FFCP PHASE1:Mm9::chr16:18392647..18392715,+: Difference between revisions
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|id=chr16:18392647..18392715,+ | |id=chr16:18392647..18392715,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.22e-17!44;CL:0000133!2.22e-17!44;CL:0002319!8.95e-17!43;CL:0000055!1.28e-16!50;CL:0000540!9.34e-13!33;CL:0000047!9.34e-13!33;CL:0000031!9.34e-13!33;CL:0000404!9.34e-13!33;CL:0000393!5.15e-12!39;CL:0000211!5.15e-12!39;CL:0000107!2.98e-07!9;CL:0000117!4.28e-07!23;CL:0000337!4.28e-07!23;CL:0002453!9.93e-07!8 | |ontology_enrichment_celltype=CL:0000221!2.22e-17!44;CL:0000133!2.22e-17!44;CL:0002319!8.95e-17!43;CL:0000055!1.28e-16!50;CL:0000540!9.34e-13!33;CL:0000047!9.34e-13!33;CL:0000031!9.34e-13!33;CL:0000404!9.34e-13!33;CL:0000393!5.15e-12!39;CL:0000211!5.15e-12!39;CL:0000107!2.98e-07!9;CL:0000117!4.28e-07!23;CL:0000337!4.28e-07!23;CL:0002453!9.93e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.18e-17,44;CL:0000133,2.18e-17,44;CL:0002319,8.79e-17,43;CL:0000540,9.21e-13,33;CL:0000047,9.21e-13,33;CL:0000031,9.21e-13,33;CL:0000404,9.21e-13,33;CL:0000393,5.09e-12,39;CL:0000211,5.09e-12,39;CL:0000107,2.96e-07,9;CL:0000117,4.25e-07,23;CL:0000337,4.25e-07,23;CL:0002453,9.87e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.04e-11!102;UBERON:0000924!5.04e-11!102;UBERON:0006601!5.04e-11!102;UBERON:0001017!4.43e-09!73;UBERON:0005743!4.43e-09!73;UBERON:0000073!1.42e-08!75;UBERON:0001016!1.42e-08!75;UBERON:0002410!2.98e-07!9 | |ontology_enrichment_uberon=UBERON:0004121!5.04e-11!102;UBERON:0000924!5.04e-11!102;UBERON:0006601!5.04e-11!102;UBERON:0001017!4.43e-09!73;UBERON:0005743!4.43e-09!73;UBERON:0000073!1.42e-08!75;UBERON:0001016!1.42e-08!75;UBERON:0002410!2.98e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.02e-10,95;UBERON:0000924,3.02e-10,95;UBERON:0006601,3.02e-10,95;UBERON:0010314,1.12e-09,92;UBERON:0001017,4.40e-09,73;UBERON:0001016,1.41e-08,75;UBERON:0002410,2.96e-07,9;UBERON:0000922,3.60e-07,320 | |||
|phase1_expression=14.4133962394315,1.04692622291808,1.36499771816861,0.60492842261366,1.00179145989269,3.18970616632591,3.27057696833736,1.67860320474049,1.83025338797167,1.40438715793196,1.71217968225505,0.797721589953364,0.856003649656029,1.74840804837995,6.66219523631325,4.45445588257617,4.19737126876888,2.05050407482854,1.64537320326887,0.84877930359606,6.37824676133023,5.16312946244604,2.08959831311148,1.11994695955385,1.14704640533585,0.57423196411502,1.7230479846363,0.215471232685889,0.570070258369122,0.252030129759931,1.10865255327652,14.6057054895715,14.7615549020297,15.8481681015439,2.88851619751275,3.32469290716985,3.47087905646027,0,0.7813353445238,0.523523743973798,0,0,0.971020706062307,7.93149953246137,8.71841608487825,3.85448179539531,43.8139152834902,196.876716211543,152.681897000458,124.435135407541,55.2946365420182,145.190090008621,1.34226084846189,1.45072428402269,0,6.17422646486273,12.8940047972441,18.5641953219879,42.2841403196559,29.0945038599618,39.2975470173831,22.0248945844936,19.5644855144451,3.5995988691256,1.97773272513395,2.8419204597844,58.1224214405705,163.292779761661,23.9523004432583,21.3309382564071,23.135745748652,20.2812198926701,23.1911967999194,22.7832886539815,28.7536413054709,26.6573448116906,7.70811166995721,4.59674417106676,5.37622866396852,33.2353445080089,30.5568729632048,28.6502353806218,5.02529398202486,6.19038