;UBERON:0006601!1.19e-15!102;UBERON:0001017!1.18e-14!73;UBERON:0005743!1.18e-14!73;UBERON:0000073!2.37e-14!75;UBERON:0001016!2.37e-14!75;UBERON:0002346!2.59e-12!71;UBERON:0003075!2.59e-12!71;UBERON:0007284!2.59e-12!71;UBERON:0000033!1.79e-09!63;UBERON:0003056!4.58e-09!49;UBERON:0001049!9.32e-09!52;UBERON:0005068!9.32e-09!52;UBERON:0006241!9.32e-09!52;UBERON:0007135!9.32e-09!52;UBERON:0000153!2.32e-08!94;UBERON:0002020!3.32e-08!34;UBERON:0000468!4.28e-08!333;UBERON:0000955!1.79e-07!50;UBERON:0006238!1.79e-07!50;UBERON:0007811!2.56e-07!86;UBERON:0002616!3.41e-07!49;UBERON:0000922!7.02e-07!328 | |ontology_enrichment_uberon=UBERON:0004121!1.19e-15!102;UBERON:0000924!1.19e-15!102;UBERON:0006601!1.19e-15!102;UBERON:0001017!1.18e-14!73;UBERON:0005743!1.18e-14!73;UBERON:0000073!2.37e-14!75;UBERON:0001016!2.37e-14!75;UBERON:0002346!2.59e-12!71;UBERON:0003075!2.59e-12!71;UBERON:0007284!2.59e-12!71;UBERON:0000033!1.79e-09!63;UBERON:0003056!4.58e-09!49;UBERON:0001049!9.32e-09!52;UBERON:0005068!9.32e-09!52;UBERON:0006241!9.32e-09!52;UBERON:0007135!9.32e-09!52;UBERON:0000153!2.32e-08!94;UBERON:0002020!3.32e-08!34;UBERON:0000468!4.28e-08!333;UBERON:0000955!1.79e-07!50;UBERON:0006238!1.79e-07!50;UBERON:0007811!2.56e-07!86;UBERON:0002616!3.41e-07!49;UBERON:0000922!7.02e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.09e-16,95;UBERON:0000924,9.09e-16,95;UBERON:0006601,9.09e-16,95;UBERON:0001017,3.95e-15,73;UBERON:0001016,3.19e-14,75;UBERON:0002346,4.39e-13,64;UBERON:0003075,4.39e-13,64;UBERON:0007284,4.39e-13,64;UBERON:0010371,1.96e-11,73;UBERON:0010314,1.11e-09,92;UBERON:0000073,6.24e-09,54;UBERON:0001049,1.43e-08,52;UBERON:0005068,1.43e-08,52;UBERON:0006241,1.43e-08,52;UBERON:0007135,1.43e-08,52;UBERON:0003056,2.62e-08,49;UBERON:0002020,8.21e-08,34;UBERON:0002410,2.28e-07,9 | |||
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| ||
|short_description=p5@Sec24b | |short_description=p5@Sec24b | ||
}} | }} |
Revision as of 14:59, 14 November 2012
Short description: | p5@Sec24b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sec24b_5end |
Coexpression cluster: | MCL_coexpression_mm9:425 |
Association with transcript: | 57bp_to_ENSMUST00000001079, ENSMUST00000098616, NM_207209, uc008rit.1_5end |
EntrezGene: | Sec24b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.62e-17 | 33 |
neuronal stem cell | 3.62e-17 | 33 |
neuroblast | 3.62e-17 | 33 |
electrically signaling cell | 3.62e-17 | 33 |
neural cell | 9.25e-13 | 43 |
electrically responsive cell | 1.33e-12 | 39 |
electrically active cell | 1.33e-12 | 39 |
ectodermal cell | 3.51e-12 | 44 |
neurectodermal cell | 3.51e-12 | 44 |
CNS neuron (sensu Vertebrata) | 5.29e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.29e-12 | 23 |
autonomic neuron | 2.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.09e-16 | 95 |
ectoderm | 9.09e-16 | 95 |
presumptive ectoderm | 9.09e-16 | 95 |
central nervous system | 3.95e-15 | 73 |
nervous system | 3.19e-14 | 75 |
neurectoderm | 4.39e-13 | 64 |
neural plate | 4.39e-13 | 64 |
presumptive neural plate | 4.39e-13 | 64 |
ecto-epithelium | 1.96e-11 | 73 |
structure with developmental contribution from neural crest | 1.11e-09 | 92 |
regional part of nervous system | 6.24e-09 | 54 |
neural tube | 1.43e-08 | 52 |
neural rod | 1.43e-08 | 52 |
future spinal cord | 1.43e-08 | 52 |
neural keel | 1.43e-08 | 52 |
pre-chordal neural plate | 2.62e-08 | 49 |
gray matter | 8.21e-08 | 34 |
autonomic nervous system | 2.28e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.