FFCP PHASE1:Mm9::chr6:5739540..5739543,+: Difference between revisions
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|id=chr6:5739540..5739543,+ | |id=chr6:5739540..5739543,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!9.50e-14!50;UBERON:0006238!9.50e-14!50;UBERON:0000033!1.18e-13!63;UBERON:0002616!5.93e-13!49;UBERON:0001049!1.93e-11!52;UBERON:0005068!1.93e-11!52;UBERON:0006241!1.93e-11!52;UBERON:0007135!1.93e-11!52;UBERON:0003056!6.44e-11!49;UBERON:0002021!5.25e-10!10;UBERON:0000411!5.25e-10!10;UBERON:0001950!5.25e-10!10;UBERON:0002346!6.17e-10!71;UBERON:0003075!6.17e-10!71;UBERON:0007284!6.17e-10!71;UBERON:0003080!7.92e-10!40;UBERON:0002780!3.09e-09!39;UBERON:0001890!3.09e-09!39;UBERON:0006240!3.09e-09!39;UBERON:0000956!3.79e-09!21;UBERON:0001869!3.79e-09!21;UBERON:0000203!3.79e-09!21;UBERON:0002791!6.86e-09!29;UBERON:0003528!6.86e-09!29;UBERON:0001893!6.86e-09!29;UBERON:0007811!1.06e-08!86;UBERON:0001017!1.16e-08!73;UBERON:0005743!1.16e-08!73;UBERON:0002020!1.40e-08!34;UBERON:0000073!1.47e-08!75;UBERON:0001016!1.47e-08!75;UBERON:0000153!2.32e-08!94 | |ontology_enrichment_uberon=UBERON:0000955!9.50e-14!50;UBERON:0006238!9.50e-14!50;UBERON:0000033!1.18e-13!63;UBERON:0002616!5.93e-13!49;UBERON:0001049!1.93e-11!52;UBERON:0005068!1.93e-11!52;UBERON:0006241!1.93e-11!52;UBERON:0007135!1.93e-11!52;UBERON:0003056!6.44e-11!49;UBERON:0002021!5.25e-10!10;UBERON:0000411!5.25e-10!10;UBERON:0001950!5.25e-10!10;UBERON:0002346!6.17e-10!71;UBERON:0003075!6.17e-10!71;UBERON:0007284!6.17e-10!71;UBERON:0003080!7.92e-10!40;UBERON:0002780!3.09e-09!39;UBERON:0001890!3.09e-09!39;UBERON:0006240!3.09e-09!39;UBERON:0000956!3.79e-09!21;UBERON:0001869!3.79e-09!21;UBERON:0000203!3.79e-09!21;UBERON:0002791!6.86e-09!29;UBERON:0003528!6.86e-09!29;UBERON:0001893!6.86e-09!29;UBERON:0007811!1.06e-08!86;UBERON:0001017!1.16e-08!73;UBERON:0005743!1.16e-08!73;UBERON:0002020!1.40e-08!34;UBERON:0000073!1.47e-08!75;UBERON:0001016!1.47e-08!75;UBERON:0000153!2.32e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.08e-23,10;UBERON:0000411,1.08e-23,10;UBERON:0001950,1.08e-23,10;UBERON:0002619,5.13e-17,17;UBERON:0000073,1.07e-14,54;UBERON:0000956,1.67e-13,21;UBERON:0001869,1.67e-13,21;UBERON:0000203,1.67e-13,21;UBERON:0000955,2.52e-13,47;UBERON:0006238,2.52e-13,47;UBERON:0001017,9.98e-12,73;UBERON:0001049,1.35e-11,52;UBERON:0005068,1.35e-11,52;UBERON:0006241,1.35e-11,52;UBERON:0007135,1.35e-11,52;UBERON:0002020,1.48e-11,34;UBERON:0002616,1.55e-11,46;UBERON:0003528,1.63e-11,29;UBERON:0002791,1.63e-11,29;UBERON:0001893,1.63e-11,29;UBERON:0001016,2.49e-11,75;UBERON:0002346,2.07e-10,64;UBERON:0003075,2.07e-10,64;UBERON:0007284,2.07e-10,64;UBERON:0002780,8.27e-10,39;UBERON:0001890,8.27e-10,39;UBERON:0006240,8.27e-10,39;UBERON:0003080,1.62e-09,40;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0003056,6.54e-09,49;UBERON:0010371,8.78e-09,73 | |||
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| ||
|short_description=p@chr6:5739540..5739543,+ | |short_description=p@chr6:5739540..5739543,+ | ||
}} | }} |
Revision as of 06:10, 14 November 2012
Short description: | p@chr6:5739540..5739543, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:5739540..5739543, + |
Coexpression cluster: | MCL_coexpression_mm9:624 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.08e-23 | 10 |
visual cortex | 1.08e-23 | 10 |
neocortex | 1.08e-23 | 10 |
regional part of cerebral cortex | 5.13e-17 | 17 |
regional part of nervous system | 1.07e-14 | 54 |
cerebral cortex | 1.67e-13 | 21 |
cerebral hemisphere | 1.67e-13 | 21 |
pallium | 1.67e-13 | 21 |
brain | 2.52e-13 | 47 |
future brain | 2.52e-13 | 47 |
central nervous system | 9.98e-12 | 73 |
neural tube | 1.35e-11 | 52 |
neural rod | 1.35e-11 | 52 |
future spinal cord | 1.35e-11 | 52 |
neural keel | 1.35e-11 | 52 |
gray matter | 1.48e-11 | 34 |
regional part of brain | 1.55e-11 | 46 |
brain grey matter | 1.63e-11 | 29 |
regional part of telencephalon | 1.63e-11 | 29 |
telencephalon | 1.63e-11 | 29 |
nervous system | 2.49e-11 | 75 |
neurectoderm | 2.07e-10 | 64 |
neural plate | 2.07e-10 | 64 |
presumptive neural plate | 2.07e-10 | 64 |
regional part of forebrain | 8.27e-10 | 39 |
forebrain | 8.27e-10 | 39 |
future forebrain | 8.27e-10 | 39 |
anterior neural tube | 1.62e-09 | 40 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
pre-chordal neural plate | 6.54e-09 | 49 |
ecto-epithelium | 8.78e-09 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.