871034848,7.48711414106369,24.7488011797881,19.362548588678,30.9423080069999,4.01348824665875,6.12129636864963,6.95674772884027,42.1607699720879,0,0,4.54843492213368,0.896053774194671,5.19644354487482,1.1930122580464,1.03914401841148,2.47337702157238,34.2249510057334,0,0,0,3.89683873820185,2.28023878927589,6.0662933401774,2.39786147410026,0.517875767294343,10.3909497345377,11.9704875468634,8.52503339273995,7.84092690670599,8.59119051149949,10.8181610564848,11.3099932196708,6.42706916109372,1.73519228303894,5.30766331169925,9.70601099684455,9.49618529379692,5.33362778448744,1.86391761218122,4.39171195517321,4.60782754989601,2.55457055208591,1.07833612055328,1.19980546198682,0.889491589511453,5.24267237916879,4.57500602818627,16.712028831011,2.08589184230732,2.30143911597297,4.98691306942944,6.16516799657479,7.33243419722277,6.96679035416521,12.8888606801174,7.78634866779954,18.0867415718158,20.4612872945791,19.2666478891724,16.1254155084215,31.1607166113082,21.1387638470002,26.0490794276046,6.98499100995342,16.383167462896,11.535470890237,9.50136070485324,8.76782929710299,8.06337022754234,7.66154766348766,9.05441400194951,11.9420560091096,0,0.257347907114715,1.13665399758237,12.2204205795946,11.4917769390737,12.7844063637321,22.0172604094246,15.1508458445501,13.7297730469767,16.0448421877781,16.3646774853768,11.4430035519826,13.8230273927324,9.68588038066662,6.4044359541226,8.04099930839328,7.46470391989572,6.30770168173747,3.15434922846191,8.02655976558419,0.660837565967596,1.85115396664481,12.797295032114,12.0763069367428,9.79392706047909,7.26060688644033,5.11469500843202,3.80451252225118,5.69434873853414,3.95277491337626,4.52403375840485,4.37704238490532,3.70431765526328,2.69645822596266,1.94524244887225,1.59313018603494,8.34538764193559,6.740662243974,13.5249282807697,7.73875045812194,6.40043207653165,8.20589092716727,14.2914573900821,15.3514553898786,15.071877872772,11.9695249004147,3.85388415213294,4.17112764290235,7.86235980452812,4.49724224769707,8.31726497692862,5.54707467430559,6.11102044275408,5.75392274901621,11.8358715545776,7.96228098245436,5.75072826109418,11.5363693777236,10.2972432127805,9.59799736199025,4.4849353380478,7.71909634181387,6.28160846566456,9.85355341206521,7.33342393989116,7.63852885988347,6.33663670378956,8.20780661464897,2.85652369063216,8.97614780145875,7.09358148477859,9.08005227559977,15.1482030224613,12.6174752331118,14.6782234586011,12.2951699794285,0,0,2.95058563811422,1.37968373152366,3.85321415970701,5.15731421005694,1.3114795630134,7.06918596172244,83.9251863647243,72.2311676948781,83.3688549225932,80.2935161120575,63.0520247653175,73.5998980050964,84.200625948378,82.7084077889013,83.801008924663,9.3183181762324,2.83880170416537,6.23229612835393,9.93610452056814,15.6721616823909,0,11.8962511715941,9.06970670894253,5.09233715340925,8.85905678642318,4.91896236710284,5.94385074286909,6.90714086007261,6.77345018930971,5.68866164284469,3.16255825724996,4.12542172992747,6.12791290356818,19.9867814374754,27.6827583295095,20.1476812929697,17.5566831305851,16.0531935841863,13.9866667511803,21.0080814889074,27.4565898434541,16.3110694565142,11.688005096913,7.09010887648364,15.5005849628069,8.98662581429522,9.90790455226033,7.55048138827282,2.91480836629851,6.48988557036784,6.83483523191411,23.1153292118809,21.6677597022563,9.23005439322986,8.33834789098253,7.77845788902177,2.20971958992012,4.05859211738608,3.59319931891502,0.954670618015114,12.6534397432454,9.55601495496189,7.34436317588249,4.80903080833278,5.8957892211468,4.98998081623837,6.4469695465762,3.66458318777641,3.49960427887841,3.10669656543463,0.56369293868419,8.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|phase1_expression=14.4133962394315,1.04692622291808,1.36499771816861,0.60492842261366,1.00179145989269,3.18970616632591,3.27057696833736,1.67860320474049,1.83025338797167,1.40438715793196,1.71217968225505,0.797721589953364,0.856003649656029,1.74840804837995,6.66219523631325,4.45445588257617,4.19737126876888,2.05050407482854,1.64537320326887,0.84877930359606,6.37824676133023,5.16312946244604,2.08959831311148,1.11994695955385,1.14704640533585,0.57423196411502,1.7230479846363,0.215471232685889,0.570070258369122,0.252030129759931,1.10865255327652,14.6057054895715,14.7615549020297,15.8481681015439,2.88851619751275,3.32469290716985,3.47087905646027,0,0.7813353445238,0.523523743973798,0,0,0.971020706062307,7.93149953246137,8.71841608487825,3.85448179539531,43.8139152834902,196.876716211543,152.681897000458,124.435135407541,55.2946365420182,145.190090008621,1.34226084846189,1.45072428402269,0,6.17422646486273,12.8940047972441,18.5641953219879,42.2841403196559,29.0945038599618,39.2975470173831,22.0248945844936,19.5644855144451,3.5995988691256,1.97773272513395,2.8419204597844,58.1224214405705,163.292779761661,23.9523004432583,21.3309382564071,23.135745748652,20.2812198926701,23.1911967999194,22.7832886539815,28.7536413054709,26.6573448116906,7.70811166995721,4.59674417106676,5.37622866396852,33.2353445080089,30.5568729632048,28.6502353806218,5.02529398202486,6.19038871034848,7.48711414106369,24.7488011797881,19.362548588678,30.9423080069999,4.01348824665875,6.12129636864963,6.95674772884027,42.1607699720879,0,0,4.54843492213368,0.896053774194671,5.19644354487482,1.1930122580464,1.03914401841148,2.47337702157238,34.2249510057334,0,0,0,3.89683873820185,2.28023878927589,6.0662933401774,2.39786147410026,0.517875767294343,10.3909497345377,11.9704875468634,8.52503339273995,7.84092690670599,8.59119051149949,10.8181610564848,11.3099932196708,6.42706916109372,1.73519228303894,5.30766331169925,9.70601099684455,9.49618529379692,5.33362778448744,1.86391761218122,4.39171195517321,4.60782754989601,2.55457055208591,1.07833612055328,1.19980546198682,0.889491589511453,5.24267237916879,4.57500602818627,16.712028831011,2.08589184230732,2.30143911597297,4.98691306942944,6.16516799657479,7.33243419722277,6.96679035416521,12.8888606801174,7.78634866779954,18.0867415718158,20.4612872945791,19.2666478891724,16.1254155084215,31.1607166113082,21.1387638470002,26.0490794276046,6.98499100995342,16.383167462896,11.535470890237,9.50136070485324,8.76782929710299,8.06337022754234,7.66154766348766,9.05441400194951,11.9420560091096,0,0.257347907114715,1.13665399758237,12.2204205795946,11.4917769390737,12.7844063637321,22.0172604094246,15.1508458445501,13.7297730469767,16.0448421877781,16.3646774853768,11.4430035519826,13.8230273927324,9.68588038066662,6.4044359541226,8.04099930839328,7.46470391989572,6.30770168173747,3.15434922846191,8.02655976558419,0.660837565967596,1.85115396664481,12.797295032114,12.0763069367428,9.79392706047909,7.26060688644033,5.11469500843202,3.80451252225118,5.69434873853414,3.95277491337626,4.52403375840485,4.37704238490532,3.70431765526328,2.69645822596266,1.94524244887225,1.59313018603494,8.34538764193559,6.740662243974,13.5249282807697,7.73875045812194,6.40043207653165,8.20589092716727,14.2914573900821,15.3514553898786,15.071877872772,11.9695249004147,3.85388415213294,4.17112764290235,7.86235980452812,4.49724224769707,8.31726497692862,5.54707467430559,6.11102044275408,5.75392274901621,11.8358715545776,7.96228098245436,5.75072826109418,11.5363693777236,10.2972432127805,9.59799736199025,4.4849353380478,7.71909634181387,6.28160846566456,9.85355341206521,7.33342393989116,7.63852885988347,6.33663670378956,8.20780661464897,2.85652369063216,8.97614780145875,7.09358148477859,9.08005227559977,15.1482030224613,12.6174752331118,14.6782234586011,12.2951699794285,0,0,2.95058563811422,1.37968373152366,3.85321415970701,5.15731421005694,1.3114795630134,7.06918596172244,83.9251863647243,72.2311676948781,83.3688549225932,80.2935161120575,63.0520247653175,73.5998980050964,84.200625948378,82.7084077889013,83.801008924663,9.3183181762324,2.83880170416537,6.23229612835393,9.93610452056814,15.6721616823909,0,11.8962511715941,9.06970670894253,5.09233715340925,8.85905678642318,4.91896236710284,5.94385074286909,6.90714086007261,6.77345018930971,5.68866164284469,3.16255825724996,4.12542172992747,6.12791290356818,19.9867814374754,27.6827583295095,20.1476812929697,17.5566831305851,16.0531935841863,13.9866667511803,21.0080814889074,27.4565898434541,16.3110694565142,11.688005096913,7.09010887648364,15.5005849628069,8.98662581429522,9.90790455226033,7.55048138827282,2.91480836629851,6.48988557036784,6.83483523191411,23.1153292118809,21.6677597022563,9.23005439322986,8.33834789098253,7.77845788902177,2.20971958992012,4.05859211738608,3.59319931891502,0.954670618015114,12.6534397432454,9.55601495496189,7.34436317588249,4.80903080833278,5.8957892211468,4.98998081623837,6.4469695465762,3.66458318777641,3.49960427887841,3.10669656543463,0.56369293868419,8.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| ||
|short_description=p1@Arvcf | |short_description=p1@Arvcf | ||
}} | }} |
Revision as of 19:56, 13 November 2012
Short description: | p1@Arvcf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arvcf_5end |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | 0bp_to_ENSMUST00000115610, ENSMUST00000150253, ENSMUST00000163911, uc007ynp.1, uc007ynq.1, uc007ynr.1, uc007yns.1_5end |
EntrezGene: | Arvcf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.18e-17 | 44 |
neurectodermal cell | 2.18e-17 | 44 |
neural cell | 8.79e-17 | 43 |
neuron | 9.21e-13 | 33 |
neuronal stem cell | 9.21e-13 | 33 |
neuroblast | 9.21e-13 | 33 |
electrically signaling cell | 9.21e-13 | 33 |
electrically responsive cell | 5.09e-12 | 39 |
electrically active cell | 5.09e-12 | 39 |
autonomic neuron | 2.96e-07 | 9 |
CNS neuron (sensu Vertebrata) | 4.25e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.25e-07 | 23 |
oligodendrocyte precursor cell | 9.87e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.02e-10 | 95 |
ectoderm | 3.02e-10 | 95 |
presumptive ectoderm | 3.02e-10 | 95 |
structure with developmental contribution from neural crest | 1.12e-09 | 92 |
central nervous system | 4.40e-09 | 73 |
nervous system | 1.41e-08 | 75 |
autonomic nervous system | 2.96e-07 | 9 |
embryo | 3.60e-07 | 320 |
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